Click here to switch to the map view.

The map label for this gene is 78357045

Identifier: 78357045

GI number: 78357045

Start: 2044882

End: 2045457

Strand: Direct

Name: 78357045

Synonym: Dde_2002

Alternate gene names: NA

Gene position: 2044882-2045457 (Clockwise)

Preceding gene: 78357044

Following gene: 78357048

Centisome position: 54.82

GC content: 49.65

Gene sequence:

>576_bases
ATGACAATGACAAAAAAAGACGCGCTGCTGCTGGCAGCGAAGGAACTCTTCGGGGAGTACGGTTACTCTGAAACCACATT
CAAAAAAATTTCCGAACGGGCCGGAGTGGCACTGGGGTTACTGACACACCACTACGGCAACAAAGAAAAGCTGTTCCTCG
CAGCCGGTCTGGACGTGCTGGACAGATTTATAGTCTATCTGCAGGACGCATGTGCCAAGGGTAATAACGGCTACGAATCC
GTCATGAACTTCTGTCGCGCGTATCTTGACTTCTCCATCGACAAAAACGAGCACTTCATGGTTCTTGTACGCTGCTCACC
CTACAGCGATATGAAAACCAAAACAGACCGCGACATAATGTACGAAAAGTTCAATCAGGTCCCACGGGAACTTGAATATC
ATGTCCGCCGCGGCATTGAGGACGGTTCGCTGAAGTCTCTGCCCGCCTACGAAACTACCACGGTTCTCACCTGCAACCTT
GTCGGCTCTATCCGTACAAAACTTCTCACTCCTTATGCCCCCCCTTCTCTTTATGATGATGTGCTGGAATTCATTTCCAG
AAGCATCAAAGCCTGA

Upstream 100 bases:

>100_bases
AAGCATTACAACCTGAGTGAAGAAGAAGTTCAGTAAGAGCGCTTCTTGGGCGTAGGAGCGGTTCTTACCTCCCTGCCAAC
CTAAAAAGACGGGCACTGCT

Downstream 100 bases:

>100_bases
TGATAAAAAAGGGGGTGCCCAAAGCACCCCCTTTTCTTGTAACGCATAAAAACGCGGCGGCTATTTGCGCCTTGTTATAA
CAAGGGGAATACAATGCCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR; Transcription Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTMTKKDALLLAAKELFGEYGYSETTFKKISERAGVALGLLTHHYGNKEKLFLAAGLDVLDRFIVYLQDACAKGNNGYES
VMNFCRAYLDFSIDKNEHFMVLVRCSPYSDMKTKTDRDIMYEKFNQVPRELEYHVRRGIEDGSLKSLPAYETTTVLTCNL
VGSIRTKLLTPYAPPSLYDDVLEFISRSIKA

Sequences:

>Translated_191_residues
MTMTKKDALLLAAKELFGEYGYSETTFKKISERAGVALGLLTHHYGNKEKLFLAAGLDVLDRFIVYLQDACAKGNNGYES
VMNFCRAYLDFSIDKNEHFMVLVRCSPYSDMKTKTDRDIMYEKFNQVPRELEYHVRRGIEDGSLKSLPAYETTTVLTCNL
VGSIRTKLLTPYAPPSLYDDVLEFISRSIKA
>Mature_190_residues
TMTKKDALLLAAKELFGEYGYSETTFKKISERAGVALGLLTHHYGNKEKLFLAAGLDVLDRFIVYLQDACAKGNNGYESV
MNFCRAYLDFSIDKNEHFMVLVRCSPYSDMKTKTDRDIMYEKFNQVPRELEYHVRRGIEDGSLKSLPAYETTTVLTCNLV
GSIRTKLLTPYAPPSLYDDVLEFISRSIKA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21740; Mature: 21609

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTKKDALLLAAKELFGEYGYSETTFKKISERAGVALGLLTHHYGNKEKLFLAAGLDVL
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCHHHH
DRFIVYLQDACAKGNNGYESVMNFCRAYLDFSIDKNEHFMVLVRCSPYSDMKTKTDRDIM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH
YEKFNQVPRELEYHVRRGIEDGSLKSLPAYETTTVLTCNLVGSIRTKLLTPYAPPSLYDD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHCCCCCCHHHHHH
VLEFISRSIKA
HHHHHHHHHCC
>Mature Secondary Structure 
TMTKKDALLLAAKELFGEYGYSETTFKKISERAGVALGLLTHHYGNKEKLFLAAGLDVL
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEECCHHHH
DRFIVYLQDACAKGNNGYESVMNFCRAYLDFSIDKNEHFMVLVRCSPYSDMKTKTDRDIM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHH
YEKFNQVPRELEYHVRRGIEDGSLKSLPAYETTTVLTCNLVGSIRTKLLTPYAPPSLYDD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEEHHHHHHHHHHCCCCCCHHHHHH
VLEFISRSIKA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA