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The map label for this gene is idi [C]

Identifier: 78357034

GI number: 78357034

Start: 2033636

End: 2034190

Strand: Direct

Name: idi [C]

Synonym: Dde_1991

Alternate gene names: 78357034

Gene position: 2033636-2034190 (Clockwise)

Preceding gene: 78357029

Following gene: 78357038

Centisome position: 54.52

GC content: 57.3

Gene sequence:

>555_bases
ATGCGAAAAACAGAAAAAAAAACCGGCAATTCACCAGACGCCGGCACCATGCACCTTGTAGAAGTAGTGGACGCTCTGGG
ACGCCCTCTGCTGGTTATGCCAGCAGAATCGGTCCATCGGCAAGGGCTTAACCATAAAATCATCCTTGTGCTGCTTTACG
ACCTGCAAGGCAGACTGTACCTGCAAAAGCGCGCCGCCTCCAAGACGGTCTACCCCGGCAGATGGGATCTTTCCGCCACA
GGACATGTGCAGGCCGGCGAAGCCGCCATGGACGCAGCCGTACGTGAACTGCGCGAAGAGCTGGGCGTTGAGCCGGTCAG
CATCAAAGAGCTCTGCAGAGTCGCAGCCTGCGCCGAAACCGGCCATGCGTTCACCACCCTGTTCACAACAGGACGCATTT
CAGCCGTCCCTTCTCCCAACCCGGCAGAAGTTGCCGAGGGAATGTTCATCAGTGCGGATGATCTCGATGCTACTGTCAAC
CACTTCGGCGAAATGCTCACTCCGGCTGTCCACTGGGCGTACACCAACGGTTTTCTGTTCCGACGGTCTGCATGA

Upstream 100 bases:

>100_bases
GCAAAGCACATTTTTTCCAGAGCTACAATTTCGGCACTGTCTTCAGCCGAAAGACGATAAAAAACACAACCGGCAGCCAT
AAATCCCTGCGTGATACAAC

Downstream 100 bases:

>100_bases
ACACCACTATACCGCCAGCAGGCCGGCAGCGGCCCCGTGCAGCACCCCGTTGGTAGCCAGAATGCCCAGCGGATCAAACG
CATATGCACTCCGGCCGTCA

Product: isopentenyl-diphosphate delta-isomerase

Products: Dimethylallyl diphosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRKTEKKTGNSPDAGTMHLVEVVDALGRPLLVMPAESVHRQGLNHKIILVLLYDLQGRLYLQKRAASKTVYPGRWDLSAT
GHVQAGEAAMDAAVRELREELGVEPVSIKELCRVAACAETGHAFTTLFTTGRISAVPSPNPAEVAEGMFISADDLDATVN
HFGEMLTPAVHWAYTNGFLFRRSA

Sequences:

>Translated_184_residues
MRKTEKKTGNSPDAGTMHLVEVVDALGRPLLVMPAESVHRQGLNHKIILVLLYDLQGRLYLQKRAASKTVYPGRWDLSAT
GHVQAGEAAMDAAVRELREELGVEPVSIKELCRVAACAETGHAFTTLFTTGRISAVPSPNPAEVAEGMFISADDLDATVN
HFGEMLTPAVHWAYTNGFLFRRSA
>Mature_184_residues
MRKTEKKTGNSPDAGTMHLVEVVDALGRPLLVMPAESVHRQGLNHKIILVLLYDLQGRLYLQKRAASKTVYPGRWDLSAT
GHVQAGEAAMDAAVRELREELGVEPVSIKELCRVAACAETGHAFTTLFTTGRISAVPSPNPAEVAEGMFISADDLDATVN
HFGEMLTPAVHWAYTNGFLFRRSA

Specific function: Catalyzes The 1,3-Allylic Rearrangement Of The Homoallylic Substrate Isopentenyl (Ipp) To Its Highly Electrophilic Allylic Isomer, Dimethylallyl Diphosphate (Dmapp). [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 5.3.3.2 [C]

Molecular weight: Translated: 20041; Mature: 20041

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTEKKTGNSPDAGTMHLVEVVDALGRPLLVMPAESVHRQGLNHKIILVLLYDLQGRLY
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEEEEECCCCEEE
LQKRAASKTVYPGRWDLSATGHVQAGEAAMDAAVRELREELGVEPVSIKELCRVAACAET
EEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GHAFTTLFTTGRISAVPSPNPAEVAEGMFISADDLDATVNHFGEMLTPAVHWAYTNGFLF
CCEEEEEEECCEEEECCCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHEECCCEEE
RRSA
EECC
>Mature Secondary Structure
MRKTEKKTGNSPDAGTMHLVEVVDALGRPLLVMPAESVHRQGLNHKIILVLLYDLQGRLY
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEEEEECCCCEEE
LQKRAASKTVYPGRWDLSATGHVQAGEAAMDAAVRELREELGVEPVSIKELCRVAACAET
EEEHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GHAFTTLFTTGRISAVPSPNPAEVAEGMFISADDLDATVNHFGEMLTPAVHWAYTNGFLF
CCEEEEEEECCEEEECCCCCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHEECCCEEE
RRSA
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.036 {isopentenyl} [C]

Substrates: Isopentenyl diphosphate [C]

Specific reaction: Isopentenyl diphosphate --> Dimethylallyl diphosphate [C]

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: Iodoacetamide; PCMB [C]

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]