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The map label for this gene is yciM [H]

Identifier: 78357018

GI number: 78357018

Start: 2019680

End: 2020819

Strand: Direct

Name: yciM [H]

Synonym: Dde_1975

Alternate gene names: 78357018

Gene position: 2019680-2020819 (Clockwise)

Preceding gene: 78357017

Following gene: 78357019

Centisome position: 54.14

GC content: 58.68

Gene sequence:

>1140_bases
GTGTCATTTCTGTCACGCTTCAAACTGCCCCGCATAAAGCTTCCGGATTTTCTGTCTTCCCCCGGCGACAGAAACATCCT
GACGCCGCCTCAGGGAGAAGACCCCGGAGAGCGTGACAGACGCGCGGCCATCAGTGCGCTCAGCCGGGCAGTCCGCAACG
ACCCCGATTCCGTTGAGATTTATCTCGCCCTGGGCAACCTTTACCGTGCCCAGGGCGACATAGAGCGCGCAGTCCAGTTG
CGCAGCACGCTGATTGCGCGCCCCAGCCTTGAAGACCGCCTGAAGGCCAGAGTGTACTTTGAGCTGGGACACGACTACAA
GCGCGGCGGATTCATCGACCGGGCGCTGCAGGCTTTTGAGCAGGCCAGAAGGTTGAGCGGTGAATCTGACGAAATAACCC
GTGATACGGCAAGGCTCCACGCGGAAAGCGGAAACTTTCTGCAGGCGGCCACACTGTTCGGCAGGCTGGGAATGCGTATC
CCGCAGGCACACTATCTGGTGCGTCACGCGCAGGAGGTCATGCAGTCTCATGGCGAAGCCGAAGCCCGAAAATTTTTGTC
TAAAGCCCTGAAAGCCAATCAGAGCAGCATTGAAGCCCGTCAGGAATTGATAGGCCTGGCCGCGCGCAATGAGGACTGGC
GGGCAACACGCAAGCGGCTGGATGAGGCGCTGAAAACTGTTCCTGCCGACCTGCGCTTTCTTCTGCTGGAAAATCTGCTG
CAGCTTTCGCCTTCCGGCAGCAGCACCGCCACGCGGACCGAAGATTTCCGCGTTCAGCTGTGCAAAGCAGTACTGCCCGT
GCTTGAGGCACAGTCGCCGGATCTTTTGCTGCAATATTACGGCGCGCTGTACCTGCTGCGCTGCAACAATACAGAAACGG
CCAATGCGTGGCTGGCCAAAACCATGGTGCTCAGCCCGGACTTTTGGGCGGCCCGCCTTGCGCTGCTTGATATTGCCATG
AAAGAGCAGCAGCTTTCGCCTGTCTTCAAAAGCCAGCTTGAATTTTTCATTGAGCAGGCACACCATGTGAAAAAGTTTGT
GTGCCGTGCGTGCGGCCTGCACCGCAAAACCACATTCTACCGGTGCCCGCGCTGCCGCAGCTGGCACTCCATTGCGTTCA
GGACCTCGCTGCAGGACTGA

Upstream 100 bases:

>100_bases
CGCTTGAAGAGTCCGCTCAGCTGCCTGCCGCCGAAGAAATGCCTGCACAGCCCGCAGCAGAAAAAACGTCCGCCAACGCT
TAACCACAGCGGAGAATGAT

Downstream 100 bases:

>100_bases
TTTCCCGCATGCGCAAAGCATTGTTCATCAACAATATATTTTAAATTAAATAAAATACATACGATTGTTCATCTGAATAA
ATGACTAGCCATTCTCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSFLSRFKLPRIKLPDFLSSPGDRNILTPPQGEDPGERDRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQL
RSTLIARPSLEDRLKARVYFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGMRI
PQAHYLVRHAQEVMQSHGEAEARKFLSKALKANQSSIEARQELIGLAARNEDWRATRKRLDEALKTVPADLRFLLLENLL
QLSPSGSSTATRTEDFRVQLCKAVLPVLEAQSPDLLLQYYGALYLLRCNNTETANAWLAKTMVLSPDFWAARLALLDIAM
KEQQLSPVFKSQLEFFIEQAHHVKKFVCRACGLHRKTTFYRCPRCRSWHSIAFRTSLQD

Sequences:

>Translated_379_residues
MSFLSRFKLPRIKLPDFLSSPGDRNILTPPQGEDPGERDRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQL
RSTLIARPSLEDRLKARVYFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGMRI
PQAHYLVRHAQEVMQSHGEAEARKFLSKALKANQSSIEARQELIGLAARNEDWRATRKRLDEALKTVPADLRFLLLENLL
QLSPSGSSTATRTEDFRVQLCKAVLPVLEAQSPDLLLQYYGALYLLRCNNTETANAWLAKTMVLSPDFWAARLALLDIAM
KEQQLSPVFKSQLEFFIEQAHHVKKFVCRACGLHRKTTFYRCPRCRSWHSIAFRTSLQD
>Mature_378_residues
SFLSRFKLPRIKLPDFLSSPGDRNILTPPQGEDPGERDRRAAISALSRAVRNDPDSVEIYLALGNLYRAQGDIERAVQLR
STLIARPSLEDRLKARVYFELGHDYKRGGFIDRALQAFEQARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGMRIP
QAHYLVRHAQEVMQSHGEAEARKFLSKALKANQSSIEARQELIGLAARNEDWRATRKRLDEALKTVPADLRFLLLENLLQ
LSPSGSSTATRTEDFRVQLCKAVLPVLEAQSPDLLLQYYGALYLLRCNNTETANAWLAKTMVLSPDFWAARLALLDIAMK
EQQLSPVFKSQLEFFIEQAHHVKKFVCRACGLHRKTTFYRCPRCRSWHSIAFRTSLQD

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=337, Percent_Identity=24.0356083086053, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43127; Mature: 42996

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLSRFKLPRIKLPDFLSSPGDRNILTPPQGEDPGERDRRAAISALSRAVRNDPDSVEI
CCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
YLALGNLYRAQGDIERAVQLRSTLIARPSLEDRLKARVYFELGHDYKRGGFIDRALQAFE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH
QARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGMRIPQAHYLVRHAQEVMQSHGEA
HHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHH
EARKFLSKALKANQSSIEARQELIGLAARNEDWRATRKRLDEALKTVPADLRFLLLENLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QLSPSGSSTATRTEDFRVQLCKAVLPVLEAQSPDLLLQYYGALYLLRCNNTETANAWLAK
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHH
TMVLSPDFWAARLALLDIAMKEQQLSPVFKSQLEFFIEQAHHVKKFVCRACGLHRKTTFY
HHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RCPRCRSWHSIAFRTSLQD
CCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
SFLSRFKLPRIKLPDFLSSPGDRNILTPPQGEDPGERDRRAAISALSRAVRNDPDSVEI
CHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEE
YLALGNLYRAQGDIERAVQLRSTLIARPSLEDRLKARVYFELGHDYKRGGFIDRALQAFE
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH
QARRLSGESDEITRDTARLHAESGNFLQAATLFGRLGMRIPQAHYLVRHAQEVMQSHGEA
HHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHH
EARKFLSKALKANQSSIEARQELIGLAARNEDWRATRKRLDEALKTVPADLRFLLLENLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QLSPSGSSTATRTEDFRVQLCKAVLPVLEAQSPDLLLQYYGALYLLRCNNTETANAWLAK
HCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHH
TMVLSPDFWAARLALLDIAMKEQQLSPVFKSQLEFFIEQAHHVKKFVCRACGLHRKTTFY
HHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
RCPRCRSWHSIAFRTSLQD
CCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]