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The map label for this gene is 78356971

Identifier: 78356971

GI number: 78356971

Start: 1980289

End: 1980873

Strand: Reverse

Name: 78356971

Synonym: Dde_1928

Alternate gene names: NA

Gene position: 1980873-1980289 (Counterclockwise)

Preceding gene: 78356972

Following gene: 78356970

Centisome position: 53.1

GC content: 61.71

Gene sequence:

>585_bases
ATGGTTTCACAGAATTCTTACGACGGCATCGACAAGTATGCCGCCGACCTCATTCGGCACAAAGCACGTCAACTCGTAGG
CAAGGCCGGATTCACCGAGGACGACAGACCCGACCTCGAACAGGAACTGATGATCGATCTGCTGCAGCGGATGCGGCATT
TCAATCCCGCCAAGGCCAAGAAGACCACCTTCATGGCCCGGATCGTCGAACGTCACATCTCCACCATTCTGGAGGCCCGG
TTCGCCCAATGCCGGGACTGGCGGCTCTGCCAAACCTCGCTCAACGAACCCCTCGACAACGGCGAAGGCGACACCACCGA
GCGTATCGACTTCCTGGATGGCGAGGGCTCTCTGGGAGGCGGCACCCGCGAAACAAGGGAGCGCCTCGCCCATGAGATCC
GCATGGATCTCGACCGGGCCATCGCCTCGCTACCGGAGGAGCTCCGGGATCTGTGCGTGCGCCTGCACGACAGCACCATG
GCAGAAATCGCCCGGGAGATGGGCATTCCCAGAACCACCCTCTACGACCGGCTGAGCAAGCTGCGGGAGGCTTTCAGCGA
GGCTGGCCTGACCGACTACCTGTGA

Upstream 100 bases:

>100_bases
GGCGTACCTGCGACCCCTTCGCCCACGCGACAGCTTTGTCCTGTGATCTGGCCCGTGCCGACACCCACGCGGACCTCCTC
CTCGCTCCGAGGAGGCCCCG

Downstream 100 bases:

>100_bases
TCTCCGACGCATCAGCCCCGGCTCCGGTAAGTAAGCACCGTGCCGCATGGTGCGGCTATCCGGGGCCTCGGAAATCAGAA
CCTGAACAAAAGAGGAGTTC

Product: sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-70 Family RNA Polymerase Sigma Factor; Sigma-24 Factor

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAKKTTFMARIVERHISTILEAR
FAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDGEGSLGGGTRETRERLAHEIRMDLDRAIASLPEELRDLCVRLHDSTM
AEIAREMGIPRTTLYDRLSKLREAFSEAGLTDYL

Sequences:

>Translated_194_residues
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAKKTTFMARIVERHISTILEAR
FAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDGEGSLGGGTRETRERLAHEIRMDLDRAIASLPEELRDLCVRLHDSTM
AEIAREMGIPRTTLYDRLSKLREAFSEAGLTDYL
>Mature_194_residues
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAKKTTFMARIVERHISTILEAR
FAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDGEGSLGGGTRETRERLAHEIRMDLDRAIASLPEELRDLCVRLHDSTM
AEIAREMGIPRTTLYDRLSKLREAFSEAGLTDYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22258; Mature: 22258

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KTTFMARIVERHISTILEARFAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDGEGSLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
GTRETRERLAHEIRMDLDRAIASLPEELRDLCVRLHDSTMAEIAREMGIPRTTLYDRLSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LREAFSEAGLTDYL
HHHHHHHCCCCCCC
>Mature Secondary Structure
MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
KTTFMARIVERHISTILEARFAQCRDWRLCQTSLNEPLDNGEGDTTERIDFLDGEGSLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCC
GTRETRERLAHEIRMDLDRAIASLPEELRDLCVRLHDSTMAEIAREMGIPRTTLYDRLSK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LREAFSEAGLTDYL
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA