| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356934
Identifier: 78356934
GI number: 78356934
Start: 1942963
End: 1944084
Strand: Reverse
Name: 78356934
Synonym: Dde_1891
Alternate gene names: NA
Gene position: 1944084-1942963 (Counterclockwise)
Preceding gene: 78356935
Following gene: 78356933
Centisome position: 52.12
GC content: 53.48
Gene sequence:
>1122_bases ATGTTCGGCACCCTATTGACCGCCGGGTTCACCTTGATGCTCGCATATGTCTTGTGGCGCGCAGGATCGGTGCCTTTTTT CAAGAATTATTTTTCACGCCGCTGGATTGTGGGGCTTGGCACCCTTGTCTGGCTCGTTTTTTTCTTCGGCCGATTCTTTG GTCATCAGAATGCGGGCGCCTTGGCCGGCGCTATCGAGGTTGCCGGCATGACCATTCTGGGAGTGGTGTTCCTCATTGCT ACAGCTGTATTCATTGTGGACCTTTTCACTCTCTTCGGATTCCTGCTGCCAAAGCGGCGGCCGCCCCTGTTTGGTCTGGC GCTGGTCGCTGGTGCGGCAATGGCCAGCATTGCCCTGGTTCAAGGACTTCGAGAGCCCGCAGTGGTTTCATACGAAGTAA CCCTTCCAAGCCTGCCGGTCGAGTTGGACCGTACAGTTTTGGTGGCCCTCTCCGATACGCATCTTGGCGCTATTCTTGAC AGCCGATGGATGAATGATCGGATCGTGCAAATTCAGGCTTTGCGACCTGACCTTTTAGTTTTTACAGGGGATATTTTCGA AGGGCATGGCGCTATGCCAGATCCTATCCCGGCCTTGAATCATTTGAGCGTTCCACTTGGGAAATGGTACGTCGACGGCA ATCACGAATCACATCATAGTAGTGAACCCGGCCTCAAGGTGTTGGAAGAGGCGGGTTTCCGTCGTCTTGAAAACCAATGG GCTGAACTTGCACCGGGTCTTATCCTGTCCGGCGTGAACGACTTGACCAATCAACGACGTCGAAATATCGATGGCGATCC GCTGGCAGCAGCGCTTGCCAACCGCCCGAAGGGAGCTACGATTCTGCTGTCACATACGCCCTGGCAAACCGATCGTGCCG CTCAAGCCGGGGTGGAACTGATGCTGTCTGGCCACACGCATGGCGGACAAATTTGGCCTTTCGGTTATCTCGTTCAAAGA GTATATCCTTTTCTTGCAGGACGATATGACATTAATGGAATGGAACTGCTGGTCAGCAGGGGTACTGGAACATGGGGGCC GCGCATGCGGCTGTGGCACAGGAGTGAAATAATCAAAGTTACACTACGTGCGCCTCTAAAAAATCCAGTCAAACGTCAAT AA
Upstream 100 bases:
>100_bases CGTCATGAATGATCCGCGGGAGGCAAAATGAGATTAGAAACGACGCAAGACGCCAATCGAGCACTTTTGAGTCCGTTCTA TTCGTAGAGGAAGGAGTCTC
Downstream 100 bases:
>100_bases TCCACAGCTTTTAGACGAACCTCTGTTCATTGATTATCCTACCTTAGCCCGACACATCCAAATCACCTCCGGTAAGTAAT ACGCCAGAATGACCGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MFGTLLTAGFTLMLAYVLWRAGSVPFFKNYFSRRWIVGLGTLVWLVFFFGRFFGHQNAGALAGAIEVAGMTILGVVFLIA TAVFIVDLFTLFGFLLPKRRPPLFGLALVAGAAMASIALVQGLREPAVVSYEVTLPSLPVELDRTVLVALSDTHLGAILD SRWMNDRIVQIQALRPDLLVFTGDIFEGHGAMPDPIPALNHLSVPLGKWYVDGNHESHHSSEPGLKVLEEAGFRRLENQW AELAPGLILSGVNDLTNQRRRNIDGDPLAAALANRPKGATILLSHTPWQTDRAAQAGVELMLSGHTHGGQIWPFGYLVQR VYPFLAGRYDINGMELLVSRGTGTWGPRMRLWHRSEIIKVTLRAPLKNPVKRQ
Sequences:
>Translated_373_residues MFGTLLTAGFTLMLAYVLWRAGSVPFFKNYFSRRWIVGLGTLVWLVFFFGRFFGHQNAGALAGAIEVAGMTILGVVFLIA TAVFIVDLFTLFGFLLPKRRPPLFGLALVAGAAMASIALVQGLREPAVVSYEVTLPSLPVELDRTVLVALSDTHLGAILD SRWMNDRIVQIQALRPDLLVFTGDIFEGHGAMPDPIPALNHLSVPLGKWYVDGNHESHHSSEPGLKVLEEAGFRRLENQW AELAPGLILSGVNDLTNQRRRNIDGDPLAAALANRPKGATILLSHTPWQTDRAAQAGVELMLSGHTHGGQIWPFGYLVQR VYPFLAGRYDINGMELLVSRGTGTWGPRMRLWHRSEIIKVTLRAPLKNPVKRQ >Mature_373_residues MFGTLLTAGFTLMLAYVLWRAGSVPFFKNYFSRRWIVGLGTLVWLVFFFGRFFGHQNAGALAGAIEVAGMTILGVVFLIA TAVFIVDLFTLFGFLLPKRRPPLFGLALVAGAAMASIALVQGLREPAVVSYEVTLPSLPVELDRTVLVALSDTHLGAILD SRWMNDRIVQIQALRPDLLVFTGDIFEGHGAMPDPIPALNHLSVPLGKWYVDGNHESHHSSEPGLKVLEEAGFRRLENQW AELAPGLILSGVNDLTNQRRRNIDGDPLAAALANRPKGATILLSHTPWQTDRAAQAGVELMLSGHTHGGQIWPFGYLVQR VYPFLAGRYDINGMELLVSRGTGTWGPRMRLWHRSEIIKVTLRAPLKNPVKRQ
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Homo sapiens, GI210031196, Length=298, Percent_Identity=30.2013422818792, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI210031210, Length=298, Percent_Identity=30.2013422818792, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI115535030, Length=291, Percent_Identity=27.1477663230241, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI115535028, Length=291, Percent_Identity=27.1477663230241, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI71996034, Length=236, Percent_Identity=24.5762711864407, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 41145; Mature: 41145
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGTLLTAGFTLMLAYVLWRAGSVPFFKNYFSRRWIVGLGTLVWLVFFFGRFFGHQNAGA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH LAGAIEVAGMTILGVVFLIATAVFIVDLFTLFGFLLPKRRPPLFGLALVAGAAMASIALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QGLREPAVVSYEVTLPSLPVELDRTVLVALSDTHLGAILDSRWMNDRIVQIQALRPDLLV HCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCEEE FTGDIFEGHGAMPDPIPALNHLSVPLGKWYVDGNHESHHSSEPGLKVLEEAGFRRLENQW EECCEECCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH AELAPGLILSGVNDLTNQRRRNIDGDPLAAALANRPKGATILLSHTPWQTDRAAQAGVEL HHHCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCEE MLSGHTHGGQIWPFGYLVQRVYPFLAGRYDINGMELLVSRGTGTWGPRMRLWHRSEIIKV EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHEECCCEEEE TLRAPLKNPVKRQ EEECCCCCCCCCC >Mature Secondary Structure MFGTLLTAGFTLMLAYVLWRAGSVPFFKNYFSRRWIVGLGTLVWLVFFFGRFFGHQNAGA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCH LAGAIEVAGMTILGVVFLIATAVFIVDLFTLFGFLLPKRRPPLFGLALVAGAAMASIALV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH QGLREPAVVSYEVTLPSLPVELDRTVLVALSDTHLGAILDSRWMNDRIVQIQALRPDLLV HCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEEEECCCCEEE FTGDIFEGHGAMPDPIPALNHLSVPLGKWYVDGNHESHHSSEPGLKVLEEAGFRRLENQW EECCEECCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH AELAPGLILSGVNDLTNQRRRNIDGDPLAAALANRPKGATILLSHTPWQTDRAAQAGVEL HHHCCCHHHHCHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCHHHHHCCEE MLSGHTHGGQIWPFGYLVQRVYPFLAGRYDINGMELLVSRGTGTWGPRMRLWHRSEIIKV EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHEECCCEEEE TLRAPLKNPVKRQ EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]