Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yfaP [C]

Identifier: 78356920

GI number: 78356920

Start: 1929325

End: 1930458

Strand: Reverse

Name: yfaP [C]

Synonym: Dde_1877

Alternate gene names: 78356920

Gene position: 1930458-1929325 (Counterclockwise)

Preceding gene: 78356921

Following gene: 78356919

Centisome position: 51.75

GC content: 65.34

Gene sequence:

>1134_bases
GTGCGGCTTCGTTCCCGGGGCGGCCATGATCCTGGTCTGGGATTCGCCCGAGCGGCTCAGCCTCCGTCACGTCCAGGTCG
AGGTCTATGGCGGCGGCGTCTCCGCACCGGTGGATGTCCCTTCATGACCGATACCCCGCCAGCCTTTAGCCACTGGGAGG
TTCAGCCTCGCTCCATCCGCCTCTCCGCTGGCGAGTTCGAGCAACGGGTTCCGCTCTCCCTGCGCGGCGACGTGGACGCC
CCGGTCTTTGCCTCCAGCAATCCGGAGGTCGCGGAGATCGGGCCGGACGGTGTCATTCGCTGCGGCTGGACCATCGGCAA
CGCCGTGCTCATGGTCTGGCGATCCTCGGTCCGGGACAGCCTCCGCCATGTTCTGGTGGAGGTCCGCGATCCGTCCTGGT
TCGCCGACCACCCGGACTTTGCCAGCGGAGCATCGGTCTTCCTCAGCGGCATGGTGGTCAACGCCCTCAACACCAGCGGC
GTCGGCAACGCGCTGATCGAATTCCGCCGCTCGGAAACCGGCCCGGCGGCGTTCCAGACCTTCGCCAACGCCTATGGCGG
GTTCGAGCTGACCGTGCCCGAGGGGTTCTATTACGTGGAGGTCACCGCGCCGGGATACATCGCCTGGCATGGCTGGGTGA
ACGCCGACACCAACACCTCCGGCGACATCCAGATCGTTCTCTCGCCCGAACTCGACGGCCAGGTCGCCCGCATCGTGTTG
CAGTGGGGGCTCAACCCCCGGGATCTCGATTCCCATCTCACCGGACCGACGCCATCGGGCGGTCGCTTCCATGTGTTCTA
TTCCCACACCATCGAAAACGAGGCGGCGGAATTGGACGTGGACGACACCAGCTCCTACGGGCCGGAGACCATCACCATCC
ATCGGCTCATCCCCGGCGTCTACCGCTACGCGGTCCACGACTACACCAACCGCAACACCAATCCGAGCACCGGCCTGGCG
CAGTCCGGAGCCACGGTGAAAGTGTTCCTGAGCGATGGCCGTGAGCAGACCTTCACCGTTCCCAACGCCCCGGGTACGGT
CTGGACCGTGTTCGAAATCGACGGCGCGACTGGAACAGTGACGCCGGTCAACGCCATGAGCTATCAATCCCAACCCGCCA
ACGTCGGCATGTAA

Upstream 100 bases:

>100_bases
TCCAGCGCATTCCGCTCTCGATCCGTGGTCTACCCGAAGCGCCGGTGTTCGAATCGTCCAATCCCGACGTGGCCAGTGTC
GATGAGGACGGCAATGTCGA

Downstream 100 bases:

>100_bases
TGGAGGTTGTCCATGATTTCCGAAGAACCCGCCGACTTGCAGGCCACCATCGAACAAACCGATTCCGGCCAACAACAGTA
TGTGCTGCGGGCGCTCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRLRSRGGHDPGLGFARAAQPPSRPGRGLWRRRLRTGGCPFMTDTPPAFSHWEVQPRSIRLSAGEFEQRVPLSLRGDVDA
PVFASSNPEVAEIGPDGVIRCGWTIGNAVLMVWRSSVRDSLRHVLVEVRDPSWFADHPDFASGASVFLSGMVVNALNTSG
VGNALIEFRRSETGPAAFQTFANAYGGFELTVPEGFYYVEVTAPGYIAWHGWVNADTNTSGDIQIVLSPELDGQVARIVL
QWGLNPRDLDSHLTGPTPSGGRFHVFYSHTIENEAAELDVDDTSSYGPETITIHRLIPGVYRYAVHDYTNRNTNPSTGLA
QSGATVKVFLSDGREQTFTVPNAPGTVWTVFEIDGATGTVTPVNAMSYQSQPANVGM

Sequences:

>Translated_377_residues
MRLRSRGGHDPGLGFARAAQPPSRPGRGLWRRRLRTGGCPFMTDTPPAFSHWEVQPRSIRLSAGEFEQRVPLSLRGDVDA
PVFASSNPEVAEIGPDGVIRCGWTIGNAVLMVWRSSVRDSLRHVLVEVRDPSWFADHPDFASGASVFLSGMVVNALNTSG
VGNALIEFRRSETGPAAFQTFANAYGGFELTVPEGFYYVEVTAPGYIAWHGWVNADTNTSGDIQIVLSPELDGQVARIVL
QWGLNPRDLDSHLTGPTPSGGRFHVFYSHTIENEAAELDVDDTSSYGPETITIHRLIPGVYRYAVHDYTNRNTNPSTGLA
QSGATVKVFLSDGREQTFTVPNAPGTVWTVFEIDGATGTVTPVNAMSYQSQPANVGM
>Mature_377_residues
MRLRSRGGHDPGLGFARAAQPPSRPGRGLWRRRLRTGGCPFMTDTPPAFSHWEVQPRSIRLSAGEFEQRVPLSLRGDVDA
PVFASSNPEVAEIGPDGVIRCGWTIGNAVLMVWRSSVRDSLRHVLVEVRDPSWFADHPDFASGASVFLSGMVVNALNTSG
VGNALIEFRRSETGPAAFQTFANAYGGFELTVPEGFYYVEVTAPGYIAWHGWVNADTNTSGDIQIVLSPELDGQVARIVL
QWGLNPRDLDSHLTGPTPSGGRFHVFYSHTIENEAAELDVDDTSSYGPETITIHRLIPGVYRYAVHDYTNRNTNPSTGLA
QSGATVKVFLSDGREQTFTVPNAPGTVWTVFEIDGATGTVTPVNAMSYQSQPANVGM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40976; Mature: 40976

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRSRGGHDPGLGFARAAQPPSRPGRGLWRRRLRTGGCPFMTDTPPAFSHWEVQPRSIR
CCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEE
LSAGEFEQRVPLSLRGDVDAPVFASSNPEVAEIGPDGVIRCGWTIGNAVLMVWRSSVRDS
EECCCHHHCCCEEECCCCCCCEEECCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHH
LRHVLVEVRDPSWFADHPDFASGASVFLSGMVVNALNTSGVGNALIEFRRSETGPAAFQT
HHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCHHHHHH
FANAYGGFELTVPEGFYYVEVTAPGYIAWHGWVNADTNTSGDIQIVLSPELDGQVARIVL
HHHHCCCEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHEEHHH
QWGLNPRDLDSHLTGPTPSGGRFHVFYSHTIENEAAELDVDDTSSYGPETITIHRLIPGV
HHCCCHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHEECCCCCCCCCCCEEEEHHHHHHH
YRYAVHDYTNRNTNPSTGLAQSGATVKVFLSDGREQTFTVPNAPGTVWTVFEIDGATGTV
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCC
TPVNAMSYQSQPANVGM
CCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MRLRSRGGHDPGLGFARAAQPPSRPGRGLWRRRLRTGGCPFMTDTPPAFSHWEVQPRSIR
CCCCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCEEE
LSAGEFEQRVPLSLRGDVDAPVFASSNPEVAEIGPDGVIRCGWTIGNAVLMVWRSSVRDS
EECCCHHHCCCEEECCCCCCCEEECCCCCEEEECCCCEEEECCHHHHHHHHHHHHHHHHH
LRHVLVEVRDPSWFADHPDFASGASVFLSGMVVNALNTSGVGNALIEFRRSETGPAAFQT
HHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCHHHHHH
FANAYGGFELTVPEGFYYVEVTAPGYIAWHGWVNADTNTSGDIQIVLSPELDGQVARIVL
HHHHCCCEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCCCEEEEECCCCCCHHEEHHH
QWGLNPRDLDSHLTGPTPSGGRFHVFYSHTIENEAAELDVDDTSSYGPETITIHRLIPGV
HHCCCHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHEECCCCCCCCCCCEEEEHHHHHHH
YRYAVHDYTNRNTNPSTGLAQSGATVKVFLSDGREQTFTVPNAPGTVWTVFEIDGATGTV
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEEECCCCCCC
TPVNAMSYQSQPANVGM
CCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA