| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mrr [C]
Identifier: 78356901
GI number: 78356901
Start: 1906851
End: 1907900
Strand: Reverse
Name: mrr [C]
Synonym: Dde_1858
Alternate gene names: 78356901
Gene position: 1907900-1906851 (Counterclockwise)
Preceding gene: 78356902
Following gene: 78356900
Centisome position: 51.15
GC content: 58.38
Gene sequence:
>1050_bases ATGGACGTTAAAACGGCCGCCATTCAGGTTTTGCAGCAGGCCGGAACGGAACTGCACGCCAAGGATATCGCCGAGCAGAT CATGGCTGCCGGTCTCTGGCAATCCGGAGGGAAAACCCCAGACGCCACTGTCAGCGCCCGGCTCTACTCCGACATCAAGA ACAACGGAGACAAGTCACCCTTTGTAAAGGTCGGCCCTCAGACCTTCGCGCTTCGGGATTCCGCTGAAATACCGAGCGGC GCTGAACCGGTTCCTGCGTTCGTCGAGGACACTCCAAAACCGCCTTCTGTAAATGCAGGTTTCTCCTTCACCGATTGCGC TCAGAAAGTGCTTGAGACGTTCGGCGGCAAGAAGCCGATGCATTACAAAGAGATCACCGAGAAGGCCCTGCAAAAAGGCT GGCTGGTAACCGGCGGCAAGACGCCCGAGGCCACCATGTACGCCCAGGTGATCACCGAGATCAAGCGCCAGCAGAAATGT GGTGAGCGGCCCCGCTTCGTTCAGCACGGCCGTGGCAATGTGGGCCTGAGCCAATGGATGGGGCGTGGGTTGGCGTTCCA GATCGAGCAGCACAACCACCAGGTCCGGAAAGTCTTGCGCGAACGACTGCTGGCCATGAAGCCCGGCGAGTTCGAGGAAC TTATCTCGCAGTTGCTGGCGGAGATGGGTTTCGAGATGGTCGAGGTAACCAAACTCAGCGGAGACGGCGGCATCGATGTC CGGGGCACCTTGGTGGTCGGTGACGTGGTCCGCATCAAGATGGCCGTCCAGGTCAAGAAATGGAAGCTCAAGAACAACAT CCAGGCTCCGGTGGTACAGCAGGTGCGCGGCAGTTTGGGGGCGCACGAGCAAGGCCTGATCATCACCACCAGCGACTTCA GTGCCGGAGCCATCAAGGAAGCGGCCCAGTCCGACAAGACCCCAATCGCCCTGATGAACGGGGAACAGCTTGTAATGCTG CTGATGGAACACGGCATCGGCGTCCATCGCTCGACGCCTGATCTTTTTGAAATTGATGAAGAGTGTGCCGTAAGAGCTGA AACAGAATGA
Upstream 100 bases:
>100_bases CAGTTCAGCGACAACCCGTCGTTCAAGAAATGGCTTGGCGACACCATCTTCGGCGTGACCTATCAGCAACAGGCCGAACA ATCCGCAACGGGGGCGAGCC
Downstream 100 bases:
>100_bases ATTTGCTGTGATGAGACGGGAATGCCTTGGGAATCAGAACAAAATAAATATGAGAGAAACATGCATATGACGTTATTGGA AAGGTATCGCTATTACGGCG
Product: restriction endonuclease-like
Products: NA
Alternate protein names: Mrr Restriction System Protein; Mrr Restriction Endonuclease; Mrr Restiction System Protein; Restriction Endonuclease Mrr; Restriction Endonuclease-Like; 5-Methylcytosine-Specific Restriction MRR
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MDVKTAAIQVLQQAGTELHAKDIAEQIMAAGLWQSGGKTPDATVSARLYSDIKNNGDKSPFVKVGPQTFALRDSAEIPSG AEPVPAFVEDTPKPPSVNAGFSFTDCAQKVLETFGGKKPMHYKEITEKALQKGWLVTGGKTPEATMYAQVITEIKRQQKC GERPRFVQHGRGNVGLSQWMGRGLAFQIEQHNHQVRKVLRERLLAMKPGEFEELISQLLAEMGFEMVEVTKLSGDGGIDV RGTLVVGDVVRIKMAVQVKKWKLKNNIQAPVVQQVRGSLGAHEQGLIITTSDFSAGAIKEAAQSDKTPIALMNGEQLVML LMEHGIGVHRSTPDLFEIDEECAVRAETE
Sequences:
>Translated_349_residues MDVKTAAIQVLQQAGTELHAKDIAEQIMAAGLWQSGGKTPDATVSARLYSDIKNNGDKSPFVKVGPQTFALRDSAEIPSG AEPVPAFVEDTPKPPSVNAGFSFTDCAQKVLETFGGKKPMHYKEITEKALQKGWLVTGGKTPEATMYAQVITEIKRQQKC GERPRFVQHGRGNVGLSQWMGRGLAFQIEQHNHQVRKVLRERLLAMKPGEFEELISQLLAEMGFEMVEVTKLSGDGGIDV RGTLVVGDVVRIKMAVQVKKWKLKNNIQAPVVQQVRGSLGAHEQGLIITTSDFSAGAIKEAAQSDKTPIALMNGEQLVML LMEHGIGVHRSTPDLFEIDEECAVRAETE >Mature_349_residues MDVKTAAIQVLQQAGTELHAKDIAEQIMAAGLWQSGGKTPDATVSARLYSDIKNNGDKSPFVKVGPQTFALRDSAEIPSG AEPVPAFVEDTPKPPSVNAGFSFTDCAQKVLETFGGKKPMHYKEITEKALQKGWLVTGGKTPEATMYAQVITEIKRQQKC GERPRFVQHGRGNVGLSQWMGRGLAFQIEQHNHQVRKVLRERLLAMKPGEFEELISQLLAEMGFEMVEVTKLSGDGGIDV RGTLVVGDVVRIKMAVQVKKWKLKNNIQAPVVQQVRGSLGAHEQGLIITTSDFSAGAIKEAAQSDKTPIALMNGEQLVML LMEHGIGVHRSTPDLFEIDEECAVRAETE
Specific function: Involved In The Acceptance Of Foreign DNA Which Is Modified. Restricts Both Adenine- And Cytosine-Methylated DNA. [C]
COG id: COG1715
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38126; Mature: 38126
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVKTAAIQVLQQAGTELHAKDIAEQIMAAGLWQSGGKTPDATVSARLYSDIKNNGDKSP CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC FVKVGPQTFALRDSAEIPSGAEPVPAFVEDTPKPPSVNAGFSFTDCAQKVLETFGGKKPM EEEECCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC HYKEITEKALQKGWLVTGGKTPEATMYAQVITEIKRQQKCGERPRFVQHGRGNVGLSQWM HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH GRGLAFQIEQHNHQVRKVLRERLLAMKPGEFEELISQLLAEMGFEMVEVTKLSGDGGIDV CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCE RGTLVVGDVVRIKMAVQVKKWKLKNNIQAPVVQQVRGSLGAHEQGLIITTSDFSAGAIKE EEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH AAQSDKTPIALMNGEQLVMLLMEHGIGVHRSTPDLFEIDEECAVRAETE HHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCC >Mature Secondary Structure MDVKTAAIQVLQQAGTELHAKDIAEQIMAAGLWQSGGKTPDATVSARLYSDIKNNGDKSP CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC FVKVGPQTFALRDSAEIPSGAEPVPAFVEDTPKPPSVNAGFSFTDCAQKVLETFGGKKPM EEEECCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC HYKEITEKALQKGWLVTGGKTPEATMYAQVITEIKRQQKCGERPRFVQHGRGNVGLSQWM HHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH GRGLAFQIEQHNHQVRKVLRERLLAMKPGEFEELISQLLAEMGFEMVEVTKLSGDGGIDV CCCEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCE RGTLVVGDVVRIKMAVQVKKWKLKNNIQAPVVQQVRGSLGAHEQGLIITTSDFSAGAIKE EEEEEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCHHHHH AAQSDKTPIALMNGEQLVMLLMEHGIGVHRSTPDLFEIDEECAVRAETE HHHCCCCCEEEECCHHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA