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The map label for this gene is yaaJ [C]

Identifier: 78356889

GI number: 78356889

Start: 1896009

End: 1897346

Strand: Direct

Name: yaaJ [C]

Synonym: Dde_1846

Alternate gene names: 78356889

Gene position: 1896009-1897346 (Clockwise)

Preceding gene: 78356888

Following gene: 78356890

Centisome position: 50.83

GC content: 55.83

Gene sequence:

>1338_bases
ATGCAAGATTTTCTCAATTTGCTCAGCGGGTATGTATGGGGCTGGCCCCTGATGCTGCTTCTGGTCGGCACAGGGGTGTG
GCTGACCATACTGCTGAAAGGAGTGCAGTTTTCCAAACTGGCCTACGCGCTCCATCTGGCCTTCATCAAACGTAAAGAAC
ACGGCGCAGAAGGGGACATATCCCACTTTCAGGCTCTGATGACGGCTCTCTCAGCCACGGTGGGTACGGGCAACATTGCA
GGGGTTGCCACGGCTATTTTCATCGGTGGCCCCGGAGCTCTTTTCTGGATGTGGATGACAGGTCTTGTGGGCATGGCCAC
AAAGTACGGCGAAGCCGTGCTGGCTGTAAAATACCGCATTCAGGATGAAGACGGCACCATGAGCGGCGGCCCCATGTATT
ATATTTCCAACGGGCTGGGCTGGAAATGGCTGGGCTCGCTCTTCGCTTTTTTTGCCGCCGTCGCGGCTTTCGGTATCGGC
AGCATGGTGCAGTCCAACTCCGTAGCCGACGCCATCAACCACAGCTTCAACATCGCCCCTGAAATCACGGGGATCACGCT
CATGGTTTTCACCGCCTTCGTTATCATCGGCGGCATTAAAAGCATCGGGCGCGTCACTTCCATCCTCGTGCCTTTCATGA
TTGTACTGTACATGGCCGGGTCGCTGGTCATTCTGGTCATTCATGCAGACAAAATTCCCGGTGCTCTGTCACTGGTATTT
GAATACGCATTCTCGCCTGTTGCAGCCAGCGGCGGCTTTGCCGGTGCCGCGGTCATGCTTGCCATCCGCATGGGTGTGGC
GCGCGGGCTGTTCTCCAACGAGTCAGGTCTGGGATCGGCCCCCATCGCAGCAGCCGCAGCGCAGACCAATTCGCCTGTCA
TGCAGGCCCTTGTATCCATGACGCAGACTTTTATCGATACCATCATCGTCTGCTCAATGACCGGCCTTGTCATACTGGTC
ACCGGTGCATGGACTTCGGGTGAAAACGGCGCCTCACTGACTTCCTATGCCTATTCGCTGGGGTTGCCCGGAAGCATGGG
CGGCCTCATCGTTACTGTGGGTATTATTCTTTTCGCATACTCCACCATTCTGGGCTGGAGCTATTACGGCGAAAAATCCA
TCGGGTACCTGCTGGGCACCTGGGCCGTAAAGCCCTACCGCTGGCTTTTTGTGGCATCCGTGGGATTGGGTGCCGTGCTC
AAGCTTGATGTGGTATGGACCGTATCGGACATCTTTAACGGGCTGATGGCGTTCCCCAACCTCATCGGTCTGATCATGCT
TTCGCCGGTTATCGCTTCTGAAACGAAAAAGTTTTTCAACGGCGGCAAACCGCGCTAA

Upstream 100 bases:

>100_bases
CACGGCATTTTAGTTATCGCTTACTGCCGGTTACTGCACTGCGCCCTGTCGGGGGGTGCACTGCGGGCCTGTGTACTATG
AAATGGAGGAGAACACCGGT

Downstream 100 bases:

>100_bases
GCCACAACCACCCCCAAAATAAAAAAGAGCGCTTCCGGCGCTCTTTTTTATTTGTCTTTCCGGATATAAAGCACATACTG
TCTTTTTTTCACGCTGGTCA

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MQDFLNLLSGYVWGWPLMLLLVGTGVWLTILLKGVQFSKLAYALHLAFIKRKEHGAEGDISHFQALMTALSATVGTGNIA
GVATAIFIGGPGALFWMWMTGLVGMATKYGEAVLAVKYRIQDEDGTMSGGPMYYISNGLGWKWLGSLFAFFAAVAAFGIG
SMVQSNSVADAINHSFNIAPEITGITLMVFTAFVIIGGIKSIGRVTSILVPFMIVLYMAGSLVILVIHADKIPGALSLVF
EYAFSPVAASGGFAGAAVMLAIRMGVARGLFSNESGLGSAPIAAAAAQTNSPVMQALVSMTQTFIDTIIVCSMTGLVILV
TGAWTSGENGASLTSYAYSLGLPGSMGGLIVTVGIILFAYSTILGWSYYGEKSIGYLLGTWAVKPYRWLFVASVGLGAVL
KLDVVWTVSDIFNGLMAFPNLIGLIMLSPVIASETKKFFNGGKPR

Sequences:

>Translated_445_residues
MQDFLNLLSGYVWGWPLMLLLVGTGVWLTILLKGVQFSKLAYALHLAFIKRKEHGAEGDISHFQALMTALSATVGTGNIA
GVATAIFIGGPGALFWMWMTGLVGMATKYGEAVLAVKYRIQDEDGTMSGGPMYYISNGLGWKWLGSLFAFFAAVAAFGIG
SMVQSNSVADAINHSFNIAPEITGITLMVFTAFVIIGGIKSIGRVTSILVPFMIVLYMAGSLVILVIHADKIPGALSLVF
EYAFSPVAASGGFAGAAVMLAIRMGVARGLFSNESGLGSAPIAAAAAQTNSPVMQALVSMTQTFIDTIIVCSMTGLVILV
TGAWTSGENGASLTSYAYSLGLPGSMGGLIVTVGIILFAYSTILGWSYYGEKSIGYLLGTWAVKPYRWLFVASVGLGAVL
KLDVVWTVSDIFNGLMAFPNLIGLIMLSPVIASETKKFFNGGKPR
>Mature_445_residues
MQDFLNLLSGYVWGWPLMLLLVGTGVWLTILLKGVQFSKLAYALHLAFIKRKEHGAEGDISHFQALMTALSATVGTGNIA
GVATAIFIGGPGALFWMWMTGLVGMATKYGEAVLAVKYRIQDEDGTMSGGPMYYISNGLGWKWLGSLFAFFAAVAAFGIG
SMVQSNSVADAINHSFNIAPEITGITLMVFTAFVIIGGIKSIGRVTSILVPFMIVLYMAGSLVILVIHADKIPGALSLVF
EYAFSPVAASGGFAGAAVMLAIRMGVARGLFSNESGLGSAPIAAAAAQTNSPVMQALVSMTQTFIDTIIVCSMTGLVILV
TGAWTSGENGASLTSYAYSLGLPGSMGGLIVTVGIILFAYSTILGWSYYGEKSIGYLLGTWAVKPYRWLFVASVGLGAVL
KLDVVWTVSDIFNGLMAFPNLIGLIMLSPVIASETKKFFNGGKPR

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=450, Percent_Identity=38, Blast_Score=261, Evalue=7e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 46927; Mature: 46927

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDFLNLLSGYVWGWPLMLLLVGTGVWLTILLKGVQFSKLAYALHLAFIKRKEHGAEGDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH
SHFQALMTALSATVGTGNIAGVATAIFIGGPGALFWMWMTGLVGMATKYGEAVLAVKYRI
HHHHHHHHHHHHHCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
QDEDGTMSGGPMYYISNGLGWKWLGSLFAFFAAVAAFGIGSMVQSNSVADAINHSFNIAP
ECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
EITGITLMVFTAFVIIGGIKSIGRVTSILVPFMIVLYMAGSLVILVIHADKIPGALSLVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
EYAFSPVAASGGFAGAAVMLAIRMGVARGLFSNESGLGSAPIAAAAAQTNSPVMQALVSM
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TQTFIDTIIVCSMTGLVILVTGAWTSGENGASLTSYAYSLGLPGSMGGLIVTVGIILFAY
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
STILGWSYYGEKSIGYLLGTWAVKPYRWLFVASVGLGAVLKLDVVWTVSDIFNGLMAFPN
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEHEEEHHHHHHHHHHHHH
LIGLIMLSPVIASETKKFFNGGKPR
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQDFLNLLSGYVWGWPLMLLLVGTGVWLTILLKGVQFSKLAYALHLAFIKRKEHGAEGDI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH
SHFQALMTALSATVGTGNIAGVATAIFIGGPGALFWMWMTGLVGMATKYGEAVLAVKYRI
HHHHHHHHHHHHHCCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEE
QDEDGTMSGGPMYYISNGLGWKWLGSLFAFFAAVAAFGIGSMVQSNSVADAINHSFNIAP
ECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
EITGITLMVFTAFVIIGGIKSIGRVTSILVPFMIVLYMAGSLVILVIHADKIPGALSLVF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHH
EYAFSPVAASGGFAGAAVMLAIRMGVARGLFSNESGLGSAPIAAAAAQTNSPVMQALVSM
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TQTFIDTIIVCSMTGLVILVTGAWTSGENGASLTSYAYSLGLPGSMGGLIVTVGIILFAY
HHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
STILGWSYYGEKSIGYLLGTWAVKPYRWLFVASVGLGAVLKLDVVWTVSDIFNGLMAFPN
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEHEEEHHHHHHHHHHHHH
LIGLIMLSPVIASETKKFFNGGKPR
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]