Click here to switch to the map view.

The map label for this gene is lutA [H]

Identifier: 78356885

GI number: 78356885

Start: 1892767

End: 1893564

Strand: Direct

Name: lutA [H]

Synonym: Dde_1842

Alternate gene names: 78356885

Gene position: 1892767-1893564 (Clockwise)

Preceding gene: 78356882

Following gene: 78356886

Centisome position: 50.74

GC content: 52.63

Gene sequence:

>798_bases
ATGTCCCGGGGGCAATCAATAGTAATACAACGTAAAGAGAGCGCTATGAGTTTATACCCCGACAAGCTTGATACTGTGTA
TTATTTCGGCACCTGCCTTGTGGACATGGCCTATCCCGATGCAGGCATGGCGGGCATAAAGCTGCTTCAGCAGCAGGGGG
TGCAGGTTATCTTTCCGCAGGAGCAGTCCTGTTGCGGACAGCCAGCCTACAATTCCGGTTTTCCCAGAGAAGCCATGGCG
GTGGCCCTCAAGCAGGTACAGGCTTTTTCTGCCCGGGACTGTCCAGTCGTGGTTCCTTCCGGTTCCTGCGCCGGCATGAT
GAAAACCCACTATCCCGAACTTTTTGCCGGCCATCCTGATTACTATGATATCAAGGCTTTTTCTGACAGAATTTATGAGC
TGGGAGACTTTCTGCTCAACGCATTGGGGGCCCGCTACAAAGACAAAGGGGAGCCTGTAAAAGTTACGTGGCATTCATCA
TGCCACGCCAGAACGGAAATGCGCGTCACAGAGCATGCAAAAGCGCTGTTGCGCCAGCTGGACAATGTGGAACTGGTGGA
ACTTGAACATGAGCATGAGTGCTGCGGATTCGGCGGAACCTTTTCCATAAAGCAACCCGAACTGTCCGGTGCCATGGTGC
AGGATAAAATCAACGATATCGTGGCAACAGGAGCATCACGGGTTATAACCGGCGACTGCGGCTGTATGATGAACATTGCC
GGTGCCATGGAAAAACAGGGGATCGGCGTCAGAGCACAGCACCTTGCAGAATTCATATGGGAGCGTATCCATGGCTAG

Upstream 100 bases:

>100_bases
CAACCCCTCCGGAAAAGAAGGATAAATTTTCATCAAGTCGACACGCTGCCGGGGCTGTGCTACACTGAACATTCTGTTAC
TCCTCTGTGACATGTTTGCC

Downstream 100 bases:

>100_bases
CAAAAAAAAGTTTGATTTTGCCGCGCATATTCAGGAAGCGCTCAACGATAGTCAGCTCAGAAGCAACTTTAAGTTTGCCA
TGGGCACCATGATACAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSRGQSIVIQRKESAMSLYPDKLDTVYYFGTCLVDMAYPDAGMAGIKLLQQQGVQVIFPQEQSCCGQPAYNSGFPREAMA
VALKQVQAFSARDCPVVVPSGSCAGMMKTHYPELFAGHPDYYDIKAFSDRIYELGDFLLNALGARYKDKGEPVKVTWHSS
CHARTEMRVTEHAKALLRQLDNVELVELEHEHECCGFGGTFSIKQPELSGAMVQDKINDIVATGASRVITGDCGCMMNIA
GAMEKQGIGVRAQHLAEFIWERIHG

Sequences:

>Translated_265_residues
MSRGQSIVIQRKESAMSLYPDKLDTVYYFGTCLVDMAYPDAGMAGIKLLQQQGVQVIFPQEQSCCGQPAYNSGFPREAMA
VALKQVQAFSARDCPVVVPSGSCAGMMKTHYPELFAGHPDYYDIKAFSDRIYELGDFLLNALGARYKDKGEPVKVTWHSS
CHARTEMRVTEHAKALLRQLDNVELVELEHEHECCGFGGTFSIKQPELSGAMVQDKINDIVATGASRVITGDCGCMMNIA
GAMEKQGIGVRAQHLAEFIWERIHG
>Mature_264_residues
SRGQSIVIQRKESAMSLYPDKLDTVYYFGTCLVDMAYPDAGMAGIKLLQQQGVQVIFPQEQSCCGQPAYNSGFPREAMAV
ALKQVQAFSARDCPVVVPSGSCAGMMKTHYPELFAGHPDYYDIKAFSDRIYELGDFLLNALGARYKDKGEPVKVTWHSSC
HARTEMRVTEHAKALLRQLDNVELVELEHEHECCGFGGTFSIKQPELSGAMVQDKINDIVATGASRVITGDCGCMMNIAG
AMEKQGIGVRAQHLAEFIWERIHG

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family [H]

Homologues:

Organism=Escherichia coli, GI1786497, Length=239, Percent_Identity=32.6359832635983, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1788576, Length=218, Percent_Identity=30.2752293577982, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI48994913, Length=221, Percent_Identity=20.3619909502262, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004017
- InterPro:   IPR022822 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 29237; Mature: 29106

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGQSIVIQRKESAMSLYPDKLDTVYYFGTCLVDMAYPDAGMAGIKLLQQQGVQVIFPQ
CCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECC
EQSCCGQPAYNSGFPREAMAVALKQVQAFSARDCPVVVPSGSCAGMMKTHYPELFAGHPD
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCHHHCCCCC
YYDIKAFSDRIYELGDFLLNALGARYKDKGEPVKVTWHSSCHARTEMRVTEHAKALLRQL
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
DNVELVELEHEHECCGFGGTFSIKQPELSGAMVQDKINDIVATGASRVITGDCGCMMNIA
CCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
GAMEKQGIGVRAQHLAEFIWERIHG
HHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRGQSIVIQRKESAMSLYPDKLDTVYYFGTCLVDMAYPDAGMAGIKLLQQQGVQVIFPQ
CCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECC
EQSCCGQPAYNSGFPREAMAVALKQVQAFSARDCPVVVPSGSCAGMMKTHYPELFAGHPD
CHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCHHHCCCCC
YYDIKAFSDRIYELGDFLLNALGARYKDKGEPVKVTWHSSCHARTEMRVTEHAKALLRQL
CEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH
DNVELVELEHEHECCGFGGTFSIKQPELSGAMVQDKINDIVATGASRVITGDCGCMMNIA
CCCEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
GAMEKQGIGVRAQHLAEFIWERIHG
HHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA