| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mtaD [H]
Identifier: 78356855
GI number: 78356855
Start: 1861778
End: 1863100
Strand: Reverse
Name: mtaD [H]
Synonym: Dde_1812
Alternate gene names: 78356855
Gene position: 1863100-1861778 (Counterclockwise)
Preceding gene: 78356863
Following gene: 78356854
Centisome position: 49.95
GC content: 58.13
Gene sequence:
>1323_bases ATGAAGCAACATTGTGACCGGATTATCAGAGCCGGTGTTCTTGTCACTCAGGACGAGCAGCGCCGTGTGCTTGGTGATGC GGCTGTGGCCGTGACCGGAGACACCATAGCCGCCGTCGACCATGCTGATGTGATAGTCGCGGAATGGAGCACCGACGCTG TAAGCGACCTTTCGGGCATGCTCGTCATGCCGGGGCTGGTCAATGCCCACACCCATGTGGCGATGACTTTTCTGCGCGGG CTTGCCGACGATTTGCCGCTAATGCAGTGGCTCACCGAGCATATTTTTCCGGTTGAAAAGCATCTGAGTGCCGAGATAGT CGAAGTCAGCGCTCTGCTGGGCTGCGCCGAAATGGCTGCCACGGGCACTACCACCCTGTGCGACATGTACCTTATCGAAG ATGCCACATTCAAGGCCGTTGACCGTGCGGGGCTGCGCATGCAGGGCGGAGAAGGCCTTTTCGCCTTTCCTTCGCCGGCA TATGCCTGCATTGAAGATGCCTTTGAACTAGTACGCCGGCAGCATGACAGGTATTCCTCTCACAGCCGCATACGTCATGC GGTCATGCCTCACGCCGTATACACCAGCAACCCTGAAATGCTGGCCCGCTGCGCCGCGCTGGCCGGAGAACTCGGTTGCG GGCTGCATATCCATCTGGCCGAAACCGCAGCCGAAACCGCGCAGTGCCTTGCGAGCTTCGGCAAACGCCCCATCCCTTAC TGCCGTGATCTGGGCGTACTTTCGCCGCGTACCACTGTGGCGCATGCGGTGGATGTAACCGATGACGAGCTGGAGATACT GCGCGAATCCGGGATTTGCGTGGCACACAACCCGGTAAGCAATATGAAGCTTGCATCAGGTGCCGCACGTGTTCCGGAAA TGCTTGCCGCAGGTATCTGCGTAGGCATTGGTACTGACGGTGCGGCCAGTAACAACGGGCTTAATATGTTTACGGAAATG AAAACATGCGCCCTGCTGCACAAGTTGCGCTATGCCGACCCGACCTGCGTGCCTGCGGCAACGGTGCTGGACATGGCAAC CACGGGGGGTGCGAAGTGCGCCGGCTGGCCGGAAACCGGTGCGCTGGTGCCGGGAGCCAAGGCAGATCTCATTGCACTGG ATTTGTCAGCCCCGAATCTGCAGCCTCTGTATTCTGCGGTTTCTCATATTGTTTATGCCGCCACAGGGCACGAAGTTACC CACACCATGGTCGGCGGTGAATTTGTATATGAAAACGGACGACACACCAGATTTGATTATCCGGCCTTGCTGCGGGAAGT GGCCTCTATCCGCAGGTGGGTGCAGAAAAAAATCACGGGATGA
Upstream 100 bases:
>100_bases ACATCCCCATTTCATTTTTCACTCCTGAGTTGTTAGTTATTGCCTGACAGACGATGTCTTTATACCATATGTGATTACGC CTGTCGCAAAGGAGACCTGA
Downstream 100 bases:
>100_bases TCCGGCTTTCTGGCCTGTTGAAACGCTTTTATGTTGACATTTGCCGCAATCCGTATCATGGATTCCTGCTTTCAAGACAA CAATACCGCGCAGCCTGCGC
Product: Atrazine chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKQHCDRIIRAGVLVTQDEQRRVLGDAAVAVTGDTIAAVDHADVIVAEWSTDAVSDLSGMLVMPGLVNAHTHVAMTFLRG LADDLPLMQWLTEHIFPVEKHLSAEIVEVSALLGCAEMAATGTTTLCDMYLIEDATFKAVDRAGLRMQGGEGLFAFPSPA YACIEDAFELVRRQHDRYSSHSRIRHAVMPHAVYTSNPEMLARCAALAGELGCGLHIHLAETAAETAQCLASFGKRPIPY CRDLGVLSPRTTVAHAVDVTDDELEILRESGICVAHNPVSNMKLASGAARVPEMLAAGICVGIGTDGAASNNGLNMFTEM KTCALLHKLRYADPTCVPAATVLDMATTGGAKCAGWPETGALVPGAKADLIALDLSAPNLQPLYSAVSHIVYAATGHEVT HTMVGGEFVYENGRHTRFDYPALLREVASIRRWVQKKITG
Sequences:
>Translated_440_residues MKQHCDRIIRAGVLVTQDEQRRVLGDAAVAVTGDTIAAVDHADVIVAEWSTDAVSDLSGMLVMPGLVNAHTHVAMTFLRG LADDLPLMQWLTEHIFPVEKHLSAEIVEVSALLGCAEMAATGTTTLCDMYLIEDATFKAVDRAGLRMQGGEGLFAFPSPA YACIEDAFELVRRQHDRYSSHSRIRHAVMPHAVYTSNPEMLARCAALAGELGCGLHIHLAETAAETAQCLASFGKRPIPY CRDLGVLSPRTTVAHAVDVTDDELEILRESGICVAHNPVSNMKLASGAARVPEMLAAGICVGIGTDGAASNNGLNMFTEM KTCALLHKLRYADPTCVPAATVLDMATTGGAKCAGWPETGALVPGAKADLIALDLSAPNLQPLYSAVSHIVYAATGHEVT HTMVGGEFVYENGRHTRFDYPALLREVASIRRWVQKKITG >Mature_440_residues MKQHCDRIIRAGVLVTQDEQRRVLGDAAVAVTGDTIAAVDHADVIVAEWSTDAVSDLSGMLVMPGLVNAHTHVAMTFLRG LADDLPLMQWLTEHIFPVEKHLSAEIVEVSALLGCAEMAATGTTTLCDMYLIEDATFKAVDRAGLRMQGGEGLFAFPSPA YACIEDAFELVRRQHDRYSSHSRIRHAVMPHAVYTSNPEMLARCAALAGELGCGLHIHLAETAAETAQCLASFGKRPIPY CRDLGVLSPRTTVAHAVDVTDDELEILRESGICVAHNPVSNMKLASGAARVPEMLAAGICVGIGTDGAASNNGLNMFTEM KTCALLHKLRYADPTCVPAATVLDMATTGGAKCAGWPETGALVPGAKADLIALDLSAPNLQPLYSAVSHIVYAATGHEVT HTMVGGEFVYENGRHTRFDYPALLREVASIRRWVQKKITG
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=377, Percent_Identity=23.0769230769231, Blast_Score=95, Evalue=1e-19, Organism=Escherichia coli, GI1789249, Length=378, Percent_Identity=26.4550264550265, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082177, Length=436, Percent_Identity=24.0825688073394, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6319963, Length=343, Percent_Identity=26.2390670553936, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24643849, Length=387, Percent_Identity=24.8062015503876, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 47108; Mature: 47108
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHCDRIIRAGVLVTQDEQRRVLGDAAVAVTGDTIAAVDHADVIVAEWSTDAVSDLSGM CCHHHHHHHHCCEEEECCHHHHHHCCEEEEEECCEEEEECCCCEEEEECCCHHHHHCCCC LVMPGLVNAHTHVAMTFLRGLADDLPLMQWLTEHIFPVEKHLSAEIVEVSALLGCAEMAA EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TGTTTLCDMYLIEDATFKAVDRAGLRMQGGEGLFAFPSPAYACIEDAFELVRRQHDRYSS CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH HSRIRHAVMPHAVYTSNPEMLARCAALAGELGCGLHIHLAETAAETAQCLASFGKRPIPY HHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCH CRDLGVLSPRTTVAHAVDVTDDELEILRESGICVAHNPVSNMKLASGAARVPEMLAAGIC HHHCCCCCCCCHHHEEECCCCHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHCCCE VGIGTDGAASNNGLNMFTEMKTCALLHKLRYADPTCVPAATVLDMATTGGAKCAGWPETG EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC ALVPGAKADLIALDLSAPNLQPLYSAVSHIVYAATGHEVTHTMVGGEFVYENGRHTRFDY CCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCCEEHEEECCEEEEECCCCCCCCH PALLREVASIRRWVQKKITG HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQHCDRIIRAGVLVTQDEQRRVLGDAAVAVTGDTIAAVDHADVIVAEWSTDAVSDLSGM CCHHHHHHHHCCEEEECCHHHHHHCCEEEEEECCEEEEECCCCEEEEECCCHHHHHCCCC LVMPGLVNAHTHVAMTFLRGLADDLPLMQWLTEHIFPVEKHLSAEIVEVSALLGCAEMAA EECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH TGTTTLCDMYLIEDATFKAVDRAGLRMQGGEGLFAFPSPAYACIEDAFELVRRQHDRYSS CCCHHHHHHHHHCCCHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH HSRIRHAVMPHAVYTSNPEMLARCAALAGELGCGLHIHLAETAAETAQCLASFGKRPIPY HHHHHHHHCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCH CRDLGVLSPRTTVAHAVDVTDDELEILRESGICVAHNPVSNMKLASGAARVPEMLAAGIC HHHCCCCCCCCHHHEEECCCCHHHHHHHHCCCEEEECCCCCCEECCCHHHHHHHHHCCCE VGIGTDGAASNNGLNMFTEMKTCALLHKLRYADPTCVPAATVLDMATTGGAKCAGWPETG EEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC ALVPGAKADLIALDLSAPNLQPLYSAVSHIVYAATGHEVTHTMVGGEFVYENGRHTRFDY CCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCCEEHEEECCEEEEECCCCCCCCH PALLREVASIRRWVQKKITG HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA