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The map label for this gene is 78356812

Identifier: 78356812

GI number: 78356812

Start: 1823748

End: 1824287

Strand: Direct

Name: 78356812

Synonym: Dde_1769

Alternate gene names: NA

Gene position: 1823748-1824287 (Clockwise)

Preceding gene: 78356811

Following gene: 78356813

Centisome position: 48.89

GC content: 54.63

Gene sequence:

>540_bases
ATGAACAGAATTAGCATAACAGGCCACATGATTATGGTGCTGCTTGCCTGTCTGGTTTTGCAGGCCGCCCCCGCCACCGC
GGCAGAGGATATTCCCACCTCCATCACATCTAAGACCATGACTTATGACGCCAACGCCCAGCTGATCATTTTTGAACAGG
ATGTATACGTGCAGCGCGGTGAATTTGAACTGTGGGCGGACTCCATCTCCGTCTATCTGGACAAGAACGCCAGTGCCGCC
GCGAAGCAAAACGACGCCGAAGGCCCTGCCATTGACGCCGGCCAGATCAACAGGCTGGTGGCCGAAGGTAACGTACGCAT
GAAGCAGCTGACGAAATCGGGAGAATGCCGCAAGGCCACCTACAAGGTTTCGGAAGGACTGCTTGTGATGGAAGGAGACC
CCGTACTTCGCGACGAGGGCAACAGTATCGGCGGGCAGGAAATCAGGTTTTATGTGAACGAGAACAGAAGTGAAGTGTTG
GGCGCGCCTGGTAAGCCCGTCAATGCGGTTTTTTCCGCCCCCAAAAGGATGAAGAAGTAA

Upstream 100 bases:

>100_bases
TGGCTGCTGGACACTAACGTCATTAAAGCCCGCGGAAGCGTTGACATGGTTCTGTACCTTGAAGACGGCTTCAGCGGCTT
AGCCCGAGGAGAAAAACGTC

Downstream 100 bases:

>100_bases
ATGGCGGTCATTCAGGCTACAGGGTTGCGCAAGCAATACGGTTCGCGCGAAGTGGTCTGCGGCGTTTCCCTGAATGTGAA
ACAGGGTGAAATTGTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Lipopolysaccharide Transport Periplasmic Protein LptA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNRISITGHMIMVLLACLVLQAAPATAAEDIPTSITSKTMTYDANAQLIIFEQDVYVQRGEFELWADSISVYLDKNASAA
AKQNDAEGPAIDAGQINRLVAEGNVRMKQLTKSGECRKATYKVSEGLLVMEGDPVLRDEGNSIGGQEIRFYVNENRSEVL
GAPGKPVNAVFSAPKRMKK

Sequences:

>Translated_179_residues
MNRISITGHMIMVLLACLVLQAAPATAAEDIPTSITSKTMTYDANAQLIIFEQDVYVQRGEFELWADSISVYLDKNASAA
AKQNDAEGPAIDAGQINRLVAEGNVRMKQLTKSGECRKATYKVSEGLLVMEGDPVLRDEGNSIGGQEIRFYVNENRSEVL
GAPGKPVNAVFSAPKRMKK
>Mature_179_residues
MNRISITGHMIMVLLACLVLQAAPATAAEDIPTSITSKTMTYDANAQLIIFEQDVYVQRGEFELWADSISVYLDKNASAA
AKQNDAEGPAIDAGQINRLVAEGNVRMKQLTKSGECRKATYKVSEGLLVMEGDPVLRDEGNSIGGQEIRFYVNENRSEVL
GAPGKPVNAVFSAPKRMKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19464; Mature: 19464

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRISITGHMIMVLLACLVLQAAPATAAEDIPTSITSKTMTYDANAQLIIFEQDVYVQRG
CCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCEEEECC
EFELWADSISVYLDKNASAAAKQNDAEGPAIDAGQINRLVAEGNVRMKQLTKSGECRKAT
CEEEEECEEEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCEEHHHCCCCCCEEE
YKVSEGLLVMEGDPVLRDEGNSIGGQEIRFYVNENRSEVLGAPGKPVNAVFSAPKRMKK
EEECCCEEEEECCCEEECCCCCCCCCEEEEEEECCCHHCCCCCCCCHHHHHCCHHHHCC
>Mature Secondary Structure
MNRISITGHMIMVLLACLVLQAAPATAAEDIPTSITSKTMTYDANAQLIIFEQDVYVQRG
CCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCEEEECC
EFELWADSISVYLDKNASAAAKQNDAEGPAIDAGQINRLVAEGNVRMKQLTKSGECRKAT
CEEEEECEEEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCEEHHHCCCCCCEEE
YKVSEGLLVMEGDPVLRDEGNSIGGQEIRFYVNENRSEVLGAPGKPVNAVFSAPKRMKK
EEECCCEEEEECCCEEECCCCCCCCCEEEEEEECCCHHCCCCCCCCHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA