Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is mod [H]

Identifier: 78356786

GI number: 78356786

Start: 1800075

End: 1801412

Strand: Reverse

Name: mod [H]

Synonym: Dde_1743

Alternate gene names: 78356786

Gene position: 1801412-1800075 (Counterclockwise)

Preceding gene: 78356787

Following gene: 78356785

Centisome position: 48.29

GC content: 42.15

Gene sequence:

>1338_bases
ATGTATCCGCGGCTTAAGATTGCACGTTCACTTCTTACCCATGACGGCGTTATCTTTATCAGCATTGATGATGGCGAGCA
GCCTAATTTACGTAAAATTTGTGATGAAATTTTTGGTGAAGAGAACTTCATCTCTTGCATCATGCGCAAAAGAAAAAAGG
AAATTTCTAGCGACTCAAAAAATGTATCTATTCAAGGTGAATATGTTTTAGCATATGCTAAGTCAAACGAAGTTAGCTTT
ATGTCAGAACCTCTTTCTGAAAAATACATCGCAAAAACATATAAAGAGCCTACGCGCGAATTTCCTGAGGGGAAATGGAG
ACCCGTTCCAATCACTGTATCTAAAGGACTTACAGGTGGTGGGTATAGGTATTCTATAACTACGCCAGGAGGTACTACTC
ATGATCGATTGTGGGCTTACCCAAAAGAAGGATATGAGCGGCTATTAAAGTCTGGACGGGTTTATTTTGGAGCTAATAAA
AATGGTGTACCACAGCGCGTAATATATGCGCATGAAAGCAATGGACAACCTACAACAAATTACTGGGACAATTCACCAAC
CAACAAAGAGGGAAAGAAAGAGGTTTTAAACATCTTTGGCGATAATGTTTTTGATACACCAAAACCTACAGCCTTGTTAC
AAAGGCTGATTGCCCTTGTGTCAAAAGAAGAAGATATAATTCTTGATTTTTTCTCTGGGTCATGTGCTACAGCGCATGCT
GTGATGAAAGGCAATGTGTATGAAAAAACTAAGCGGAAATTCATTATGGTCCAACTCCCTGAACCGTGCGACAAAAACTC
ATCAGCTTTTAAGTCTGGCTTTTCTACTATCGCTGAACTAGGGAAAGAACGTATTCGAAGAGTGATTTCTCAGCTCAGCG
AAGATAATCTTAGCTATTCAGGTGATCTCGGTTTTAAAGTCTTCAAACTCGAAAGCAGCAACATTGTTGCTTGGAACCCA
GACAAATCTGACCTTGAGAATACCCTTATGGCTCATTCTGAGCATCTTGTCCCCGGCAGAAGCGAACAGGATGTGCTTTA
TGAACTCCTTCTAAAACGTGGCGTTGAGCTGACAGCCCCTATTGAGGAAAAGGAAATCGCAGGCAAAAAGGTGTATAGCA
TCGGCTTCGGAGTTCTATTCGCCTGCCTCGATAAAAAAATTCAGCGCGATCAGATTGAAGAATTGGCACACGGCATCATT
GATTGGCACAAGGAGCTTGACCCCATCAGCGACACGCAGGTTGTATTCCGCGATAGTGCCTTTGAAAACGATGTCACCAA
GGCGAACATGACGGCCATTTTGGAACAAAGTGGTATCAAGCACGTCCGTAGTCTGTAG

Upstream 100 bases:

>100_bases
CAGTAACGGTTGGATGTCTCCTGCGGCTTTCGAAAATTTCAACCAGGAATACAAAAAAGTAGCTTAACTGGTACTCCACA
AAAATGTGGCAGGATCAATG

Downstream 100 bases:

>100_bases
TGGAGACCAGTATGAAACTTCACTTCGAAGATAACCTTGACTATCAGCTTGATGCTATACGTGCTGTTACTGACATATTT
AAAGGGCAGGAGCGCAACGC

Product: adenine specific DNA methylase Mod-like

Products: NA

Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF
MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK
NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA
VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP
DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII
DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL

Sequences:

>Translated_445_residues
MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF
MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK
NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA
VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP
DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII
DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL
>Mature_445_residues
MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF
MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK
NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA
VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP
DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII
DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL

Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]

COG id: COG2189

COG function: function code L; Adenine specific DNA methylase Mod

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002295
- InterPro:   IPR002941
- InterPro:   IPR002052 [H]

Pfam domain/function: PF01555 N6_N4_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 50225; Mature: 50225

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSK
CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
NVSIQGEYVLAYAKSNEVSFMSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGG
CEEEECCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
GYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANKNGVPQRVIYAHESNGQPTTN
CEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC
YWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYS
HHCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GDLGFKVFKLESSNIVAWNPDKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAP
CCCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECC
IEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGIIDWHKELDPISDTQVVFRDSA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
FENDVTKANMTAILEQSGIKHVRSL
CCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSK
CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
NVSIQGEYVLAYAKSNEVSFMSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGG
CEEEECCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
GYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANKNGVPQRVIYAHESNGQPTTN
CEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC
YWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA
CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYS
HHCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GDLGFKVFKLESSNIVAWNPDKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAP
CCCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECC
IEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGIIDWHKELDPISDTQVVFRDSA
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
FENDVTKANMTAILEQSGIKHVRSL
CCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387444; 11677609 [H]