| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is mod [H]
Identifier: 78356786
GI number: 78356786
Start: 1800075
End: 1801412
Strand: Reverse
Name: mod [H]
Synonym: Dde_1743
Alternate gene names: 78356786
Gene position: 1801412-1800075 (Counterclockwise)
Preceding gene: 78356787
Following gene: 78356785
Centisome position: 48.29
GC content: 42.15
Gene sequence:
>1338_bases ATGTATCCGCGGCTTAAGATTGCACGTTCACTTCTTACCCATGACGGCGTTATCTTTATCAGCATTGATGATGGCGAGCA GCCTAATTTACGTAAAATTTGTGATGAAATTTTTGGTGAAGAGAACTTCATCTCTTGCATCATGCGCAAAAGAAAAAAGG AAATTTCTAGCGACTCAAAAAATGTATCTATTCAAGGTGAATATGTTTTAGCATATGCTAAGTCAAACGAAGTTAGCTTT ATGTCAGAACCTCTTTCTGAAAAATACATCGCAAAAACATATAAAGAGCCTACGCGCGAATTTCCTGAGGGGAAATGGAG ACCCGTTCCAATCACTGTATCTAAAGGACTTACAGGTGGTGGGTATAGGTATTCTATAACTACGCCAGGAGGTACTACTC ATGATCGATTGTGGGCTTACCCAAAAGAAGGATATGAGCGGCTATTAAAGTCTGGACGGGTTTATTTTGGAGCTAATAAA AATGGTGTACCACAGCGCGTAATATATGCGCATGAAAGCAATGGACAACCTACAACAAATTACTGGGACAATTCACCAAC CAACAAAGAGGGAAAGAAAGAGGTTTTAAACATCTTTGGCGATAATGTTTTTGATACACCAAAACCTACAGCCTTGTTAC AAAGGCTGATTGCCCTTGTGTCAAAAGAAGAAGATATAATTCTTGATTTTTTCTCTGGGTCATGTGCTACAGCGCATGCT GTGATGAAAGGCAATGTGTATGAAAAAACTAAGCGGAAATTCATTATGGTCCAACTCCCTGAACCGTGCGACAAAAACTC ATCAGCTTTTAAGTCTGGCTTTTCTACTATCGCTGAACTAGGGAAAGAACGTATTCGAAGAGTGATTTCTCAGCTCAGCG AAGATAATCTTAGCTATTCAGGTGATCTCGGTTTTAAAGTCTTCAAACTCGAAAGCAGCAACATTGTTGCTTGGAACCCA GACAAATCTGACCTTGAGAATACCCTTATGGCTCATTCTGAGCATCTTGTCCCCGGCAGAAGCGAACAGGATGTGCTTTA TGAACTCCTTCTAAAACGTGGCGTTGAGCTGACAGCCCCTATTGAGGAAAAGGAAATCGCAGGCAAAAAGGTGTATAGCA TCGGCTTCGGAGTTCTATTCGCCTGCCTCGATAAAAAAATTCAGCGCGATCAGATTGAAGAATTGGCACACGGCATCATT GATTGGCACAAGGAGCTTGACCCCATCAGCGACACGCAGGTTGTATTCCGCGATAGTGCCTTTGAAAACGATGTCACCAA GGCGAACATGACGGCCATTTTGGAACAAAGTGGTATCAAGCACGTCCGTAGTCTGTAG
Upstream 100 bases:
>100_bases CAGTAACGGTTGGATGTCTCCTGCGGCTTTCGAAAATTTCAACCAGGAATACAAAAAAGTAGCTTAACTGGTACTCCACA AAAATGTGGCAGGATCAATG
Downstream 100 bases:
>100_bases TGGAGACCAGTATGAAACTTCACTTCGAAGATAACCTTGACTATCAGCTTGATGCTATACGTGCTGTTACTGACATATTT AAAGGGCAGGAGCGCAACGC
Product: adenine specific DNA methylase Mod-like
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL
Sequences:
>Translated_445_residues MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL >Mature_445_residues MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSKNVSIQGEYVLAYAKSNEVSF MSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGGGYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANK NGVPQRVIYAHESNGQPTTNYWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYSGDLGFKVFKLESSNIVAWNP DKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAPIEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGII DWHKELDPISDTQVVFRDSAFENDVTKANMTAILEQSGIKHVRSL
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 50225; Mature: 50225
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSK CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC NVSIQGEYVLAYAKSNEVSFMSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGG CEEEECCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC GYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANKNGVPQRVIYAHESNGQPTTN CEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC YWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYS HHCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDLGFKVFKLESSNIVAWNPDKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAP CCCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECC IEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGIIDWHKELDPISDTQVVFRDSA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC FENDVTKANMTAILEQSGIKHVRSL CCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYPRLKIARSLLTHDGVIFISIDDGEQPNLRKICDEIFGEENFISCIMRKRKKEISSDSK CCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC NVSIQGEYVLAYAKSNEVSFMSEPLSEKYIAKTYKEPTREFPEGKWRPVPITVSKGLTGG CEEEECCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC GYRYSITTPGGTTHDRLWAYPKEGYERLLKSGRVYFGANKNGVPQRVIYAHESNGQPTTN CEEEEEECCCCCCCCCEECCCHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCC YWDNSPTNKEGKKEVLNIFGDNVFDTPKPTALLQRLIALVSKEEDIILDFFSGSCATAHA CCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH VMKGNVYEKTKRKFIMVQLPEPCDKNSSAFKSGFSTIAELGKERIRRVISQLSEDNLSYS HHCCCHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDLGFKVFKLESSNIVAWNPDKSDLENTLMAHSEHLVPGRSEQDVLYELLLKRGVELTAP CCCCEEEEEEECCCEEEECCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEECC IEEKEIAGKKVYSIGFGVLFACLDKKIQRDQIEELAHGIIDWHKELDPISDTQVVFRDSA CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC FENDVTKANMTAILEQSGIKHVRSL CCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]