Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356773

Identifier: 78356773

GI number: 78356773

Start: 1787842

End: 1789692

Strand: Direct

Name: 78356773

Synonym: Dde_1730

Alternate gene names: NA

Gene position: 1787842-1789692 (Clockwise)

Preceding gene: 78356764

Following gene: 78356783

Centisome position: 47.93

GC content: 54.35

Gene sequence:

>1851_bases
GTGTCTTTTTGTTCTCCTGCCATTGGTTCAAATTCGGCTTCAAACGCAGCCGCACCTGCCTACTTGCTTCCTCGTCCAAG
CGGATTATATTTCCGCATACGTATTCCAGCCGACCTGCAGCCGACGCTGGGAAGGACTGAGTATCGTCTTTCCCTTGGCA
CTTCGCACCTGAAGGAAGCCCGTCCAAAGGCTATGCGGCTGGCATCCAAGGCGCATGACATCTTTTCGGAAGTTCGACGA
CTGAAAACGAAATCGACCACTCTTGAAAACAGAAACCGAAAGGCCATGACTGAAGCGAATGAAACACTCCAAAACCATCT
TACCGACGAAAAGATTCGGGAACTTGTAGACAGGGAAATGAAGGAGACGCTAAACTATGAATTTGAGTTGCGCGTCAATC
GGGAAAGACCTTGGCAGGATAATGAGCTTGAAAAGCACTTAGCTTCCCGCCAGCGCATTGCCTCGGACATTCGCGAACAG
GCGGCACATGCCGATTATCGCGGCGTGAAGAATCTTGTCAGCGGGATTCTGGAGCAGGAAGGCATCAAGGTCTCGGAGAA
ATCCACGGACTACAAGAAGCTGTGCGACGCCCTTATGAAAGGCATTGCCAAGGCGTATGACGAAGCTGGCTCCATTGACT
TTTCACCGCTTGCCAGCAAGCTCTCGGAAGCTGAAACTGGCAAGACGGTTGTCGTCACGCAGCAACCTGCCGCTCCTTCC
CGCAAATCGCCCACCATCACCGAAGCCGTTGAGAAGTACATCAAGACCAAGACGGAAAGCGGTGAATGGAAAGTCACCAG
CGTGAAGGACTTGGCTCCGCAGCTTCGGCAGTTCGCGGAAATGGTCTCCAATGGCAAGAAACTGCCGACACACGAGATCA
CCCGCGACCACATGCGGAAATACCGCGAGGAACTGGTCAAGCTGCCCTCGCTCCGCTACCGCTGTCATTACAAGGGCAAG
AGCAAGGCTCAGCTCCTGAAAATGGACATTCCTGAGAACCACCGCCTCAAGCCAAAATCCATCAAGACGCGCTTTGACAA
TGTGCGCTCATTCATCAACTGGGCAGAGCTTGAGGGCTACGTGGACAAGGCAAAGCCTCTCAACGTGGCGTTGGCCTTCA
AAAAGAACACCCTCAAGGCGAAGCAGGCCAAGCGCCGCGCCTTCACCAGCGATGAACTGAAAGCCCTGTTCCACAGCGCG
CCTTACCAAGGCACGGCCACGGGCAAGCAGAAGTTCACAAAAGCATGGCAGTTCTGGGCACCGCTTATCGCCCTGTTTAC
AGGCGCACGTGTTGAAGAAATATGCCAGCTCCATCTGGACGACATCCGCGAAATCGACGGCGTTTCCTGCATCGACATCA
ATAACGAAGGCGACAAGGAACTCAAGACAGCCGCAGGCAAACGCATTGTCCCGGTCCATCCGTTCCTTATCAGGCTCGGC
CTGCTTGAGCGCGTGAAAACACTTAGGTCAAAAGGCGAACAACACCTGTTCTCCCGCAAGACCTTGAGCAAGCGCGAAGG
CAACGTCTCCGCCAACGTGACGCAGTGGTTCACGCGCTTCCGTCGTGATTGCGGCGTCGGCGCGGGTGAAGGCGAAGTCA
GCAACGTTACCTTCCATTCCTTCCGGCATACGTTCATCACATGGGCAAAGCTCCACGACATTGACCGCCGCAAATTGAAG
GAAGTCGTAGGCCACGAGAAAGGCGAGTTCGACGACATCACGGCAATCTATGAAGGCAGCTACCCTGCATCCACACTCTT
CCGCGATGTCATCCAGCCTGTGGACTGGGACAGGGAAATCACGCTTGACGCCCTTGTGCCGCATGGAAAGCAATGGATTA
AAAGCCGTTAG

Upstream 100 bases:

>100_bases
GCCAGCGCATACAAGCAGCTGTAATAGCTGAATTTTTAGCAGGCTTATATCCCAAAGCACCGTCTGGTACACAGCGGTGG
TACACAAGGGGTATAAGCCT

Downstream 100 bases:

>100_bases
AGCGTCTTTTTGAGGTTGTCATGATGGATTTCATATGGGTGAGGCAAAATGCACCTTAAAAGCGAAATGTGAAAGCTAAC
TTGCGGCTTTCTGCGTCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage-Related Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase; Phage Integerase; Integrase/Resolvase Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase-Like Protein; Prolidase (Xaa-Pro Dipeptidase

Number of amino acids: Translated: 616; Mature: 615

Protein sequence:

>616_residues
MSFCSPAIGSNSASNAAAPAYLLPRPSGLYFRIRIPADLQPTLGRTEYRLSLGTSHLKEARPKAMRLASKAHDIFSEVRR
LKTKSTTLENRNRKAMTEANETLQNHLTDEKIRELVDREMKETLNYEFELRVNRERPWQDNELEKHLASRQRIASDIREQ
AAHADYRGVKNLVSGILEQEGIKVSEKSTDYKKLCDALMKGIAKAYDEAGSIDFSPLASKLSEAETGKTVVVTQQPAAPS
RKSPTITEAVEKYIKTKTESGEWKVTSVKDLAPQLRQFAEMVSNGKKLPTHEITRDHMRKYREELVKLPSLRYRCHYKGK
SKAQLLKMDIPENHRLKPKSIKTRFDNVRSFINWAELEGYVDKAKPLNVALAFKKNTLKAKQAKRRAFTSDELKALFHSA
PYQGTATGKQKFTKAWQFWAPLIALFTGARVEEICQLHLDDIREIDGVSCIDINNEGDKELKTAAGKRIVPVHPFLIRLG
LLERVKTLRSKGEQHLFSRKTLSKREGNVSANVTQWFTRFRRDCGVGAGEGEVSNVTFHSFRHTFITWAKLHDIDRRKLK
EVVGHEKGEFDDITAIYEGSYPASTLFRDVIQPVDWDREITLDALVPHGKQWIKSR

Sequences:

>Translated_616_residues
MSFCSPAIGSNSASNAAAPAYLLPRPSGLYFRIRIPADLQPTLGRTEYRLSLGTSHLKEARPKAMRLASKAHDIFSEVRR
LKTKSTTLENRNRKAMTEANETLQNHLTDEKIRELVDREMKETLNYEFELRVNRERPWQDNELEKHLASRQRIASDIREQ
AAHADYRGVKNLVSGILEQEGIKVSEKSTDYKKLCDALMKGIAKAYDEAGSIDFSPLASKLSEAETGKTVVVTQQPAAPS
RKSPTITEAVEKYIKTKTESGEWKVTSVKDLAPQLRQFAEMVSNGKKLPTHEITRDHMRKYREELVKLPSLRYRCHYKGK
SKAQLLKMDIPENHRLKPKSIKTRFDNVRSFINWAELEGYVDKAKPLNVALAFKKNTLKAKQAKRRAFTSDELKALFHSA
PYQGTATGKQKFTKAWQFWAPLIALFTGARVEEICQLHLDDIREIDGVSCIDINNEGDKELKTAAGKRIVPVHPFLIRLG
LLERVKTLRSKGEQHLFSRKTLSKREGNVSANVTQWFTRFRRDCGVGAGEGEVSNVTFHSFRHTFITWAKLHDIDRRKLK
EVVGHEKGEFDDITAIYEGSYPASTLFRDVIQPVDWDREITLDALVPHGKQWIKSR
>Mature_615_residues
SFCSPAIGSNSASNAAAPAYLLPRPSGLYFRIRIPADLQPTLGRTEYRLSLGTSHLKEARPKAMRLASKAHDIFSEVRRL
KTKSTTLENRNRKAMTEANETLQNHLTDEKIRELVDREMKETLNYEFELRVNRERPWQDNELEKHLASRQRIASDIREQA
AHADYRGVKNLVSGILEQEGIKVSEKSTDYKKLCDALMKGIAKAYDEAGSIDFSPLASKLSEAETGKTVVVTQQPAAPSR
KSPTITEAVEKYIKTKTESGEWKVTSVKDLAPQLRQFAEMVSNGKKLPTHEITRDHMRKYREELVKLPSLRYRCHYKGKS
KAQLLKMDIPENHRLKPKSIKTRFDNVRSFINWAELEGYVDKAKPLNVALAFKKNTLKAKQAKRRAFTSDELKALFHSAP
YQGTATGKQKFTKAWQFWAPLIALFTGARVEEICQLHLDDIREIDGVSCIDINNEGDKELKTAAGKRIVPVHPFLIRLGL
LERVKTLRSKGEQHLFSRKTLSKREGNVSANVTQWFTRFRRDCGVGAGEGEVSNVTFHSFRHTFITWAKLHDIDRRKLKE
VVGHEKGEFDDITAIYEGSYPASTLFRDVIQPVDWDREITLDALVPHGKQWIKSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70269; Mature: 70138

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFCSPAIGSNSASNAAAPAYLLPRPSGLYFRIRIPADLQPTLGRTEYRLSLGTSHLKEA
CCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHH
RPKAMRLASKAHDIFSEVRRLKTKSTTLENRNRKAMTEANETLQNHLTDEKIRELVDREM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KETLNYEFELRVNRERPWQDNELEKHLASRQRIASDIREQAAHADYRGVKNLVSGILEQE
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
GIKVSEKSTDYKKLCDALMKGIAKAYDEAGSIDFSPLASKLSEAETGKTVVVTQQPAAPS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
RKSPTITEAVEKYIKTKTESGEWKVTSVKDLAPQLRQFAEMVSNGKKLPTHEITRDHMRK
CCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YREELVKLPSLRYRCHYKGKSKAQLLKMDIPENHRLKPKSIKTRFDNVRSFINWAELEGY
HHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDKAKPLNVALAFKKNTLKAKQAKRRAFTSDELKALFHSAPYQGTATGKQKFTKAWQFWA
HHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
PLIALFTGARVEEICQLHLDDIREIDGVSCIDINNEGDKELKTAAGKRIVPVHPFLIRLG
HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCEECCCHHHHHHH
LLERVKTLRSKGEQHLFSRKTLSKREGNVSANVTQWFTRFRRDCGVGAGEGEVSNVTFHS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FRHTFITWAKLHDIDRRKLKEVVGHEKGEFDDITAIYEGSYPASTLFRDVIQPVDWDREI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCE
TLDALVPHGKQWIKSR
EHHHHCCCCHHHHCCC
>Mature Secondary Structure 
SFCSPAIGSNSASNAAAPAYLLPRPSGLYFRIRIPADLQPTLGRTEYRLSLGTSHLKEA
CCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHH
RPKAMRLASKAHDIFSEVRRLKTKSTTLENRNRKAMTEANETLQNHLTDEKIRELVDREM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
KETLNYEFELRVNRERPWQDNELEKHLASRQRIASDIREQAAHADYRGVKNLVSGILEQE
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
GIKVSEKSTDYKKLCDALMKGIAKAYDEAGSIDFSPLASKLSEAETGKTVVVTQQPAAPS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCC
RKSPTITEAVEKYIKTKTESGEWKVTSVKDLAPQLRQFAEMVSNGKKLPTHEITRDHMRK
CCCCCHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
YREELVKLPSLRYRCHYKGKSKAQLLKMDIPENHRLKPKSIKTRFDNVRSFINWAELEGY
HHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VDKAKPLNVALAFKKNTLKAKQAKRRAFTSDELKALFHSAPYQGTATGKQKFTKAWQFWA
HHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
PLIALFTGARVEEICQLHLDDIREIDGVSCIDINNEGDKELKTAAGKRIVPVHPFLIRLG
HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCEECCCHHHHHHH
LLERVKTLRSKGEQHLFSRKTLSKREGNVSANVTQWFTRFRRDCGVGAGEGEVSNVTFHS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
FRHTFITWAKLHDIDRRKLKEVVGHEKGEFDDITAIYEGSYPASTLFRDVIQPVDWDREI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCCCCCE
TLDALVPHGKQWIKSR
EHHHHCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA