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The map label for this gene is ybgI [C]

Identifier: 78356772

GI number: 78356772

Start: 1786328

End: 1787320

Strand: Reverse

Name: ybgI [C]

Synonym: Dde_1729

Alternate gene names: 78356772

Gene position: 1787320-1786328 (Counterclockwise)

Preceding gene: 78356774

Following gene: 78356771

Centisome position: 47.91

GC content: 54.88

Gene sequence:

>993_bases
ATGCACCTGACTGACTTTATTCATATGATTGAACGCATAGCTCCCGTTTGCGGTGCTGCGGAATGGGATAACAGCGGTGT
GCAGGTGGCTTCGAGGTGCACGGAAATACACAGCGTTGCAGTTGCGCTTGACCCTTCGGAAGCCAATATCGAAAAAGCAG
TATCTCAGGGTGCCGATTTTTTTCTGGCACACCACCCGCTTGCGTTCAAGCCTCAGCCGCTCTCAGGCAATGACAGTTAT
TTCAGGTCTGTTTCACAGCTTATCACAAATGATATCTGTCTGTATTCGGCGCATACCTCGCTGGATGCCAACCCTGCAGG
CCCCGTCGGCTGGCTGGCAGAATCCCTGAAATTGCAGAACTGCAAAACGCTTGAGCCTACCGCCGCGAGCATGCAGCACA
GAATCATCGCCCCCTCTGCGGCCAGCGGCTCCATACCTGCAGTGATCGCCGGTTCCATCCGTTGCCGGCACATACAGGGT
ATCGGCTACGAATTCGAGTTTGACACTGAAGACATCGTTTACGAGACAGCAGCAGATCATATCAGGCAGGTTCTGCCCGC
CGGAACGTCTCTTCTGAAAGCAGAGGAACGCGCCGGCAGACGCGAACTGGGGCTGGGCATATCTGGTTCCCTCCCCTGCC
GGCTGAGCTGGCACGAGTTTGTACAGCTGCTGGAAAAAAGTGTAGAAAGAACATTCTGGACAACATGCGGACCTGTTCCT
GAAACTGTGGAAACAGTGGCGTACTGCACGGGGTCCGGCAGCTCTCTTGCCGAGACTGCCTTTGCCCGTGGCGCCGATGT
TTTTATTACCGGTGACGTGAAATACCACACAGCACTGGACACGACAGGCTGCATCATTGATGTAGGTCATTTTTCACTGG
AAGAAGAAATGATGCGCCGGTTTGCCGCCCTGCTGGCCGCCGGAGCACCCGATCTGGATATAACGTTCCTGCCTTCGCAG
GATCCCATACGGCTTCATCCGGTTCACGGCTGA

Upstream 100 bases:

>100_bases
AGCACTGGGAGTCCGGCTGCTGGAATACCAACGTGTTGCGCGGTGCTTTCACGTATACAAACGTCGAAGCGCCTTCTTTT
TTTCGACGGAGAAGGTTCAC

Downstream 100 bases:

>100_bases
GCCGCAAAAGCCCCGGCTCCGCCGGATATTTTGAAGCCATCAGGAGGACACGACATTGAGCCTGTACCTTAAGCAGATTG
AGCAGCTTGTAGCATTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MHLTDFIHMIERIAPVCGAAEWDNSGVQVASRCTEIHSVAVALDPSEANIEKAVSQGADFFLAHHPLAFKPQPLSGNDSY
FRSVSQLITNDICLYSAHTSLDANPAGPVGWLAESLKLQNCKTLEPTAASMQHRIIAPSAASGSIPAVIAGSIRCRHIQG
IGYEFEFDTEDIVYETAADHIRQVLPAGTSLLKAEERAGRRELGLGISGSLPCRLSWHEFVQLLEKSVERTFWTTCGPVP
ETVETVAYCTGSGSSLAETAFARGADVFITGDVKYHTALDTTGCIIDVGHFSLEEEMMRRFAALLAAGAPDLDITFLPSQ
DPIRLHPVHG

Sequences:

>Translated_330_residues
MHLTDFIHMIERIAPVCGAAEWDNSGVQVASRCTEIHSVAVALDPSEANIEKAVSQGADFFLAHHPLAFKPQPLSGNDSY
FRSVSQLITNDICLYSAHTSLDANPAGPVGWLAESLKLQNCKTLEPTAASMQHRIIAPSAASGSIPAVIAGSIRCRHIQG
IGYEFEFDTEDIVYETAADHIRQVLPAGTSLLKAEERAGRRELGLGISGSLPCRLSWHEFVQLLEKSVERTFWTTCGPVP
ETVETVAYCTGSGSSLAETAFARGADVFITGDVKYHTALDTTGCIIDVGHFSLEEEMMRRFAALLAAGAPDLDITFLPSQ
DPIRLHPVHG
>Mature_330_residues
MHLTDFIHMIERIAPVCGAAEWDNSGVQVASRCTEIHSVAVALDPSEANIEKAVSQGADFFLAHHPLAFKPQPLSGNDSY
FRSVSQLITNDICLYSAHTSLDANPAGPVGWLAESLKLQNCKTLEPTAASMQHRIIAPSAASGSIPAVIAGSIRCRHIQG
IGYEFEFDTEDIVYETAADHIRQVLPAGTSLLKAEERAGRRELGLGISGSLPCRLSWHEFVQLLEKSVERTFWTTCGPVP
ETVETVAYCTGSGSSLAETAFARGADVFITGDVKYHTALDTTGCIIDVGHFSLEEEMMRRFAALLAAGAPDLDITFLPSQ
DPIRLHPVHG

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921430, Length=126, Percent_Identity=29.3650793650794, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 35642; Mature: 35642

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLTDFIHMIERIAPVCGAAEWDNSGVQVASRCTEIHSVAVALDPSEANIEKAVSQGADF
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCE
FLAHHPLAFKPQPLSGNDSYFRSVSQLITNDICLYSAHTSLDANPAGPVGWLAESLKLQN
EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
CKTLEPTAASMQHRIIAPSAASGSIPAVIAGSIRCRHIQGIGYEFEFDTEDIVYETAADH
CCCCCCCHHHHCCEEECCCCCCCCCCEEEECCEEEEEEECCCEEEEECCHHHHHHHHHHH
IRQVLPAGTSLLKAEERAGRRELGLGISGSLPCRLSWHEFVQLLEKSVERTFWTTCGPVP
HHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCH
ETVETVAYCTGSGSSLAETAFARGADVFITGDVKYHTALDTTGCIIDVGHFSLEEEMMRR
HHHHHHEEECCCCCHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEECCCCCHHHHHHHH
FAALLAAGAPDLDITFLPSQDPIRLHPVHG
HHHHHHCCCCCCEEEECCCCCCEEEECCCC
>Mature Secondary Structure
MHLTDFIHMIERIAPVCGAAEWDNSGVQVASRCTEIHSVAVALDPSEANIEKAVSQGADF
CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCE
FLAHHPLAFKPQPLSGNDSYFRSVSQLITNDICLYSAHTSLDANPAGPVGWLAESLKLQN
EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHCC
CKTLEPTAASMQHRIIAPSAASGSIPAVIAGSIRCRHIQGIGYEFEFDTEDIVYETAADH
CCCCCCCHHHHCCEEECCCCCCCCCCEEEECCEEEEEEECCCEEEEECCHHHHHHHHHHH
IRQVLPAGTSLLKAEERAGRRELGLGISGSLPCRLSWHEFVQLLEKSVERTFWTTCGPVP
HHHHHHCCHHHHHHHHHCCHHHHCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCH
ETVETVAYCTGSGSSLAETAFARGADVFITGDVKYHTALDTTGCIIDVGHFSLEEEMMRR
HHHHHHEEECCCCCHHHHHHHHCCCCEEEECCEEEEEECCCCCCEEECCCCCHHHHHHHH
FAALLAAGAPDLDITFLPSQDPIRLHPVHG
HHHHHHCCCCCCEEEECCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]