| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356748
Identifier: 78356748
GI number: 78356748
Start: 1763362
End: 1764426
Strand: Reverse
Name: 78356748
Synonym: Dde_1705
Alternate gene names: NA
Gene position: 1764426-1763362 (Counterclockwise)
Preceding gene: 78356752
Following gene: 78356746
Centisome position: 47.3
GC content: 51.64
Gene sequence:
>1065_bases ATGGCTGCCGGAATATACATCGGTTCCACATCCGGTTACTCCGGAAAAAACATGGTCGTCATGGGGCTCGGCATGCGGCT TCAGAAAGACGGCTACAATGTAGGTTATATGAAACCGGTGGGCGCCGTTCCTCAGGAAATGGACGGAGTCATGGGCGATG AAGACGCTTTTTTCGTGCAAAGTGTACTCGGGCTGGAAGAGCCCGCCGAGCTTGTCACGCCCGTGGTTGTCACGCAGGAC TTCCGCGTCAGAGCTTTCAGCGGTCAGTGCGGCAACCTTATGCCTTCCATCGCTGAGGCATACGACACCCTGCAGCAGAA ACGTGATGTCATGCTGGTGGCCGGATCCGGCAGCATGTATTCCGGCAGATACTGCAACGTGGACGGTATACGTGTTGTCA AGGAACTCGGGCTCAAGGCTGTGATTATCGACAGACTGCACAAAGAGCTGAATTACGACTACCTTGTAGTACTGAAAGAC ACTCTCGGCGACAGTCTTGCCGGTGTGATTCTGAACGACATACCCGCAAACTACATCAATGAAGTCGACGGTCTTATCAA ACCGTTTCTTGAATCAAACGGTGTCAAGGTACTCGGCGTCATTCCCAAAGACCCCCTTATGGGCGCAATCAAGGTGGGTG ATCTGGCAGAAAGGCTCGGGGGTAAAGTCATTTCCGCTCAGAATAAAGCGGACAAAGTTGTGGAAAATTTTCTTATCGGC ACCATGCAGGTGGAAAACTTCATGACCCACTTCCGCAAAAACAAAAACTCCGCCGTCATTGTGGGCGGAGACAGGTCCGA CGTGCAGCTTGTCGCCCTTGAAGGCAACTGCCCGTGTCTGGTGCTTACGGGCAACCTGTATCCTAACGATATCATTCTTA CCCGCTCGGAAGTGCTCAATATTCCGATAGTCGTGGTACGTGACGACACCTACACTGTGGCTAAAAAAATGGAAGTCATT CTTTCGCGCCACAAGCTGCGTGATGTCATTAAAATCAGACAGGGCGCCCAGCTTGTCAGCTCTTCGCTGGATTTTGCGTA TCTTAAGGAAGTAATGGGCATATGA
Upstream 100 bases:
>100_bases CAGCCGGCAGGAGTCTGACCGGCCGGAAGACCGCCGCATGCGGGTAACAAACATCCGCCCCCGAAATATCATACGGTCAT AACCCGCACAGGAGGTCGCT
Downstream 100 bases:
>100_bases CGCAGCGACAGTCTGCCTGAACGGGAAAAGGGGCCGTCAGGCCCCTTTTTTTGCTGCACCGGCAGCCAGTCAGAATTTTT CTGCCGACACAGGATACAGA
Product: cobyrinic acid a,c-diamide synthase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MAAGIYIGSTSGYSGKNMVVMGLGMRLQKDGYNVGYMKPVGAVPQEMDGVMGDEDAFFVQSVLGLEEPAELVTPVVVTQD FRVRAFSGQCGNLMPSIAEAYDTLQQKRDVMLVAGSGSMYSGRYCNVDGIRVVKELGLKAVIIDRLHKELNYDYLVVLKD TLGDSLAGVILNDIPANYINEVDGLIKPFLESNGVKVLGVIPKDPLMGAIKVGDLAERLGGKVISAQNKADKVVENFLIG TMQVENFMTHFRKNKNSAVIVGGDRSDVQLVALEGNCPCLVLTGNLYPNDIILTRSEVLNIPIVVVRDDTYTVAKKMEVI LSRHKLRDVIKIRQGAQLVSSSLDFAYLKEVMGI
Sequences:
>Translated_354_residues MAAGIYIGSTSGYSGKNMVVMGLGMRLQKDGYNVGYMKPVGAVPQEMDGVMGDEDAFFVQSVLGLEEPAELVTPVVVTQD FRVRAFSGQCGNLMPSIAEAYDTLQQKRDVMLVAGSGSMYSGRYCNVDGIRVVKELGLKAVIIDRLHKELNYDYLVVLKD TLGDSLAGVILNDIPANYINEVDGLIKPFLESNGVKVLGVIPKDPLMGAIKVGDLAERLGGKVISAQNKADKVVENFLIG TMQVENFMTHFRKNKNSAVIVGGDRSDVQLVALEGNCPCLVLTGNLYPNDIILTRSEVLNIPIVVVRDDTYTVAKKMEVI LSRHKLRDVIKIRQGAQLVSSSLDFAYLKEVMGI >Mature_353_residues AAGIYIGSTSGYSGKNMVVMGLGMRLQKDGYNVGYMKPVGAVPQEMDGVMGDEDAFFVQSVLGLEEPAELVTPVVVTQDF RVRAFSGQCGNLMPSIAEAYDTLQQKRDVMLVAGSGSMYSGRYCNVDGIRVVKELGLKAVIIDRLHKELNYDYLVVLKDT LGDSLAGVILNDIPANYINEVDGLIKPFLESNGVKVLGVIPKDPLMGAIKVGDLAERLGGKVISAQNKADKVVENFLIGT MQVENFMTHFRKNKNSAVIVGGDRSDVQLVALEGNCPCLVLTGNLYPNDIILTRSEVLNIPIVVVRDDTYTVAKKMEVIL SRHKLRDVIKIRQGAQLVSSSLDFAYLKEVMGI
Specific function: Unknown
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF1212 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR010766 [H]
Pfam domain/function: PF01656 CbiA; PF07085 DRTGG [H]
EC number: NA
Molecular weight: Translated: 38526; Mature: 38395
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGIYIGSTSGYSGKNMVVMGLGMRLQKDGYNVGYMKPVGAVPQEMDGVMGDEDAFFVQ CCCEEEEECCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHH SVLGLEEPAELVTPVVVTQDFRVRAFSGQCGNLMPSIAEAYDTLQQKRDVMLVAGSGSMY HHHCCCCCHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC SGRYCNVDGIRVVKELGLKAVIIDRLHKELNYDYLVVLKDTLGDSLAGVILNDIPANYIN CCEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHH EVDGLIKPFLESNGVKVLGVIPKDPLMGAIKVGDLAERLGGKVISAQNKADKVVENFLIG HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHCCEEEECCCHHHHHHHHHHHH TMQVENFMTHFRKNKNSAVIVGGDRSDVQLVALEGNCPCLVLTGNLYPNDIILTRSEVLN HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEEEEHHHHCC IPIVVVRDDTYTVAKKMEVILSRHKLRDVIKIRQGAQLVSSSLDFAYLKEVMGI CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure AAGIYIGSTSGYSGKNMVVMGLGMRLQKDGYNVGYMKPVGAVPQEMDGVMGDEDAFFVQ CCEEEEECCCCCCCCCEEEEECCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHH SVLGLEEPAELVTPVVVTQDFRVRAFSGQCGNLMPSIAEAYDTLQQKRDVMLVAGSGSMY HHHCCCCCHHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCC SGRYCNVDGIRVVKELGLKAVIIDRLHKELNYDYLVVLKDTLGDSLAGVILNDIPANYIN CCEECCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCHHHHH EVDGLIKPFLESNGVKVLGVIPKDPLMGAIKVGDLAERLGGKVISAQNKADKVVENFLIG HHHHHHHHHHCCCCCEEEEECCCCCCCCEEEHHHHHHHHCCEEEECCCHHHHHHHHHHHH TMQVENFMTHFRKNKNSAVIVGGDRSDVQLVALEGNCPCLVLTGNLYPNDIILTRSEVLN HHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEEEEHHHHCC IPIVVVRDDTYTVAKKMEVILSRHKLRDVIKIRQGAQLVSSSLDFAYLKEVMGI CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]