| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356743
Identifier: 78356743
GI number: 78356743
Start: 1756734
End: 1758524
Strand: Direct
Name: 78356743
Synonym: Dde_1700
Alternate gene names: NA
Gene position: 1756734-1758524 (Clockwise)
Preceding gene: 78356730
Following gene: 78356747
Centisome position: 47.09
GC content: 57.62
Gene sequence:
>1791_bases ATGCAGGAATGGAGAATTTTTTTGCCAAATAGCAGGGAAGACATTCGTCAGGCTTTTTTTGATGATGCCCAGAATCATCT GGCAGCAATGGGAGTTCTGCTTCTGGAACTGGAAGTGGCAGGAAAGGATGCCGACCATGAACTGCTGGATGGTCTGCTGC GCGCTGCGCACGCGCTGAAATGCTCTGCAGGCTTTCTGGATTACCGCCGTGCGTTCACGCTGGCACGGGCTCTGGAGTCT TTTCTTGACATGTGGCGCGAAGGGACGCTGGTTCCGGATGAATCGACAGCCGCGCGCGTGGAAAAGGCCTTTGATATTCT GGCGGTCCTTCTGACTCCCTCAGGTACATCTGAAAGCGAGCAGGCCGCGAGGAGCGAAAAAAGTGCTGAAGCGGAAGCGC TGGCCGCCGTGCTGGATGCCGCCGGCGGGGTTGAAGAAAACGGCGGAGGAACACAGTGCCCGGCGCAATACCGGGTGTAC GCTCCGGACGGTGCGCTGGTGTTTGAAGGCCATTGCCCCGACCTGCACCTTGCGGGAAAAACCGGCAGCAACCTGTATGT TCTTGAGTTTATCTATGAAGAAGATCTGAACCGGAAGGATCTTTCACCTCAGGCGCTGCTCGGTTTTCTGCAGAAGAGCG GTTACATTCTGGCCATCGGCGGGCGTACTGTGCCGGTGGGATACGAACCGGCCGACGTTTTATGTGTTCTGTATGCTTCT TTTCTTGAAAAAGACCTTATCGCCGCGGTGTTTCAGATTGCAGCGGAAAAGGTGCACCCCGTTGACCTGCAGGACCTGCT TGCCGGAGAAGCCATGTGGCAGGCAGCTGTGGTGAAGGATGCCGAAGATGCGTTGCTGCACGCCGTCAGAGAGCCGCACA AGGACAGTGTGGATGAACTGGTAAGGCAGTATGACAATGCCATGGAGAAACTGCGCGCTGCTTCTGACGAGGACAAGGAA CCGCTGGAAGGCTGGGACATTGAAGCGGTTGTTTCTCTGGGGAACGGCGGGGAAGTTGCCGACCCGTTCTGCATGGCTGT CGAATTGCATGCCGCCGATCCTGCGGGGGCTGAAAATACTGCATACGATGCGACGGCCGCCTCGGACTGTGCAGTTGCGC GGGGACAGACAGCAGACGCTGACGAGGCCGGACTGGTGGCGGAGTTCGAGGACAGTTTCATGGAAGATGAGGCAGAGCTT CTTTTGAATGAACTGCCGGAAGAGCATCCCCTGCGGGCTGCCTACGAAGCGGAGCCACAGGGCGACGAAGAGTTTTTCCG CGATACGGAAGAGCAGCCCGATTTATCTTACCTGAATGAAGCCTTGCCTGATGAGACTCCTGCCGGCGGCGTTGTGTTTG ATCTGGCCATGCCGGTGGCAGAAAGCGATACCGGGTTGCAGTCTGCGTCCTTGCAGGATGCCAAACACAAGGGAGAGGCT GAAATGATTGCAGGATTTGCAGTGGGACCGGCGCAGGACGGCAACGCGGGCGTATTGCAGCTTGCCGGTGATATCACCAT CGAGCGCAGCGCCCAGTTGCAGGAGGCTTTTCAGGAGGCTCTTTCACGCTACGAAGTGCTGCGTATTGATTCGCAGCAGC TGGAATCGGCAGATCTTACGCTGGTGCAGCTGCTGTGTGCAGCAGCTGCCCAGGCCAAGGAAAGAGGTGGGCGCCTGGAA AGCGAGGGGCTGCCTTCCGCAGGCCTGATGCAGACTCTTGTGCTGGCAGGTTTTGATGATGCCGCCATGAAGCGCAGGGG GCTTGAAACGTTTACGGGGTCCGGCGACTGA
Upstream 100 bases:
>100_bases CAAGAAAGTCGCGCGGTCTGTCCGGCACTATCATGCGCTGGCGCATCGGCATGCTATGTGGTAATTTGCAGTGGTGGAAA TTGTGCACGGTTTATCTGTC
Downstream 100 bases:
>100_bases GCGCGGCAGATGATGATTATGCAGCAGGCCTGCTTCTGAACAGTTTTTTACTTTTGAGATTTGCCGGACAGGCAGATTAA CGCAGCCAGCCCCTCTGAGA
Product: CheA signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLDGLLRAAHALKCSAGFLDYRRAFTLARALES FLDMWREGTLVPDESTAARVEKAFDILAVLLTPSGTSESEQAARSEKSAEAEALAAVLDAAGGVEENGGGTQCPAQYRVY APDGALVFEGHCPDLHLAGKTGSNLYVLEFIYEEDLNRKDLSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYAS FLEKDLIAAVFQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDELVRQYDNAMEKLRAASDEDKE PLEGWDIEAVVSLGNGGEVADPFCMAVELHAADPAGAENTAYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAEL LLNELPEEHPLRAAYEAEPQGDEEFFRDTEEQPDLSYLNEALPDETPAGGVVFDLAMPVAESDTGLQSASLQDAKHKGEA EMIAGFAVGPAQDGNAGVLQLAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLTLVQLLCAAAAQAKERGGRLE SEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD
Sequences:
>Translated_596_residues MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLDGLLRAAHALKCSAGFLDYRRAFTLARALES FLDMWREGTLVPDESTAARVEKAFDILAVLLTPSGTSESEQAARSEKSAEAEALAAVLDAAGGVEENGGGTQCPAQYRVY APDGALVFEGHCPDLHLAGKTGSNLYVLEFIYEEDLNRKDLSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYAS FLEKDLIAAVFQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDELVRQYDNAMEKLRAASDEDKE PLEGWDIEAVVSLGNGGEVADPFCMAVELHAADPAGAENTAYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAEL LLNELPEEHPLRAAYEAEPQGDEEFFRDTEEQPDLSYLNEALPDETPAGGVVFDLAMPVAESDTGLQSASLQDAKHKGEA EMIAGFAVGPAQDGNAGVLQLAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLTLVQLLCAAAAQAKERGGRLE SEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD >Mature_596_residues MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLDGLLRAAHALKCSAGFLDYRRAFTLARALES FLDMWREGTLVPDESTAARVEKAFDILAVLLTPSGTSESEQAARSEKSAEAEALAAVLDAAGGVEENGGGTQCPAQYRVY APDGALVFEGHCPDLHLAGKTGSNLYVLEFIYEEDLNRKDLSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYAS FLEKDLIAAVFQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDELVRQYDNAMEKLRAASDEDKE PLEGWDIEAVVSLGNGGEVADPFCMAVELHAADPAGAENTAYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAEL LLNELPEEHPLRAAYEAEPQGDEEFFRDTEEQPDLSYLNEALPDETPAGGVVFDLAMPVAESDTGLQSASLQDAKHKGEA EMIAGFAVGPAQDGNAGVLQLAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLTLVQLLCAAAAQAKERGGRLE SEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD
Specific function: Unknown
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64053; Mature: 64053
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS50894 HPT ; PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLDGLLRAAHALK CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH CSAGFLDYRRAFTLARALESFLDMWREGTLVPDESTAARVEKAFDILAVLLTPSGTSESE HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH QAARSEKSAEAEALAAVLDAAGGVEENGGGTQCPAQYRVYAPDGALVFEGHCPDLHLAGK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCC TGSNLYVLEFIYEEDLNRKDLSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYAS CCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHCCEEEEECCEEECCCCCHHHHHHHHHHH FLEKDLIAAVFQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDEL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH VRQYDNAMEKLRAASDEDKEPLEGWDIEAVVSLGNGGEVADPFCMAVELHAADPAGAENT HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCC AYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAELLLNELPEEHPLRAAYEAEPQ CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDEEFFRDTEEQPDLSYLNEALPDETPAGGVVFDLAMPVAESDTGLQSASLQDAKHKGEA CCHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCH EMIAGFAVGPAQDGNAGVLQLAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLT HEEEEEECCCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVQLLCAAAAQAKERGGRLESEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQEWRIFLPNSREDIRQAFFDDAQNHLAAMGVLLLELEVAGKDADHELLDGLLRAAHALK CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH CSAGFLDYRRAFTLARALESFLDMWREGTLVPDESTAARVEKAFDILAVLLTPSGTSESE HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCHHH QAARSEKSAEAEALAAVLDAAGGVEENGGGTQCPAQYRVYAPDGALVFEGHCPDLHLAGK HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECCCCCEEECCC TGSNLYVLEFIYEEDLNRKDLSPQALLGFLQKSGYILAIGGRTVPVGYEPADVLCVLYAS CCCCEEEEEEEEHHCCCCCCCCHHHHHHHHHHCCEEEEECCEEECCCCCHHHHHHHHHHH FLEKDLIAAVFQIAAEKVHPVDLQDLLAGEAMWQAAVVKDAEDALLHAVREPHKDSVDEL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH VRQYDNAMEKLRAASDEDKEPLEGWDIEAVVSLGNGGEVADPFCMAVELHAADPAGAENT HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCC AYDATAASDCAVARGQTADADEAGLVAEFEDSFMEDEAELLLNELPEEHPLRAAYEAEPQ CCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GDEEFFRDTEEQPDLSYLNEALPDETPAGGVVFDLAMPVAESDTGLQSASLQDAKHKGEA CCHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCH EMIAGFAVGPAQDGNAGVLQLAGDITIERSAQLQEAFQEALSRYEVLRIDSQQLESADLT HEEEEEECCCCCCCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LVQLLCAAAAQAKERGGRLESEGLPSAGLMQTLVLAGFDDAAMKRRGLETFTGSGD HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA