| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is ywrD [H]
Identifier: 78356684
GI number: 78356684
Start: 1692011
End: 1693639
Strand: Direct
Name: ywrD [H]
Synonym: Dde_1641
Alternate gene names: 78356684
Gene position: 1692011-1693639 (Clockwise)
Preceding gene: 78356678
Following gene: 78356688
Centisome position: 45.36
GC content: 60.16
Gene sequence:
>1629_bases GTGAAAAGTTCCTTGCCTGTTTTTGAGTTCGCATCACGTCGTTCACCTGTTTATGCACCGGAGGTCATGGTTGCTGCGTC ACAGCCTCTGGCTGTCAGCGCCGGTCTGGGCATTGCTGCCCGTGGCGGCAGCGCCGCCGATATGGCCGTGGCCGTGGCGG CCGTGCTTGCCGTTGTCGAGCCGTGCAGCACCGGTCTGGGAGGTGATGCGTTTGCTCTGTACTACGATTCAGCCACACAG CATGTGGCGGCGCTGAACGGTTCGGGAAAAAGCGGAGGCGGCCATACCCCCGAAGCTGTTTTTTCCGCCGGGTATGACGC AGTGCCGGCAAGGCACGGGCTGGCAGTAACTGTGCCGGGGGCATGTGCCGCATGGTGTGAACTGCATAGAAAATACGGCC GGCTGGATCTTGCCGAGGTATTGGCTCCTGCAGTGCGCCTTGCCCGTGACGGCTTTGCCGTCGGACCCGTTACCGCGCGG TTATGGGCAACCGAAGAAGCGCTGCTGCGTGGCAGCGAAGGTGGAAAAAGTCTGCTGGTCCGCGGAAGGGCTCCCCGTGC GGGCGAACGTATCCGCAACCATGCGCTTGCCCGTCTTTTGAAAAATATAGCTCGCAAGGGAGCTGCAGCATTGTACGAAG GGGCTGCTGCCGCGGCTCTGGCCGATGCGGTTCAGGCTGCAGGCGGCGTGCTGACCGCGGATGACATGAGCCGGTGCAGG GCGCAGTGGCAGACACCGGCCAGTACCGTGTACGGCGGTGTACGCGTGCATGAATGCCCGCCCAACGGTCAGGGGCTGGT GGCTCTGAGTGCGCTCAACATACTTGCTGCCTTGAGTGATAAGATAAAAGGTGCCCCTGTGTCCGCAGAACGTCTGCACT GTATGATAGAGTCTCTGCGGCTCGGTTTCGCTGACGGAGCAGCGTATATTGCAGACCCTGATTTTTCGGCCGTTCCTGCG GATGGATTGCTTTCCGGGGAATATGCGGCCGCACGGGCTGCATTGATAGACTCCGGCAGGGCTTTGCCGCAGGCCGTGTG CGGTGTTCCCCAGTCTTCTTCCGATACTGTACAGTTCTGCGTGACCGACAGAGACGGTAATGCCTGTTCCATGGTGAACA GCATATACATGACGTTCGGCAGCGGAGTAGTTGTGCCTTCTTTGGGACTGGCTCTGCAGAACAGGGGGCACAACTTTGTG TTGCGGCAGGATCATCCCAACTGCCTTGCGCCGTATAAACGACCTTACCATACGATAATTCCGTGCCTGACAACGCACGA AAACGGTGAACTGCACGGAGTTATGGGAGTTATGGGCGGATTTATGCAGCCACAGGGGCATGTGCAGATTCTCAGTGCTC TGCTGGATGATGGATGCAATCCTCAGCAGGCTCTGGACAGGCTCCGCTTCTGCATTCAGCCTGACGGTGCAGCCAGTGTT GTGGCGCTGGAAGAGGGCATGGATGCGGGGCTGGCGGACAGCCTGAAGGCCAGAGGTCATGATGTCCGGCCAGTCAGCGG ATACGCCCGCGACCTGTTCGGACGCGGGCAGATTATCCTGCGGCAGCCCAACGGATTCTGGGAAGCCGGCAGTGACGGGC GCGCAGACGGACTTGCGCTGGGTTTCTGA
Upstream 100 bases:
>100_bases CTTATTGTTAAACCAGCTTGTAATGCTGCGCAAGGTTAAATCCGTTATTTGTGGTAGTTGAGTCTTCAGTCAGCAGAAAA TACGTCAGGAGTGCCGTATC
Downstream 100 bases:
>100_bases TCACAGAGATATGTTGGTGAACAGCCCGCGCAGCATTTCCTGTGATACAGTGGGCATGGGTGTCTGTATCCGTGTAGGGT ACTGCTCGCTTACTTTCAGC
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 542; Mature: 542
Protein sequence:
>542_residues MKSSLPVFEFASRRSPVYAPEVMVAASQPLAVSAGLGIAARGGSAADMAVAVAAVLAVVEPCSTGLGGDAFALYYDSATQ HVAALNGSGKSGGGHTPEAVFSAGYDAVPARHGLAVTVPGACAAWCELHRKYGRLDLAEVLAPAVRLARDGFAVGPVTAR LWATEEALLRGSEGGKSLLVRGRAPRAGERIRNHALARLLKNIARKGAAALYEGAAAAALADAVQAAGGVLTADDMSRCR AQWQTPASTVYGGVRVHECPPNGQGLVALSALNILAALSDKIKGAPVSAERLHCMIESLRLGFADGAAYIADPDFSAVPA DGLLSGEYAAARAALIDSGRALPQAVCGVPQSSSDTVQFCVTDRDGNACSMVNSIYMTFGSGVVVPSLGLALQNRGHNFV LRQDHPNCLAPYKRPYHTIIPCLTTHENGELHGVMGVMGGFMQPQGHVQILSALLDDGCNPQQALDRLRFCIQPDGAASV VALEEGMDAGLADSLKARGHDVRPVSGYARDLFGRGQIILRQPNGFWEAGSDGRADGLALGF
Sequences:
>Translated_542_residues MKSSLPVFEFASRRSPVYAPEVMVAASQPLAVSAGLGIAARGGSAADMAVAVAAVLAVVEPCSTGLGGDAFALYYDSATQ HVAALNGSGKSGGGHTPEAVFSAGYDAVPARHGLAVTVPGACAAWCELHRKYGRLDLAEVLAPAVRLARDGFAVGPVTAR LWATEEALLRGSEGGKSLLVRGRAPRAGERIRNHALARLLKNIARKGAAALYEGAAAAALADAVQAAGGVLTADDMSRCR AQWQTPASTVYGGVRVHECPPNGQGLVALSALNILAALSDKIKGAPVSAERLHCMIESLRLGFADGAAYIADPDFSAVPA DGLLSGEYAAARAALIDSGRALPQAVCGVPQSSSDTVQFCVTDRDGNACSMVNSIYMTFGSGVVVPSLGLALQNRGHNFV LRQDHPNCLAPYKRPYHTIIPCLTTHENGELHGVMGVMGGFMQPQGHVQILSALLDDGCNPQQALDRLRFCIQPDGAASV VALEEGMDAGLADSLKARGHDVRPVSGYARDLFGRGQIILRQPNGFWEAGSDGRADGLALGF >Mature_542_residues MKSSLPVFEFASRRSPVYAPEVMVAASQPLAVSAGLGIAARGGSAADMAVAVAAVLAVVEPCSTGLGGDAFALYYDSATQ HVAALNGSGKSGGGHTPEAVFSAGYDAVPARHGLAVTVPGACAAWCELHRKYGRLDLAEVLAPAVRLARDGFAVGPVTAR LWATEEALLRGSEGGKSLLVRGRAPRAGERIRNHALARLLKNIARKGAAALYEGAAAAALADAVQAAGGVLTADDMSRCR AQWQTPASTVYGGVRVHECPPNGQGLVALSALNILAALSDKIKGAPVSAERLHCMIESLRLGFADGAAYIADPDFSAVPA DGLLSGEYAAARAALIDSGRALPQAVCGVPQSSSDTVQFCVTDRDGNACSMVNSIYMTFGSGVVVPSLGLALQNRGHNFV LRQDHPNCLAPYKRPYHTIIPCLTTHENGELHGVMGVMGGFMQPQGHVQILSALLDDGCNPQQALDRLRFCIQPDGAASV VALEEGMDAGLADSLKARGHDVRPVSGYARDLFGRGQIILRQPNGFWEAGSDGRADGLALGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=524, Percent_Identity=25.9541984732824, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI73915090, Length=524, Percent_Identity=25.9541984732824, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI73915096, Length=524, Percent_Identity=25.9541984732824, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI73915094, Length=524, Percent_Identity=25.9541984732824, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI113429324, Length=524, Percent_Identity=25.1908396946565, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI113429326, Length=529, Percent_Identity=24.7637051039698, Blast_Score=129, Evalue=9e-30, Organism=Homo sapiens, GI109148539, Length=491, Percent_Identity=29.5315682281059, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI153266885, Length=378, Percent_Identity=25.6613756613757, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI153266901, Length=376, Percent_Identity=26.063829787234, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI153266907, Length=377, Percent_Identity=24.1379310344828, Blast_Score=80, Evalue=3e-15, Organism=Escherichia coli, GI1789856, Length=552, Percent_Identity=29.7101449275362, Blast_Score=196, Evalue=4e-51, Organism=Caenorhabditis elegans, GI17506189, Length=516, Percent_Identity=24.031007751938, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17542894, Length=431, Percent_Identity=24.8259860788863, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI212646519, Length=453, Percent_Identity=22.5165562913907, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI72000294, Length=453, Percent_Identity=22.5165562913907, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI193208247, Length=579, Percent_Identity=21.4162348877375, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI193208245, Length=579, Percent_Identity=21.4162348877375, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24642670, Length=500, Percent_Identity=25.6, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24642666, Length=500, Percent_Identity=25.6, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI161077878, Length=500, Percent_Identity=25.4, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI45551474, Length=500, Percent_Identity=25.6, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI161077880, Length=500, Percent_Identity=25.4, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI18859893, Length=543, Percent_Identity=24.3093922651934, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI18859741, Length=528, Percent_Identity=23.2954545454545, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI161077496, Length=420, Percent_Identity=23.8095238095238, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 56136; Mature: 56136
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLPVFEFASRRSPVYAPEVMVAASQPLAVSAGLGIAARGGSAADMAVAVAAVLAVVE CCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHH PCSTGLGGDAFALYYDSATQHVAALNGSGKSGGGHTPEAVFSAGYDAVPARHGLAVTVPG HHCCCCCCCEEEEEECCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCC ACAAWCELHRKYGRLDLAEVLAPAVRLARDGFAVGPVTARLWATEEALLRGSEGGKSLLV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCEEEE RGRAPRAGERIRNHALARLLKNIARKGAAALYEGAAAAALADAVQAAGGVLTADDMSRCR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH AQWQTPASTVYGGVRVHECPPNGQGLVALSALNILAALSDKIKGAPVSAERLHCMIESLR HHCCCCHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGFADGAAYIADPDFSAVPADGLLSGEYAAARAALIDSGRALPQAVCGVPQSSSDTVQFC CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEE VTDRDGNACSMVNSIYMTFGSGVVVPSLGLALQNRGHNFVLRQDHPNCLAPYKRPYHTII EECCCCCHHHHHHHHHHHHCCCEEHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHC PCLTTHENGELHGVMGVMGGFMQPQGHVQILSALLDDGCNPQQALDRLRFCIQPDGAASV CEEEECCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCEE VALEEGMDAGLADSLKARGHDVRPVSGYARDLFGRGQIILRQPNGFWEAGSDGRADGLAL EEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE GF CC >Mature Secondary Structure MKSSLPVFEFASRRSPVYAPEVMVAASQPLAVSAGLGIAARGGSAADMAVAVAAVLAVVE CCCCCCHHHHHHCCCCCCCCCEEEECCCCEEEECCCCEEECCCCHHHHHHHHHHHHHHHH PCSTGLGGDAFALYYDSATQHVAALNGSGKSGGGHTPEAVFSAGYDAVPARHGLAVTVPG HHCCCCCCCEEEEEECCCHHEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCC ACAAWCELHRKYGRLDLAEVLAPAVRLARDGFAVGPVTARLWATEEALLRGSEGGKSLLV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCCCEEEE RGRAPRAGERIRNHALARLLKNIARKGAAALYEGAAAAALADAVQAAGGVLTADDMSRCR ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHH AQWQTPASTVYGGVRVHECPPNGQGLVALSALNILAALSDKIKGAPVSAERLHCMIESLR HHCCCCHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LGFADGAAYIADPDFSAVPADGLLSGEYAAARAALIDSGRALPQAVCGVPQSSSDTVQFC CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEE VTDRDGNACSMVNSIYMTFGSGVVVPSLGLALQNRGHNFVLRQDHPNCLAPYKRPYHTII EECCCCCHHHHHHHHHHHHCCCEEHHCCCHHHHCCCCEEEEECCCCCCCCCCCCCCHHHC PCLTTHENGELHGVMGVMGGFMQPQGHVQILSALLDDGCNPQQALDRLRFCIQPDGAASV CEEEECCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCCCEE VALEEGMDAGLADSLKARGHDVRPVSGYARDLFGRGQIILRQPNGFWEAGSDGRADGLAL EEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEE GF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]