Click here to switch to the map view.

The map label for this gene is 78356668

Identifier: 78356668

GI number: 78356668

Start: 1674332

End: 1674940

Strand: Direct

Name: 78356668

Synonym: Dde_1625

Alternate gene names: NA

Gene position: 1674332-1674940 (Clockwise)

Preceding gene: 78356667

Following gene: 78356670

Centisome position: 44.89

GC content: 57.14

Gene sequence:

>609_bases
ATGACATGCGGATTTTCTACTGAACTGCTGGAAAGGGTTGAAGCCTTTCACGGGCACCGCTGCCCGGGGCTTGCCATCGG
CGTGCGCGCCGCTGAACTTGCGCTGAACACTCTGGGCAGCGGGCAGGATGTTGATATGGTGTCCGTGGTGGAAACGGACA
TGTGCGGGGTGGATGCTATCCAGTTCATCACCGGTTGTACGCTGGGCAAGGGAAATTTGATCCATCGCGATTACGGCAAG
ATGGCTTTTTGTTTTTATGACAGAACTTCCGGCAGAGGTATACGCGCGGTGTTGCGTCCGGAGGCAAGAGGTGCCGGTGC
GGTGCGCATGGCGGAACTGATGAAGATGCGGGCGCAGGCGGAACTGACCTCTGAAATGCAGGCAGAGCTTTCCGCTCTGC
GCGATGCGCAGGAAAAACAGTTTTACACGTTACCGCTGGAAGAGATGTTCAGCGTTTCAGGGTGGGATATGGCTCCCAGA
CCGGCAGCCGTGCTTGCGAGTCTTGAATGCGCGGAATGCGGTGAGCATGTGATGGAGTCGCGTACCCGCCGTTTCGGGGG
GCGTACGCTCTGCATACCGTGTTTCATGGACGTCGAGCAGAAAATATGA

Upstream 100 bases:

>100_bases
GTCTGTGCTTCGGTCATTGAGGCTGTGTATGACCTGCCTGTGACAGTGCATAGCCTGAACGGGTACCCTACCGTGGTGCC
CAAAGCGTAAGGAGGCGGAG

Downstream 100 bases:

>100_bases
ACTGTTTTTTTATCGTGAAGCCTCTCCGGCAGTCGCCGGAGAGGCTTTTTTGTTGACGGTCTTGTACCATAAACATGATT
GAGAATTTCTATCAGCTAAT

Product: formylmethanofuran dehydrogenase subunit E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTCGFSTELLERVEAFHGHRCPGLAIGVRAAELALNTLGSGQDVDMVSVVETDMCGVDAIQFITGCTLGKGNLIHRDYGK
MAFCFYDRTSGRGIRAVLRPEARGAGAVRMAELMKMRAQAELTSEMQAELSALRDAQEKQFYTLPLEEMFSVSGWDMAPR
PAAVLASLECAECGEHVMESRTRRFGGRTLCIPCFMDVEQKI

Sequences:

>Translated_202_residues
MTCGFSTELLERVEAFHGHRCPGLAIGVRAAELALNTLGSGQDVDMVSVVETDMCGVDAIQFITGCTLGKGNLIHRDYGK
MAFCFYDRTSGRGIRAVLRPEARGAGAVRMAELMKMRAQAELTSEMQAELSALRDAQEKQFYTLPLEEMFSVSGWDMAPR
PAAVLASLECAECGEHVMESRTRRFGGRTLCIPCFMDVEQKI
>Mature_201_residues
TCGFSTELLERVEAFHGHRCPGLAIGVRAAELALNTLGSGQDVDMVSVVETDMCGVDAIQFITGCTLGKGNLIHRDYGKM
AFCFYDRTSGRGIRAVLRPEARGAGAVRMAELMKMRAQAELTSEMQAELSALRDAQEKQFYTLPLEEMFSVSGWDMAPRP
AAVLASLECAECGEHVMESRTRRFGGRTLCIPCFMDVEQKI

Specific function: Unknown

COG id: COG2191

COG function: function code C; Formylmethanofuran dehydrogenase subunit E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003814
- InterPro:   IPR018316
- InterPro:   IPR001378 [H]

Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 22182; Mature: 22051

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCGFSTELLERVEAFHGHRCPGLAIGVRAAELALNTLGSGQDVDMVSVVETDMCGVDAI
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH
QFITGCTLGKGNLIHRDYGKMAFCFYDRTSGRGIRAVLRPEARGAGAVRMAELMKMRAQA
HHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ELTSEMQAELSALRDAQEKQFYTLPLEEMFSVSGWDMAPRPAAVLASLECAECGEHVMES
HHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
RTRRFGGRTLCIPCFMDVEQKI
HHHHHCCCEEEEEECCCHHHCC
>Mature Secondary Structure 
TCGFSTELLERVEAFHGHRCPGLAIGVRAAELALNTLGSGQDVDMVSVVETDMCGVDAI
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHH
QFITGCTLGKGNLIHRDYGKMAFCFYDRTSGRGIRAVLRPEARGAGAVRMAELMKMRAQA
HHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ELTSEMQAELSALRDAQEKQFYTLPLEEMFSVSGWDMAPRPAAVLASLECAECGEHVMES
HHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHH
RTRRFGGRTLCIPCFMDVEQKI
HHHHHCCCEEEEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]