| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is feoB [C]
Identifier: 78356641
GI number: 78356641
Start: 1626874
End: 1628859
Strand: Reverse
Name: feoB [C]
Synonym: Dde_1598
Alternate gene names: 78356641
Gene position: 1628859-1626874 (Counterclockwise)
Preceding gene: 78356642
Following gene: 78356640
Centisome position: 43.67
GC content: 55.14
Gene sequence:
>1986_bases ATGTCAGCCGGTACTCACGTAGTTGCCCTTGCAGGTCAGCCCAATACGGGAAAATCGACCATTTTCAACGCCCTGACAGG AATGTATCAGGAAGTGGGAAACTGGGCCGGAAAAACGGTCGAAAAAAGAACCGGCCAGGCAAGCAGACAGGATGGCGGCT ACGCAGTGATCGATCTGCCCGGAACATACTCGCTGGATGCTCTTTCGCAGGAAGAACGTATCGCCGCTGATTTCATCAAA AACTATTCACCGGATGTCACTGTAGTTGTGGCCAGTGCGGTAAGCCCGCAAAGAACATTGCATTACGCGCTGGACGTCAT CATGCTGCAAAAGCCCATGGTTCTGGTGATGAACATGGCGGATATAGCCAGAGGCAATTCGCAGCATCTCGATGTTGAAA ATATCTCACAAAAAACCGGTGTACCGGTTCTGCTGCTCTCCGCCTCACGCAAGCAGGAACTCGGCCAGCTCAAGCAGGCC ATCGCACAGGCCCTCAAGGTTCCTCCTGTTCCCAAGCATATCGTGCCGGAGCTTGCTTCCGGACTTCCTGAAGGACTCAA ACGCAGCTTCACCGCTCTGGTACAGCAGGTCTGCGATGTTTCAGGATTTACCCGGATGCGGTCCGAAATACTTGTATGGA AAGCTATGGAAGGCGGGGAAGAAGAAAGGGACATCCTGCGCAGCACAGTGGGCGAAGATGCGGCGTGGGTACAAAATGAC CTGCTTGTGCAGCCTTATGTGCAGCAGGCACGCTACGGCTGGCTGGAAGAAGCTCTGGGGACAGGCAGCACCGCACCCGC ATCGTCAAAAACCGTTTCATATGACAGGTGGCTCCTGCATCCTTTTGCAGGTGCGCTCGCCATGGCAGGCATACTGCTGC TCTCCATCATCGTGGGATTCGGGCTGGGGTTCCCGCTGGCCCTCAAGATCGGGCAGACATCACAGGCGCTGGAAGCAATT GCCAGTGCAGGCATTCCGCAGGATATGATTGTCACAAAGGCACTGTTCACCGGCACATGGCGCGGGGTGGGCGCGGTGCT CAGCATGCTGCCGTTCATCATGGTTTTCTACGCGGTTTTTGCCGTGCTTGAAGACATCGGCTACATGGCAAGGGCGGCGT TCATCATGGACAGGGCCATGACCCGCATAGGGCTGAACGGCAAGGTATTCATTCCTCTGCTTTTTTCCATGCCGTGCAAC ATTACAGGAATCATGGGCTGCAGGACCATTGACGACCAGCGCATGCGCAAACTCGCTGTTCTGCTGGTACCGCTGGTGCC CTGCGCGGCCAAACTGATAGTGCTGGTTTCTCTGGCAAGCTGGCTCTTTCCGCCTCTTCAGGCTCTTGCCGTGGTATTTT CGCTGATAAGCCTCAACATGCTTATTCTGGGGGGCTGCAGCCTTGTTTTCGGACGCTTCATTCCCCGTCAGAGCAGCATC AGCGGTCTGCTGATGGAACTGCCCCACTATCACCGGCCCAACATCCGCACCATTTCGCGTCAGGTATTCAGAAACACACT GGCTTTTCTGAAAAAAGCGTCCACATTGATTGTCAGTTTCAGTGTAATAGTCTGGTTTGTTTCATATTACCCCGGCGGCA GCATAGAAACAAGCCTGATGGGCCAGCTGGGCAAATACCTTACACCGCTGGGGGCCCCCATGGGAGCGGACTGGCGGCTG ATAACCTCGCTTCTGGCTTCGTGCATCAGCAAAGAGGCGGTGCTGGCCACCATGGGCGTTATCTACAACACCCCCATCGG GGCGCTGCCCGCAACGCTCAAGGCCACAGTCAGCCCGCTTTCAGCCATTGCCTTCATGTGCGCGCAAAGTCTGTTCATTC CGTGCATTGCCACTCTGGGCATGATGTACAACGAGACAGGCTCTTACCGCACGCTTGCGGTAGTCATCAGCTATACCATT CTTCTTCCTTTCATCGTGGCCACTGCAGTTTTTCAGATAGGCAGCATGGTGGCAGCAACATACTGA
Upstream 100 bases:
>100_bases AAAGGCCCTCTGCTGGTCGAATGCAAGGGAACATATCTGGCGCTGTCGTATGATATCGCATCCCGCATCCGTCTTGAACC TGCTCAGGCGGTGTTGTGAC
Downstream 100 bases:
>100_bases CGTCCGATACTCATCTTCCCGCGGGCAAAACCAAACGCCGCCTGCGGGAAGATGCATAATCAGGCCCCGGGGCGGACAGC GCATAAAAGATGCTCCGTAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 661; Mature: 660
Protein sequence:
>661_residues MSAGTHVVALAGQPNTGKSTIFNALTGMYQEVGNWAGKTVEKRTGQASRQDGGYAVIDLPGTYSLDALSQEERIAADFIK NYSPDVTVVVASAVSPQRTLHYALDVIMLQKPMVLVMNMADIARGNSQHLDVENISQKTGVPVLLLSASRKQELGQLKQA IAQALKVPPVPKHIVPELASGLPEGLKRSFTALVQQVCDVSGFTRMRSEILVWKAMEGGEEERDILRSTVGEDAAWVQND LLVQPYVQQARYGWLEEALGTGSTAPASSKTVSYDRWLLHPFAGALAMAGILLLSIIVGFGLGFPLALKIGQTSQALEAI ASAGIPQDMIVTKALFTGTWRGVGAVLSMLPFIMVFYAVFAVLEDIGYMARAAFIMDRAMTRIGLNGKVFIPLLFSMPCN ITGIMGCRTIDDQRMRKLAVLLVPLVPCAAKLIVLVSLASWLFPPLQALAVVFSLISLNMLILGGCSLVFGRFIPRQSSI SGLLMELPHYHRPNIRTISRQVFRNTLAFLKKASTLIVSFSVIVWFVSYYPGGSIETSLMGQLGKYLTPLGAPMGADWRL ITSLLASCISKEAVLATMGVIYNTPIGALPATLKATVSPLSAIAFMCAQSLFIPCIATLGMMYNETGSYRTLAVVISYTI LLPFIVATAVFQIGSMVAATY
Sequences:
>Translated_661_residues MSAGTHVVALAGQPNTGKSTIFNALTGMYQEVGNWAGKTVEKRTGQASRQDGGYAVIDLPGTYSLDALSQEERIAADFIK NYSPDVTVVVASAVSPQRTLHYALDVIMLQKPMVLVMNMADIARGNSQHLDVENISQKTGVPVLLLSASRKQELGQLKQA IAQALKVPPVPKHIVPELASGLPEGLKRSFTALVQQVCDVSGFTRMRSEILVWKAMEGGEEERDILRSTVGEDAAWVQND LLVQPYVQQARYGWLEEALGTGSTAPASSKTVSYDRWLLHPFAGALAMAGILLLSIIVGFGLGFPLALKIGQTSQALEAI ASAGIPQDMIVTKALFTGTWRGVGAVLSMLPFIMVFYAVFAVLEDIGYMARAAFIMDRAMTRIGLNGKVFIPLLFSMPCN ITGIMGCRTIDDQRMRKLAVLLVPLVPCAAKLIVLVSLASWLFPPLQALAVVFSLISLNMLILGGCSLVFGRFIPRQSSI SGLLMELPHYHRPNIRTISRQVFRNTLAFLKKASTLIVSFSVIVWFVSYYPGGSIETSLMGQLGKYLTPLGAPMGADWRL ITSLLASCISKEAVLATMGVIYNTPIGALPATLKATVSPLSAIAFMCAQSLFIPCIATLGMMYNETGSYRTLAVVISYTI LLPFIVATAVFQIGSMVAATY >Mature_660_residues SAGTHVVALAGQPNTGKSTIFNALTGMYQEVGNWAGKTVEKRTGQASRQDGGYAVIDLPGTYSLDALSQEERIAADFIKN YSPDVTVVVASAVSPQRTLHYALDVIMLQKPMVLVMNMADIARGNSQHLDVENISQKTGVPVLLLSASRKQELGQLKQAI AQALKVPPVPKHIVPELASGLPEGLKRSFTALVQQVCDVSGFTRMRSEILVWKAMEGGEEERDILRSTVGEDAAWVQNDL LVQPYVQQARYGWLEEALGTGSTAPASSKTVSYDRWLLHPFAGALAMAGILLLSIIVGFGLGFPLALKIGQTSQALEAIA SAGIPQDMIVTKALFTGTWRGVGAVLSMLPFIMVFYAVFAVLEDIGYMARAAFIMDRAMTRIGLNGKVFIPLLFSMPCNI TGIMGCRTIDDQRMRKLAVLLVPLVPCAAKLIVLVSLASWLFPPLQALAVVFSLISLNMLILGGCSLVFGRFIPRQSSIS GLLMELPHYHRPNIRTISRQVFRNTLAFLKKASTLIVSFSVIVWFVSYYPGGSIETSLMGQLGKYLTPLGAPMGADWRLI TSLLASCISKEAVLATMGVIYNTPIGALPATLKATVSPLSAIAFMCAQSLFIPCIATLGMMYNETGSYRTLAVVISYTIL LPFIVATAVFQIGSMVAATY
Specific function: Probable GTP-driven transporter of Fe(2+) ion [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=612, Percent_Identity=30.0653594771242, Blast_Score=223, Evalue=4e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 71288; Mature: 71157
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGTHVVALAGQPNTGKSTIFNALTGMYQEVGNWAGKTVEKRTGQASRQDGGYAVIDLP CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECC GTYSLDALSQEERIAADFIKNYSPDVTVVVASAVSPQRTLHYALDVIMLQKPMVLVMNMA CCCCHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH DIARGNSQHLDVENISQKTGVPVLLLSASRKQELGQLKQAIAQALKVPPVPKHIVPELAS HHHCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GLPEGLKRSFTALVQQVCDVSGFTRMRSEILVWKAMEGGEEERDILRSTVGEDAAWVQND CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHC LLVQPYVQQARYGWLEEALGTGSTAPASSKTVSYDRWLLHPFAGALAMAGILLLSIIVGF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGFPLALKIGQTSQALEAIASAGIPQDMIVTKALFTGTWRGVGAVLSMLPFIMVFYAVF CCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AVLEDIGYMARAAFIMDRAMTRIGLNGKVFIPLLFSMPCNITGIMGCRTIDDQRMRKLAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEEECCCCCCCHHHHHHHHH LLVPLVPCAAKLIVLVSLASWLFPPLQALAVVFSLISLNMLILGGCSLVFGRFIPRQSSI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SGLLMELPHYHRPNIRTISRQVFRNTLAFLKKASTLIVSFSVIVWFVSYYPGGSIETSLM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GQLGKYLTPLGAPMGADWRLITSLLASCISKEAVLATMGVIYNTPIGALPATLKATVSPL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SAIAFMCAQSLFIPCIATLGMMYNETGSYRTLAVVISYTILLPFIVATAVFQIGSMVAAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Y C >Mature Secondary Structure SAGTHVVALAGQPNTGKSTIFNALTGMYQEVGNWAGKTVEKRTGQASRQDGGYAVIDLP CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEECC GTYSLDALSQEERIAADFIKNYSPDVTVVVASAVSPQRTLHYALDVIMLQKPMVLVMNMA CCCCHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHH DIARGNSQHLDVENISQKTGVPVLLLSASRKQELGQLKQAIAQALKVPPVPKHIVPELAS HHHCCCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GLPEGLKRSFTALVQQVCDVSGFTRMRSEILVWKAMEGGEEERDILRSTVGEDAAWVQND CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHCCCHHHHHHC LLVQPYVQQARYGWLEEALGTGSTAPASSKTVSYDRWLLHPFAGALAMAGILLLSIIVGF CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGFPLALKIGQTSQALEAIASAGIPQDMIVTKALFTGTWRGVGAVLSMLPFIMVFYAVF CCCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH AVLEDIGYMARAAFIMDRAMTRIGLNGKVFIPLLFSMPCNITGIMGCRTIDDQRMRKLAV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCEEECCCCCCCHHHHHHHHH LLVPLVPCAAKLIVLVSLASWLFPPLQALAVVFSLISLNMLILGGCSLVFGRFIPRQSSI HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SGLLMELPHYHRPNIRTISRQVFRNTLAFLKKASTLIVSFSVIVWFVSYYPGGSIETSLM HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GQLGKYLTPLGAPMGADWRLITSLLASCISKEAVLATMGVIYNTPIGALPATLKATVSPL HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH SAIAFMCAQSLFIPCIATLGMMYNETGSYRTLAVVISYTILLPFIVATAVFQIGSMVAAT HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]