Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

Click here to switch to the map view.

The map label for this gene is 78356602

Identifier: 78356602

GI number: 78356602

Start: 1578084

End: 1578569

Strand: Direct

Name: 78356602

Synonym: Dde_1559

Alternate gene names: NA

Gene position: 1578084-1578569 (Clockwise)

Preceding gene: 78356601

Following gene: 78356603

Centisome position: 42.31

GC content: 55.76

Gene sequence:

>486_bases
ATGCCCGCAAAATCAACCGCTGCGCTGCAGCCGCCGCAAGTATGGATTCTTCCGCCGTTGTTTTTTTATGCCTGCCTTGT
GGCTGGAGGCGTGCTTGAGTTTGTCTTTCCTACTTCACTGCCGTTAAGCGGCCGTTTTCTGCATGTGCCGGCGGGGCTTT
TTCTGGTGCTGGCAGGAGGCGCGTTCATGATGTGGGGGCACAACCTGTTTACCAGCCGAAAGGTGCAGGTACGCACCGAC
AGCCCTTCGCATATGCTGGTGGCTGAAGGGGCTTACCGTTACAGCCGTAACCCCATGTATACCGGCGGGGTGGCCATTAT
GGCCGGTATAGGCGTGATGATGGCAAGCCTGTGGCTGCTGGGTGCTGCGTTTATGCTGTTACTGTATCTGCATCTGCATG
TTGTCCCGCGGGAAGAAGCCTACCTCCGTGCCGCGTTTGGAAACAGATATGAAGAGTTTTGTCTCAGTGTCAGAAGGTGG
CTGTAA

Upstream 100 bases:

>100_bases
TTCGGGCGGCTTTTTTATGAGCGGGCGTTGCCTGATCGATATATTGACAATTTAATTGTCAATATGACATTTTTATTGTC
AATATGACAGGGAGGTGCTT

Downstream 100 bases:

>100_bases
TGAAGCCGCATACATGCGCCTGCGGCGCGGAGTTGCACGATCTTTTCCGGCAGGTTGTCAGACTGAATGCGGCGCTGGGT
ATTATTATGGACAGTGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTD
SPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRW
L

Sequences:

>Translated_161_residues
MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTD
SPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRW
L
>Mature_160_residues
PAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTDS
PSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL

Specific function: Unknown

COG id: COG2020

COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17911; Mature: 17779

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGG
CCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHHHHHCC
AFMMWGHNLFTSRKVQVRTDSPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLL
CCEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGG
CCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHHHHHCC
AFMMWGHNLFTSRKVQVRTDSPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLL
CCEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
GAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA