| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356602
Identifier: 78356602
GI number: 78356602
Start: 1578084
End: 1578569
Strand: Direct
Name: 78356602
Synonym: Dde_1559
Alternate gene names: NA
Gene position: 1578084-1578569 (Clockwise)
Preceding gene: 78356601
Following gene: 78356603
Centisome position: 42.31
GC content: 55.76
Gene sequence:
>486_bases ATGCCCGCAAAATCAACCGCTGCGCTGCAGCCGCCGCAAGTATGGATTCTTCCGCCGTTGTTTTTTTATGCCTGCCTTGT GGCTGGAGGCGTGCTTGAGTTTGTCTTTCCTACTTCACTGCCGTTAAGCGGCCGTTTTCTGCATGTGCCGGCGGGGCTTT TTCTGGTGCTGGCAGGAGGCGCGTTCATGATGTGGGGGCACAACCTGTTTACCAGCCGAAAGGTGCAGGTACGCACCGAC AGCCCTTCGCATATGCTGGTGGCTGAAGGGGCTTACCGTTACAGCCGTAACCCCATGTATACCGGCGGGGTGGCCATTAT GGCCGGTATAGGCGTGATGATGGCAAGCCTGTGGCTGCTGGGTGCTGCGTTTATGCTGTTACTGTATCTGCATCTGCATG TTGTCCCGCGGGAAGAAGCCTACCTCCGTGCCGCGTTTGGAAACAGATATGAAGAGTTTTGTCTCAGTGTCAGAAGGTGG CTGTAA
Upstream 100 bases:
>100_bases TTCGGGCGGCTTTTTTATGAGCGGGCGTTGCCTGATCGATATATTGACAATTTAATTGTCAATATGACATTTTTATTGTC AATATGACAGGGAGGTGCTT
Downstream 100 bases:
>100_bases TGAAGCCGCATACATGCGCCTGCGGCGCGGAGTTGCACGATCTTTTCCGGCAGGTTGTCAGACTGAATGCGGCGCTGGGT ATTATTATGGACAGTGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTD SPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRW L
Sequences:
>Translated_161_residues MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTD SPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRW L >Mature_160_residues PAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGGAFMMWGHNLFTSRKVQVRTDS PSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLLGAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17911; Mature: 17779
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGG CCCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHHHHHCC AFMMWGHNLFTSRKVQVRTDSPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLL CCEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure PAKSTAALQPPQVWILPPLFFYACLVAGGVLEFVFPTSLPLSGRFLHVPAGLFLVLAGG CCCCCCCCCCCCEEEECHHHHHHHHHHCCHHHHHCCCCCCCCCCEEECCHHHHHHHHCC AFMMWGHNLFTSRKVQVRTDSPSHMLVAEGAYRYSRNPMYTGGVAIMAGIGVMMASLWLL CCEEECCCCCCCCEEEEEECCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHH GAAFMLLLYLHLHVVPREEAYLRAAFGNRYEEFCLSVRRWL HHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA