Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356586

Identifier: 78356586

GI number: 78356586

Start: 1563033

End: 1563683

Strand: Direct

Name: 78356586

Synonym: Dde_1543

Alternate gene names: NA

Gene position: 1563033-1563683 (Clockwise)

Preceding gene: 78356585

Following gene: 78356587

Centisome position: 41.9

GC content: 54.53

Gene sequence:

>651_bases
GTGCTTGATATATCACAACTGCTTGAAGAGATTAAGGCGTCTCCTTATCAGGAGGAGACAATAGTGGCCCCCCACACGGG
GGTGGTGACCTTTGCTCCCATCAAGGAAGGCAAGCGTGTGCGCGGGCCTTCCGGTGTGTGGAAAGAAGTGAAGGGGACAC
TGCTTGCCACCATTGAACGGGAAAGGAACCCCAAACCCATTCATGCCACGGAAAAAGGCAAGGTGAAGGATATATTCCGC
CAGTACGAAGGAACCTTTGTCGAAGCCGGAACACCGCTTGTGAGCATCCGGCACTATCTGTCAAAGGAGGAAGTGCTGGG
GATCATTCTGCGTAAGGCGCTGCATCTGTTCAAGGCGCCGGAGCGGGCCAAATACTACTTCACGCCGGATGTGGACAAAA
AAGTCAAGGTGTCCGGTTCCAGATCTGTCACTGTGCAGAACGGCATGGAACTTTTCATCATGTCGCGTATGAAGCGCGAA
ACGCCGCTGCATTACGAAGGCCCCGAAGGTCTGATTTACGCGGTGTACTTTCAGCATAACGAAAACGTGGACGCCGGCCA
GCCGCTGATAGGCATCTGCCCGCCGGATCAGCTGGAAACCATAGAAGAGGTGGTCATGCGCGTGCAGACGGAGTGGGTGG
AAAAGGAGTGA

Upstream 100 bases:

>100_bases
TGCGCCAGGCACTGCTGACCATGGGCGGACGCAATCTTTATTACCGCTAGCCGTCAACCGGCCGCGGGGCCGAACGAAGC
AAGGAAACGGGTGAAAAACC

Downstream 100 bases:

>100_bases
CCGATGGGTAAAGTGCTTCAGGTACGGGTTATGGCCTATACGTTTGACCCCGATGATGTCAGGCGTACCTGGCCGCTGCT
TTACACGCAGGTATGGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR
QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE
TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE

Sequences:

>Translated_216_residues
MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR
QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE
TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE
>Mature_216_residues
MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR
QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE
TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24575; Mature: 24575

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIER
CCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHEEEEEC
ERNPKPIHATEKGKVKDIFRQYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAP
CCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCC
ERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRETPLHYEGPEGLIYAVYFQHN
CCCEEEECCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEC
ENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIER
CCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHEEEEEC
ERNPKPIHATEKGKVKDIFRQYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAP
CCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCC
ERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRETPLHYEGPEGLIYAVYFQHN
CCCEEEECCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEC
ENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA