| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356586
Identifier: 78356586
GI number: 78356586
Start: 1563033
End: 1563683
Strand: Direct
Name: 78356586
Synonym: Dde_1543
Alternate gene names: NA
Gene position: 1563033-1563683 (Clockwise)
Preceding gene: 78356585
Following gene: 78356587
Centisome position: 41.9
GC content: 54.53
Gene sequence:
>651_bases GTGCTTGATATATCACAACTGCTTGAAGAGATTAAGGCGTCTCCTTATCAGGAGGAGACAATAGTGGCCCCCCACACGGG GGTGGTGACCTTTGCTCCCATCAAGGAAGGCAAGCGTGTGCGCGGGCCTTCCGGTGTGTGGAAAGAAGTGAAGGGGACAC TGCTTGCCACCATTGAACGGGAAAGGAACCCCAAACCCATTCATGCCACGGAAAAAGGCAAGGTGAAGGATATATTCCGC CAGTACGAAGGAACCTTTGTCGAAGCCGGAACACCGCTTGTGAGCATCCGGCACTATCTGTCAAAGGAGGAAGTGCTGGG GATCATTCTGCGTAAGGCGCTGCATCTGTTCAAGGCGCCGGAGCGGGCCAAATACTACTTCACGCCGGATGTGGACAAAA AAGTCAAGGTGTCCGGTTCCAGATCTGTCACTGTGCAGAACGGCATGGAACTTTTCATCATGTCGCGTATGAAGCGCGAA ACGCCGCTGCATTACGAAGGCCCCGAAGGTCTGATTTACGCGGTGTACTTTCAGCATAACGAAAACGTGGACGCCGGCCA GCCGCTGATAGGCATCTGCCCGCCGGATCAGCTGGAAACCATAGAAGAGGTGGTCATGCGCGTGCAGACGGAGTGGGTGG AAAAGGAGTGA
Upstream 100 bases:
>100_bases TGCGCCAGGCACTGCTGACCATGGGCGGACGCAATCTTTATTACCGCTAGCCGTCAACCGGCCGCGGGGCCGAACGAAGC AAGGAAACGGGTGAAAAACC
Downstream 100 bases:
>100_bases CCGATGGGTAAAGTGCTTCAGGTACGGGTTATGGCCTATACGTTTGACCCCGATGATGTCAGGCGTACCTGGCCGCTGCT TTACACGCAGGTATGGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE
Sequences:
>Translated_216_residues MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE >Mature_216_residues MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIERERNPKPIHATEKGKVKDIFR QYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAPERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRE TPLHYEGPEGLIYAVYFQHNENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24575; Mature: 24575
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIER CCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHEEEEEC ERNPKPIHATEKGKVKDIFRQYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAP CCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCC ERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRETPLHYEGPEGLIYAVYFQHN CCCEEEECCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEC ENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDISQLLEEIKASPYQEETIVAPHTGVVTFAPIKEGKRVRGPSGVWKEVKGTLLATIER CCCHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHCCHHEEEEEC ERNPKPIHATEKGKVKDIFRQYEGTFVEAGTPLVSIRHYLSKEEVLGIILRKALHLFKAP CCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCC ERAKYYFTPDVDKKVKVSGSRSVTVQNGMELFIMSRMKRETPLHYEGPEGLIYAVYFQHN CCCEEEECCCCCCEEEECCCCEEEECCCHHHHHHHHHHHCCCCCEECCCCEEEEEEEEEC ENVDAGQPLIGICPPDQLETIEEVVMRVQTEWVEKE CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA