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The map label for this gene is yufP [H]

Identifier: 78356553

GI number: 78356553

Start: 1526313

End: 1527380

Strand: Direct

Name: yufP [H]

Synonym: Dde_1508

Alternate gene names: 78356553

Gene position: 1526313-1527380 (Clockwise)

Preceding gene: 78356552

Following gene: 78356554

Centisome position: 40.92

GC content: 57.4

Gene sequence:

>1068_bases
ATGATGGGTTACAGAGTCGTTAAACGACAGGAGCCCCTTAACTGGGGCTCCTTTTTCATTTTTCTGGTTGCCCTTGTTCT
TTCTCTGTCACTGAGCGGCGCCATGCTGGCCGTACAGGGAAAACCTTTTCTCAAGGGACTGTATCTGTTGTGGGACGGCG
GGTTCGGCCAGCTGTATGCGCTGGAAGATACGCTGCTCAAAACCATACCCATTTTTCTGTGCGCCTTGGGCGTTGCCGTC
TGCTTTCGCATGCAGATATGGAACATCGGCGCCGAGGGCCAGTTCGCGCTGGGAGCAGTGGGGGCCACATGGGCCGTGCT
GACTTTTCCTGCTGCTCCGGCGTGGGTGCTTATTCCGCTCATGCTGGTGTGCGGTGCCGTGGCCGGAGGCCTGTGGGCGC
TTGTGCCGGCACTGCTGCGGTTGCGGCTGGGTATGAATGAAATCATCACAACATTGATGTTTAACTATATCGGCATCCTG
CTGCTGCAATACATGGTTTACGGGCCGTGGAAAGACCCGGCCAGTTTCGGATTTCCCATGACCCCCATGTTTCCCGTGGC
CGCGGTTTTTGCCCCTGTTGTCGGCAGAATACACTGGGGCATAGTGTTATGCGCCGTGGTGGCCGTGGCGCTGTGGTTTT
TTCTGTATCGTACGCGGCTTGGGTTTGAGCTGCTGGCGGGCGGAGAAAACCCCAGAGCGGCGCGCTACGCACGTATGCCG
TACAACTTTCTGGTTGTTTTTGTGCTGGTGTTATGCGGTGCTCTTGCCGGCTGGGCAGGCGTTCTGGAAACATCCACCAC
ACTTGGCAGGCTGCAGTCCAACGTCATGGCCGGTTATGGATTTACGGCCATTGTTGTGGCGTGGCTTGCCCGGTTACGCA
TTCCGACCATCGCGGTGTTTTCCTTTCTGCTTGCAGGGTTGCGGGTAGGGGTGGAAAACCTGCAGCTGGAACTGCAGGTG
CCCGCCGCATTCGGCGGCATTATCGAAGGGCTTATTCTGCTGACAGTGCTGGCCGGGCAGTTTTTTGTCTGGTTTACGCT
GCAGCCCCGCAGCAAAGGGGAGGACTAG

Upstream 100 bases:

>100_bases
TGAAAAGGCCGGTGATGCCGCGCTGCTCGGCATGGACTGGTTTGTCGAAGGCGTGGTAGGCACCACCGAATAGACCCTGC
ATCGCTGGAGACATTGCCCG

Downstream 100 bases:

>100_bases
CCATGTATGCGGAACTTGTCATCCCCGTTCTGGCCGCCACCATTCAGGCCGGCACGCCTATACTGTTTGCCACGCTGGGC
GAAATGTTCACCGAAAGGGC

Product: branched-chain amino acid ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MMGYRVVKRQEPLNWGSFFIFLVALVLSLSLSGAMLAVQGKPFLKGLYLLWDGGFGQLYALEDTLLKTIPIFLCALGVAV
CFRMQIWNIGAEGQFALGAVGATWAVLTFPAAPAWVLIPLMLVCGAVAGGLWALVPALLRLRLGMNEIITTLMFNYIGIL
LLQYMVYGPWKDPASFGFPMTPMFPVAAVFAPVVGRIHWGIVLCAVVAVALWFFLYRTRLGFELLAGGENPRAARYARMP
YNFLVVFVLVLCGALAGWAGVLETSTTLGRLQSNVMAGYGFTAIVVAWLARLRIPTIAVFSFLLAGLRVGVENLQLELQV
PAAFGGIIEGLILLTVLAGQFFVWFTLQPRSKGED

Sequences:

>Translated_355_residues
MMGYRVVKRQEPLNWGSFFIFLVALVLSLSLSGAMLAVQGKPFLKGLYLLWDGGFGQLYALEDTLLKTIPIFLCALGVAV
CFRMQIWNIGAEGQFALGAVGATWAVLTFPAAPAWVLIPLMLVCGAVAGGLWALVPALLRLRLGMNEIITTLMFNYIGIL
LLQYMVYGPWKDPASFGFPMTPMFPVAAVFAPVVGRIHWGIVLCAVVAVALWFFLYRTRLGFELLAGGENPRAARYARMP
YNFLVVFVLVLCGALAGWAGVLETSTTLGRLQSNVMAGYGFTAIVVAWLARLRIPTIAVFSFLLAGLRVGVENLQLELQV
PAAFGGIIEGLILLTVLAGQFFVWFTLQPRSKGED
>Mature_355_residues
MMGYRVVKRQEPLNWGSFFIFLVALVLSLSLSGAMLAVQGKPFLKGLYLLWDGGFGQLYALEDTLLKTIPIFLCALGVAV
CFRMQIWNIGAEGQFALGAVGATWAVLTFPAAPAWVLIPLMLVCGAVAGGLWALVPALLRLRLGMNEIITTLMFNYIGIL
LLQYMVYGPWKDPASFGFPMTPMFPVAAVFAPVVGRIHWGIVLCAVVAVALWFFLYRTRLGFELLAGGENPRAARYARMP
YNFLVVFVLVLCGALAGWAGVLETSTTLGRLQSNVMAGYGFTAIVVAWLARLRIPTIAVFSFLLAGLRVGVENLQLELQV
PAAFGGIIEGLILLTVLAGQFFVWFTLQPRSKGED

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 38709; Mature: 38709

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGYRVVKRQEPLNWGSFFIFLVALVLSLSLSGAMLAVQGKPFLKGLYLLWDGGFGQLYA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHEEEEEECCCCCEEE
LEDTLLKTIPIFLCALGVAVCFRMQIWNIGAEGQFALGAVGATWAVLTFPAAPAWVLIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHH
MLVCGAVAGGLWALVPALLRLRLGMNEIITTLMFNYIGILLLQYMVYGPWKDPASFGFPM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPMFPVAAVFAPVVGRIHWGIVLCAVVAVALWFFLYRTRLGFELLAGGENPRAARYARMP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCHHHHHCCC
YNFLVVFVLVLCGALAGWAGVLETSTTLGRLQSNVMAGYGFTAIVVAWLARLRIPTIAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
SFLLAGLRVGVENLQLELQVPAAFGGIIEGLILLTVLAGQFFVWFTLQPRSKGED
HHHHHHHHHCHHHEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MMGYRVVKRQEPLNWGSFFIFLVALVLSLSLSGAMLAVQGKPFLKGLYLLWDGGFGQLYA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHEEEEEECCCCCEEE
LEDTLLKTIPIFLCALGVAVCFRMQIWNIGAEGQFALGAVGATWAVLTFPAAPAWVLIPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCHHHHHHHH
MLVCGAVAGGLWALVPALLRLRLGMNEIITTLMFNYIGILLLQYMVYGPWKDPASFGFPM
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPMFPVAAVFAPVVGRIHWGIVLCAVVAVALWFFLYRTRLGFELLAGGENPRAARYARMP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCCCCHHHHHCCC
YNFLVVFVLVLCGALAGWAGVLETSTTLGRLQSNVMAGYGFTAIVVAWLARLRIPTIAVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
SFLLAGLRVGVENLQLELQVPAAFGGIIEGLILLTVLAGQFFVWFTLQPRSKGED
HHHHHHHHHCHHHEEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]