| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356544
Identifier: 78356544
GI number: 78356544
Start: 1519198
End: 1519809
Strand: Direct
Name: 78356544
Synonym: Dde_1499
Alternate gene names: NA
Gene position: 1519198-1519809 (Clockwise)
Preceding gene: 78356540
Following gene: 78356546
Centisome position: 40.73
GC content: 59.8
Gene sequence:
>612_bases ATGGGAACGGCTTTCCATCAGGGAGCACTGGATAATTTCTGCGCGCTGTATGCGGTGGTCAATGCTTTTTGCCGCACGCA CGCGCTTACCGCGTTTCAGGCCAGACGCATGTTTCATGACACGCTCCTCAGGCTTGCACAGGACGACGAGGTTTTTACCG CGGCGGTTACCGCCGCCACTGACTACACCGGCATAGTGCATGATATGCTGGAATGGTACGGGGCCGGTCTTTTCCCGCTG CATGTGCAGAGCGCTTTTGCCGATGAGCCGGCCGGAGAAAGCGATTTCTGGAGCATGGCTGCAGACTGGCTTGCCGCGGG TGCCAGAAGAACGATGCTGCTGCGGTTCATGCGCTATGTGCCCGGACAGGATGCCCCTGTGGTACGCCACTGGACAGCCG CCGACCGTCTGCTGGGCGATTCGCTTTTTCTGCTTGATTCCAGCAGAGACTCCGGTGCGCTGCACGTGCTTTTGCGGCAT CAGGTAACCTGCTTTCGTGAACGTGTGAACGAGGAACGCTTTGTGCGGATTATTCCCTCGTCCTGCCTGCTGCTGCAGGG ACTGGATGCTCCGCCGCCTCGGGGGATGAGCATCAGTCGTCCGCGCCGCTGA
Upstream 100 bases:
>100_bases AACTTAGTGGCCCTTGTTGTAAAGCAAAATCCGGAACATACTGTGCCGCGTAGGGCGTCGCAGCGATGTCAGGCGGACAG AGTATAACAAGGCGGGCGTC
Downstream 100 bases:
>100_bases CATTTTCTTCCCAGCGGCGCTGTTCGTCTTCCGGCATGCCGAAGGAGTGCTGCGCCGCGGGAAATTCTCCCTGACGCACT TCATCACCATACTGCTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MGTAFHQGALDNFCALYAVVNAFCRTHALTAFQARRMFHDTLLRLAQDDEVFTAAVTAATDYTGIVHDMLEWYGAGLFPL HVQSAFADEPAGESDFWSMAADWLAAGARRTMLLRFMRYVPGQDAPVVRHWTAADRLLGDSLFLLDSSRDSGALHVLLRH QVTCFRERVNEERFVRIIPSSCLLLQGLDAPPPRGMSISRPRR
Sequences:
>Translated_203_residues MGTAFHQGALDNFCALYAVVNAFCRTHALTAFQARRMFHDTLLRLAQDDEVFTAAVTAATDYTGIVHDMLEWYGAGLFPL HVQSAFADEPAGESDFWSMAADWLAAGARRTMLLRFMRYVPGQDAPVVRHWTAADRLLGDSLFLLDSSRDSGALHVLLRH QVTCFRERVNEERFVRIIPSSCLLLQGLDAPPPRGMSISRPRR >Mature_202_residues GTAFHQGALDNFCALYAVVNAFCRTHALTAFQARRMFHDTLLRLAQDDEVFTAAVTAATDYTGIVHDMLEWYGAGLFPLH VQSAFADEPAGESDFWSMAADWLAAGARRTMLLRFMRYVPGQDAPVVRHWTAADRLLGDSLFLLDSSRDSGALHVLLRHQ VTCFRERVNEERFVRIIPSSCLLLQGLDAPPPRGMSISRPRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22755; Mature: 22624
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTAFHQGALDNFCALYAVVNAFCRTHALTAFQARRMFHDTLLRLAQDDEVFTAAVTAAT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DYTGIVHDMLEWYGAGLFPLHVQSAFADEPAGESDFWSMAADWLAAGARRTMLLRFMRYV HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PGQDAPVVRHWTAADRLLGDSLFLLDSSRDSGALHVLLRHQVTCFRERVNEERFVRIIPS CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHEEEECCC SCLLLQGLDAPPPRGMSISRPRR HHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTAFHQGALDNFCALYAVVNAFCRTHALTAFQARRMFHDTLLRLAQDDEVFTAAVTAAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH DYTGIVHDMLEWYGAGLFPLHVQSAFADEPAGESDFWSMAADWLAAGARRTMLLRFMRYV HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC PGQDAPVVRHWTAADRLLGDSLFLLDSSRDSGALHVLLRHQVTCFRERVNEERFVRIIPS CCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCHHHEEEECCC SCLLLQGLDAPPPRGMSISRPRR HHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA