| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356511
Identifier: 78356511
GI number: 78356511
Start: 1487194
End: 1487844
Strand: Reverse
Name: 78356511
Synonym: Dde_1466
Alternate gene names: NA
Gene position: 1487844-1487194 (Counterclockwise)
Preceding gene: 78356512
Following gene: 78356510
Centisome position: 39.89
GC content: 56.84
Gene sequence:
>651_bases ATGCGCAAACTCTGCATAAAAATCCTGCTGGTCACGGCGGCGGCCGCGCTGCTGCTTACCGGCTGTTACAGCCCTGTCCA AGGTCCCATGCCGTTGCCCGATATCAACATCGGTGTGGCGGGCTTTACCCAGCCCACCACCACGGCAGCGCTGCTGGCCG GTTACATTCCTGAAAATCAGCAGGAGGTGGACAACCAGACCCTGCGCGGTCTTGATGAAGACTTTGCCGCCATTCTTGCC GGTGCCACCGCACGCAAGTATGTTTCCAGTGAACAGGGAAGGCAATGTCAGGAAATAGTTTCCGCCGCACAGCAGGGCGA AAAAAGCATCAGCGCTTTTGAACACTGGCTGCGCGTGGGCCGCTGCATGGAGGTTGACTACCTGCTGGTGCCGCATCTCA TCGACTGGCACCAGCGCAAAGGCGAAAACATGACGGCAGCCAGCCCCGCAAGCGTCACCCTTGACCTCTTTCTGATGGAC GTGCAGGGGCAGTCCCTTGTTTCGCGTTACCATTTTGAAGAAACCCAGCAGACACTTGCTGACAATCTGCTGGAGTTCAG CAAATTCGTCGAACGCAAAGGCAAGTGGATCACAGCAGAAGATCTGGCCCGCGAAGGACTGTATCAGGGAATCAAGGAGC TTGGTCTGTGA
Upstream 100 bases:
>100_bases ATCTGTTAGAATCCGCGTTCAAAGGTCTGGGGCTTGCTCTGCGCCGGGCCGCGGCTTGTGAACGCGAAGCACTGCTCAGC ACCAAGGGGAGTCTCGACTG
Downstream 100 bases:
>100_bases TCATCTTTCCTGCTGTGGACATAAAGGGCGGGCAGGCGGTTCGCCTGCGGCAGGGCAAGGCCGATCAGGAAACGGTTTTT TCCGGCGATCCTGTGGCCAT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MRKLCIKILLVTAAAALLLTGCYSPVQGPMPLPDINIGVAGFTQPTTTAALLAGYIPENQQEVDNQTLRGLDEDFAAILA GATARKYVSSEQGRQCQEIVSAAQQGEKSISAFEHWLRVGRCMEVDYLLVPHLIDWHQRKGENMTAASPASVTLDLFLMD VQGQSLVSRYHFEETQQTLADNLLEFSKFVERKGKWITAEDLAREGLYQGIKELGL
Sequences:
>Translated_216_residues MRKLCIKILLVTAAAALLLTGCYSPVQGPMPLPDINIGVAGFTQPTTTAALLAGYIPENQQEVDNQTLRGLDEDFAAILA GATARKYVSSEQGRQCQEIVSAAQQGEKSISAFEHWLRVGRCMEVDYLLVPHLIDWHQRKGENMTAASPASVTLDLFLMD VQGQSLVSRYHFEETQQTLADNLLEFSKFVERKGKWITAEDLAREGLYQGIKELGL >Mature_216_residues MRKLCIKILLVTAAAALLLTGCYSPVQGPMPLPDINIGVAGFTQPTTTAALLAGYIPENQQEVDNQTLRGLDEDFAAILA GATARKYVSSEQGRQCQEIVSAAQQGEKSISAFEHWLRVGRCMEVDYLLVPHLIDWHQRKGENMTAASPASVTLDLFLMD VQGQSLVSRYHFEETQQTLADNLLEFSKFVERKGKWITAEDLAREGLYQGIKELGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23871; Mature: 23871
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLCIKILLVTAAAALLLTGCYSPVQGPMPLPDINIGVAGFTQPTTTAALLAGYIPENQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCH QEVDNQTLRGLDEDFAAILAGATARKYVSSEQGRQCQEIVSAAQQGEKSISAFEHWLRVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH RCMEVDYLLVPHLIDWHQRKGENMTAASPASVTLDLFLMDVQGQSLVSRYHFEETQQTLA HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHEEECCCCHHHHHHHHHHHHHHHHH DNLLEFSKFVERKGKWITAEDLAREGLYQGIKELGL HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKLCIKILLVTAAAALLLTGCYSPVQGPMPLPDINIGVAGFTQPTTTAALLAGYIPENQ CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCH QEVDNQTLRGLDEDFAAILAGATARKYVSSEQGRQCQEIVSAAQQGEKSISAFEHWLRVG HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHH RCMEVDYLLVPHLIDWHQRKGENMTAASPASVTLDLFLMDVQGQSLVSRYHFEETQQTLA HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHEEECCCCHHHHHHHHHHHHHHHHH DNLLEFSKFVERKGKWITAEDLAREGLYQGIKELGL HHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA