| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is glnM [H]
Identifier: 78356431
GI number: 78356431
Start: 1404363
End: 1405376
Strand: Direct
Name: glnM [H]
Synonym: Dde_1386
Alternate gene names: 78356431
Gene position: 1404363-1405376 (Clockwise)
Preceding gene: 78356430
Following gene: 78356432
Centisome position: 37.65
GC content: 57.99
Gene sequence:
>1014_bases ATGACGGCATATAGAGGGCTGGATGCGCCCAGAGGTCCGGGATACTTTCTCTTCTGGAAGGCGGCTTTTGTGGCGATGCT GCTTGTCACTGTCGGTTTTCTGTGGGCTGCGTCCAATTCTGTGGAGTATGTATGGCGGTGGAACCGCATTCCCCAGTATT TCTGGGTGCAGAAACATGTGGACGTGCGCGCTGAGCAGCAGGGAACTCTTGTTGAGACGCTGACAAAAGACGGCGCACGG TTTGTGGTGCTGCAGGAAGACGACGGTACCCGTGTGCAGCAGAAGCTGGAACCGGGTATGTCTCTTACTCCGGCGCAGGG GGATTACGTTTATCTGGGCGATGTGCTGGGCACATACAGGGTCAGCGAGCCGGGAGTGCTGCTGCAGGGGCTGTGGGTCA CGCTGGAGGTCAGCCTCATTTCCATTGTGTTCGGCATCACCTTCGGTGTGCTGACCGGCCTTGCCCGCATTTCCGAAAAC CCCGCGCTTAAATGGGGGGCCATCACCTACATCGAGCTGATCCGCGGTTCCCCCCTGCTGGTGCAGATTTTTCTGTGGTA TTTTGTCGCCGGTACGCTGGTGAACAATCTGCTTATGCAGGCCGGTCTGGGGCAGGTGCCGCCCATGTGGTTCGGTGTGC TGGCGCTGTCCGTGTTTACTGGTGCCTATGTGGCCGAAATTGTCCGTGCCGGTATACAGTCTGTGCACCGCGGGCAGATG GAAGCAGCCCGGTCGCTGGGTCTCAATTACAGTCAGGCCATGCGCAAGGTCATTCTGCCGCAGGCCTTCCGCCGCATCAT GCCGCCGCTGGCAGGGCAGTTCATCAGTCTGGTCAAAGACTCTTCTCTGCTGGGCGTCATCGCCATCCGCGAACTGACCA AGGCAACACGTGAAGTTGTCAGCTCTTCGCTGCAGCCTTTCGAGCTGTGGATTCTGTGCGCGGTGCTGTACCTGCTGCTT ACCTTCACGCTTTCGCTGTTTGTCTCTTATCTGGAAAACAAGGCCGTACGATGA
Upstream 100 bases:
>100_bases CTGGTTTCCGGGGGGGCGGCGTGCCGCGTTGTCACCCCCGCAGCCGGGAACCTCTGCGCCGCCCGTTGGCGGCGACATCG TTTGTGAGGTTTAGCATACA
Downstream 100 bases:
>100_bases TCAAGGCAAAGAACCTGAATAAAATATTCTACACCCCCGAGCCGCTGCATGCGCTCAGCGATGTATCGCTGGACGTTGCC GCGGGCGAGGTCGTGGTGGT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTAYRGLDAPRGPGYFLFWKAAFVAMLLVTVGFLWAASNSVEYVWRWNRIPQYFWVQKHVDVRAEQQGTLVETLTKDGAR FVVLQEDDGTRVQQKLEPGMSLTPAQGDYVYLGDVLGTYRVSEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARISEN PALKWGAITYIELIRGSPLLVQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQM EAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVVSSSLQPFELWILCAVLYLLL TFTLSLFVSYLENKAVR
Sequences:
>Translated_337_residues MTAYRGLDAPRGPGYFLFWKAAFVAMLLVTVGFLWAASNSVEYVWRWNRIPQYFWVQKHVDVRAEQQGTLVETLTKDGAR FVVLQEDDGTRVQQKLEPGMSLTPAQGDYVYLGDVLGTYRVSEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARISEN PALKWGAITYIELIRGSPLLVQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQM EAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVVSSSLQPFELWILCAVLYLLL TFTLSLFVSYLENKAVR >Mature_336_residues TAYRGLDAPRGPGYFLFWKAAFVAMLLVTVGFLWAASNSVEYVWRWNRIPQYFWVQKHVDVRAEQQGTLVETLTKDGARF VVLQEDDGTRVQQKLEPGMSLTPAQGDYVYLGDVLGTYRVSEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARISENP ALKWGAITYIELIRGSPLLVQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQME AARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVVSSSLQPFELWILCAVLYLLLT FTLSLFVSYLENKAVR
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=35.8851674641148, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1788226, Length=211, Percent_Identity=36.9668246445498, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=33.9622641509434, Blast_Score=121, Evalue=7e-29, Organism=Escherichia coli, GI1788646, Length=212, Percent_Identity=29.7169811320755, Blast_Score=108, Evalue=5e-25, Organism=Escherichia coli, GI1786874, Length=214, Percent_Identity=31.7757009345794, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1788645, Length=211, Percent_Identity=30.8056872037915, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI48994930, Length=207, Percent_Identity=34.7826086956522, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87082239, Length=211, Percent_Identity=30.8056872037915, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787087, Length=220, Percent_Identity=23.6363636363636, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787086, Length=220, Percent_Identity=24.0909090909091, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 37547; Mature: 37415
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYRGLDAPRGPGYFLFWKAAFVAMLLVTVGFLWAASNSVEYVWRWNRIPQYFWVQKHV CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHHH DVRAEQQGTLVETLTKDGARFVVLQEDDGTRVQQKLEPGMSLTPAQGDYVYLGDVLGTYR CCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEECCHHHCCC VSEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARISENPALKWGAITYIELIRGSPLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH VQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVV HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SSSLQPFELWILCAVLYLLLTFTLSLFVSYLENKAVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAYRGLDAPRGPGYFLFWKAAFVAMLLVTVGFLWAASNSVEYVWRWNRIPQYFWVQKHV CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCHHHHHHHHH DVRAEQQGTLVETLTKDGARFVVLQEDDGTRVQQKLEPGMSLTPAQGDYVYLGDVLGTYR CCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEECCHHHCCC VSEPGVLLQGLWVTLEVSLISIVFGITFGVLTGLARISENPALKWGAITYIELIRGSPLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHH VQIFLWYFVAGTLVNNLLMQAGLGQVPPMWFGVLALSVFTGAYVAEIVRAGIQSVHRGQM HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAARSLGLNYSQAMRKVILPQAFRRIMPPLAGQFISLVKDSSLLGVIAIRELTKATREVV HHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SSSLQPFELWILCAVLYLLLTFTLSLFVSYLENKAVR HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]