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The map label for this gene is hxlR [H]

Identifier: 78356399

GI number: 78356399

Start: 1369597

End: 1370064

Strand: Reverse

Name: hxlR [H]

Synonym: Dde_1352

Alternate gene names: 78356399

Gene position: 1370064-1369597 (Counterclockwise)

Preceding gene: 78356403

Following gene: 78356389

Centisome position: 36.73

GC content: 54.06

Gene sequence:

>468_bases
ATGCAGGCTTTCAAGCGCCCTGCAGTCTTGCGCGAAACCTTTTTTGCCGGTAGTGGAAAAAAAACGGAGGACGATATGAG
CGGGTGCGGACTTAAACACTGTGCAGGCAGAACCTATTACTGCTCCGTAGAGCTGACCATCCAGCTGATCGGGGGCAAAT
GGAAACCTATCATTCTGTATCATCTGGGCACGCGGGGCACGCACAGATTCGGCGAACTGCGGCGCACCATTCCCAATATC
ACGCAGAAAATGCTTACCCAGCAACTGCGCGAACTGGAAAAAGACGGAATAATCGAACGTAAAGTCTATCCGGAAGTGCC
TCCCAAGGTGGAGTATTCACTTTCCACAACGGGGCACAGCCTGATGCCCATTCTCAAGCAGCTGTGTCAATGGGGCAAGG
ATTACGAAAAGCATTTCGGCGCGGACAGTCCCGCCGCAGAGCAAAACGGCAGCTCCAGCGCGGCCTGA

Upstream 100 bases:

>100_bases
AAAGCAGACTACAGCAACCGGCTGCCGCTGTATCGCACACATATGCACAGATACTAACACAACACAGGTCTTTTGTGCAG
GTACATACCCTCAGGGAACC

Downstream 100 bases:

>100_bases
CCGGCGCGGCAGCACCGGCACAACCTGAACGGCGCGGCATGACGGCAATAATGGCAGGTTCAGACGGCTTCCGCCGGTTC
TCTGCCGTTCAGCAACAGTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MQAFKRPAVLRETFFAGSGKKTEDDMSGCGLKHCAGRTYYCSVELTIQLIGGKWKPIILYHLGTRGTHRFGELRRTIPNI
TQKMLTQQLRELEKDGIIERKVYPEVPPKVEYSLSTTGHSLMPILKQLCQWGKDYEKHFGADSPAAEQNGSSSAA

Sequences:

>Translated_155_residues
MQAFKRPAVLRETFFAGSGKKTEDDMSGCGLKHCAGRTYYCSVELTIQLIGGKWKPIILYHLGTRGTHRFGELRRTIPNI
TQKMLTQQLRELEKDGIIERKVYPEVPPKVEYSLSTTGHSLMPILKQLCQWGKDYEKHFGADSPAAEQNGSSSAA
>Mature_155_residues
MQAFKRPAVLRETFFAGSGKKTEDDMSGCGLKHCAGRTYYCSVELTIQLIGGKWKPIILYHLGTRGTHRFGELRRTIPNI
TQKMLTQQLRELEKDGIIERKVYPEVPPKVEYSLSTTGHSLMPILKQLCQWGKDYEKHFGADSPAAEQNGSSSAA

Specific function: Positive regulator of hxlAB expression [H]

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=91, Percent_Identity=40.6593406593407, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17403; Mature: 17403

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAFKRPAVLRETFFAGSGKKTEDDMSGCGLKHCAGRTYYCSVELTIQLIGGKWKPIILY
CCCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCEEEEEEEEEEEEECCCCCEEEEE
HLGTRGTHRFGELRRTIPNITQKMLTQQLRELEKDGIIERKVYPEVPPKVEYSLSTTGHS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCH
LMPILKQLCQWGKDYEKHFGADSPAAEQNGSSSAA
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQAFKRPAVLRETFFAGSGKKTEDDMSGCGLKHCAGRTYYCSVELTIQLIGGKWKPIILY
CCCCCCHHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCEEEEEEEEEEEEECCCCCEEEEE
HLGTRGTHRFGELRRTIPNITQKMLTQQLRELEKDGIIERKVYPEVPPKVEYSLSTTGHS
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCH
LMPILKQLCQWGKDYEKHFGADSPAAEQNGSSSAA
HHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377; 1715856 [H]