| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356392
Identifier: 78356392
GI number: 78356392
Start: 1362633
End: 1363169
Strand: Direct
Name: 78356392
Synonym: Dde_1345
Alternate gene names: NA
Gene position: 1362633-1363169 (Clockwise)
Preceding gene: 78356391
Following gene: 78356393
Centisome position: 36.53
GC content: 56.24
Gene sequence:
>537_bases ATGAGTACATCCGGACTGACGGCTGGTGACAACATTACCACCAGCTGCACCAGATGCAATGACGTTACCGGTCACGTGAT AGTGGCCATGGTAGGCAATGAGGTAGTGAAGGTTCAGTGTAAGGCCTGCGGCAGCGAGCATAAATACCGCCCGCCCAAGC AGCCCAAATCGCGGCCTCAGGCTCCTGCCGTGAAAAAAGTACGTGCAGGTTCCGCACGGGAAACTGCTACCACCACCGGC GCATCCGGACGCACCGTTTCGGCTTCTCGTTCCGAAGCTGCCCGCAAAGCCGCAGACACCCGCGCAGCCGCCCGTGCCGC CCGTGAAGCAGCACAGACCGCTGAAGTATGGCTGAAAGCCATTGCCGGTTCAGAAGACCGCGACGCAACCCCTTACAGCA TGAAAAGCACATACGAAGTGGGGCAGATTATTTCTCACCCCAATTTCGGAGTGGGTAAAGTGCAGCAGCTTGTAAAACCT GATAAAGTGGAAATTCTTTTCAGGCAGGGCATCAAGCTTTTGCGCTGCACCATGTGA
Upstream 100 bases:
>100_bases CACAGGTTCGCCCTGTGGCTCCTTTTTTGCCGGCTGTCCGAGCCGGACTATGATTCGTTCGTCTACGGGTGTTTACCCGT CTGAAACACAAGGGGATTCC
Downstream 100 bases:
>100_bases CGACGGCTGTACGCCGCGTTGAAACGTCCGGCTGGTTCCGGACGTTTTTTTTATGCTCTTCTGCCACCCCGTTGCCACCC GTTGCCGCTCCTGCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSTSGLTAGDNITTSCTRCNDVTGHVIVAMVGNEVVKVQCKACGSEHKYRPPKQPKSRPQAPAVKKVRAGSARETATTTG ASGRTVSASRSEAARKAADTRAAARAAREAAQTAEVWLKAIAGSEDRDATPYSMKSTYEVGQIISHPNFGVGKVQQLVKP DKVEILFRQGIKLLRCTM
Sequences:
>Translated_178_residues MSTSGLTAGDNITTSCTRCNDVTGHVIVAMVGNEVVKVQCKACGSEHKYRPPKQPKSRPQAPAVKKVRAGSARETATTTG ASGRTVSASRSEAARKAADTRAAARAAREAAQTAEVWLKAIAGSEDRDATPYSMKSTYEVGQIISHPNFGVGKVQQLVKP DKVEILFRQGIKLLRCTM >Mature_177_residues STSGLTAGDNITTSCTRCNDVTGHVIVAMVGNEVVKVQCKACGSEHKYRPPKQPKSRPQAPAVKKVRAGSARETATTTGA SGRTVSASRSEAARKAADTRAAARAAREAAQTAEVWLKAIAGSEDRDATPYSMKSTYEVGQIISHPNFGVGKVQQLVKPD KVEILFRQGIKLLRCTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18945; Mature: 18814
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSGLTAGDNITTSCTRCNDVTGHVIVAMVGNEVVKVQCKACGSEHKYRPPKQPKSRPQ CCCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCEEEEEEHHHCCCCCCCCCCCCCCCCCC APAVKKVRAGSARETATTTGASGRTVSASRSEAARKAADTRAAARAAREAAQTAEVWLKA CCHHHHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGSEDRDATPYSMKSTYEVGQIISHPNFGVGKVQQLVKPDKVEILFRQGIKLLRCTM HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHCCC >Mature Secondary Structure STSGLTAGDNITTSCTRCNDVTGHVIVAMVGNEVVKVQCKACGSEHKYRPPKQPKSRPQ CCCCCCCCCCCCCCHHCCCCCCCEEEEEEECCEEEEEEHHHCCCCCCCCCCCCCCCCCC APAVKKVRAGSARETATTTGASGRTVSASRSEAARKAADTRAAARAAREAAQTAEVWLKA CCHHHHHHCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGSEDRDATPYSMKSTYEVGQIISHPNFGVGKVQQLVKPDKVEILFRQGIKLLRCTM HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA