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The map label for this gene is ngr [H]

Identifier: 78356367

GI number: 78356367

Start: 1339453

End: 1339950

Strand: Direct

Name: ngr [H]

Synonym: Dde_1320

Alternate gene names: 78356367

Gene position: 1339453-1339950 (Clockwise)

Preceding gene: 78356366

Following gene: 78356368

Centisome position: 35.91

GC content: 53.21

Gene sequence:

>498_bases
ATGTCCAAGACCATGGAAAATCTGATGGCTGCTTTTGCCGGTGAATCTCAGGCCAACCGCAAGTACCTTGCCTTTGCCAA
GCAGGCAGAAAAGGAAGGCCACCATCAGGTTGCCAGACTGTTCCGCGCTGCCGCCGATGCCGAGACCATTCATGCTCACG
GTCATCTGCGCAATGCCGGTAAAATAGGCACCACAGCCGAAAACCTGAAGGCCGCCATTGAAGGCGAGACCTATGAATTT
GAAAAGATGTACCCCGTGATGATTGAAGAAGCCGAAGCCGAGGGCGAAAAGGTTGCAGCACGGTATTTCGGGTTTGCCAA
CAAGGCGGAAGAAGTGCACGCCAATCTGTACAAGAAGATGCTTGCAGCGCTGGAAAGCCCCGAAGAAGTTGACTACTACA
ACTGTTCCGTGTGCGGATACACCCACGAAGGTCCTTTTGACGGCGATAAGTGCCCTATCTGCGGCGCCGCCTCCAAGGCT
TTCTACAAGGTAGATTAA

Upstream 100 bases:

>100_bases
TACAAAGAGAAAAAAGTTTGTTTAATAGGAATCGTTACTGATTGAGAGCGGAGTGCTTCCGCAGAATATAACTGAAAACA
AAACATACAGGAGCATTGAA

Downstream 100 bases:

>100_bases
TTTACGGGACAGGGTTTTTGCCCTGCCTGAGTTGCCTGCGGGCCGGAAATATATTTCCGGCCCGTTTTTTTTGTGCCGGA
CGGTGTGCTGTGCGGCTTCC

Product: rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSKTMENLMAAFAGESQANRKYLAFAKQAEKEGHHQVARLFRAAADAETIHAHGHLRNAGKIGTTAENLKAAIEGETYEF
EKMYPVMIEEAEAEGEKVAARYFGFANKAEEVHANLYKKMLAALESPEEVDYYNCSVCGYTHEGPFDGDKCPICGAASKA
FYKVD

Sequences:

>Translated_165_residues
MSKTMENLMAAFAGESQANRKYLAFAKQAEKEGHHQVARLFRAAADAETIHAHGHLRNAGKIGTTAENLKAAIEGETYEF
EKMYPVMIEEAEAEGEKVAARYFGFANKAEEVHANLYKKMLAALESPEEVDYYNCSVCGYTHEGPFDGDKCPICGAASKA
FYKVD
>Mature_164_residues
SKTMENLMAAFAGESQANRKYLAFAKQAEKEGHHQVARLFRAAADAETIHAHGHLRNAGKIGTTAENLKAAIEGETYEFE
KMYPVMIEEAEAEGEKVAARYFGFANKAEEVHANLYKKMLAALESPEEVDYYNCSVCGYTHEGPFDGDKCPICGAASKAF
YKVD

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 18211; Mature: 18079

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTMENLMAAFAGESQANRKYLAFAKQAEKEGHHQVARLFRAAADAETIHAHGHLRNAG
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHEECCCCCCCCC
KIGTTAENLKAAIEGETYEFEKMYPVMIEEAEAEGEKVAARYFGFANKAEEVHANLYKKM
CCCCCHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
LAALESPEEVDYYNCSVCGYTHEGPFDGDKCPICGAASKAFYKVD
HHHHCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SKTMENLMAAFAGESQANRKYLAFAKQAEKEGHHQVARLFRAAADAETIHAHGHLRNAG
CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHEECCCCCCCCC
KIGTTAENLKAAIEGETYEFEKMYPVMIEEAEAEGEKVAARYFGFANKAEEVHANLYKKM
CCCCCHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
LAALESPEEVDYYNCSVCGYTHEGPFDGDKCPICGAASKAFYKVD
HHHHCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]