| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356265
Identifier: 78356265
GI number: 78356265
Start: 1245651
End: 1247294
Strand: Reverse
Name: 78356265
Synonym: Dde_1218
Alternate gene names: NA
Gene position: 1247294-1245651 (Counterclockwise)
Preceding gene: 78356267
Following gene: 78356246
Centisome position: 33.44
GC content: 56.39
Gene sequence:
>1644_bases ATGAATACCCCCGTGAAGAATAATGACGTGCTTGGCACCACTAACCGTGGCAATATTGTCGAATCCGGACTGTGCAGCCT GTGCCGCGCAGACTGTATGGGTAAATGCGAAACGTGGCTTTCATGCCTTAAAGGTCGCGACACCCTGTACCCGCGCGATT TCGGGTTGGTTACCGCCGGCAGCGGCAACACCACACATGTGGGCGTTTCATACAATTCTCTGCGCATTCAGGGCTACAAC TACGGTGCCCACGGCATGGGTGAAAACGGCAGCAAAGCTCAGTCCGGCGATGCGCTTTTCACCGATGCTTCGCTGGAAAC CAGCTTTGGCGCCGACGAAAAGACCAAATGCCGTTTCCCGCTGATGACCGGCGCTCTGGGTTCCACCTTTATTGCCGCGA AATACTGGGACTCTTTTGCCGTGGGCTGCGCACTGTGCGGCATTCCCATTGTGGTCGGTGAAAACGTGGTGGGCGTGGAC CGCAAATCTTCACTGGAAAACGGCCGCATAACCAGTGCGCCGGAACTTGAGCGCCGCATCAACACCTATCTGCGCTACTA CGACGGCTACGGCGCCATCATCGTTCAGATGAACGTGGAAGATACCCGTAACGGCGTGGCCGAATACATCGCCGAAAAAT ACGGCGACAAAGTCATTCTGGAGCTGAAGTGGGGACAGGGAGCCAAAGACATCGGCGGTGAAATCATCGTTGAAAGCCTT GATTACGCTCTGTTCCTGCAGGAGCGCGGTTACCTTGTGGACCCCGACCCCTCCCGTGCGGAAGTTCAGGAATCTTTCAA GTCCGGCGCCATCAAGGGTTTTGCCCGTCACAGCCGTCTGGGCTACACCAATCTCGGCACGTGGGAGCAGGTTCGTGAAA ACTTCATGAACTCCGTTGACTACCTGCGCAAGCTCGGATTCAAACGTATTTCTCTTAAAACCGGTTCGTACGGCATGCAG GCTCTGGCCATGTCCATCAAGCTTGCCACCGAAGCCCGTCTCGACCTGCTGACCATCGACGGTTCCGGCGGCGGTACCGG CATGAGCCCCTGGGACATGATGGAAACCTGGGGTGTCCCCTCCATCCTGCTGCATGCAAAAGCCTATGAATATGCTTCGA TGCTGGCAGCCAAGGGTGAACGTGTTGTAGACATGTCGTTTGCCGGTGGTTTTGCCAAATCCAGCCAGATTTTCAAGGCG CTGGCACTGGGCGCACCGTATACCAAACTTATCTGCATGGGCCGCGCCATGATGATTCCCGGCTTCCTCGGCTCCAACAT CGAAGGCGTACTGCGCCCCGAACGCCGTGAAGCCGTATGCGGCAACTGGGACAAACTGCCCCGCACGGTGACGGACTTCG GCACTACCCCCGAGCAGATTTTTGCCGGATGGTATGACGTGCAGTCCAAGGTGGGCAAAGACGAAATGAAAAACATTCCG TTCGGCGCCGTGGCCATGTGGTCCATGGTCGACAAACTGGGTGCCGGCCTGCAGCAGCTGATGGCAGGTGCGCGCAAGTT TGAACTTTCCTGCATTTCGCGCGAAGACATTGCGGCCTGCAACCGCGAAACAGAAAAGGAAACGAGAATTCCTTTCATCA CCGACGTGCAGGACGAATTTGCCAAAGCCATTCTGCGCAGCTAA
Upstream 100 bases:
>100_bases AAATATAAATCATATTTTTTTTTCATTTCCTGTTTGCCCCGCCGAGCGGTTACACGCTATATGGGCTGCCTTACAGCGAA ATCATCCTTATGGAGGCCTT
Downstream 100 bases:
>100_bases GGACTGACAGCTCAGTCCGCTTTCCATACCAGACAAGGGGCGCATCCTTCGGGATGCGCCCCTTTTTCAGCATTACAGGC TGCAGTATGCCATACGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Glutamate Synthase-Related Protein; Glutamate Synthase-Like Protein; Glutamate Synthase GltB2 Subunit; Glutamate Synthase -Like Protein; Glutamate Synthase; Glutamate Synthase Subunit; Glutamate Synthase Domain Protein
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MNTPVKNNDVLGTTNRGNIVESGLCSLCRADCMGKCETWLSCLKGRDTLYPRDFGLVTAGSGNTTHVGVSYNSLRIQGYN YGAHGMGENGSKAQSGDALFTDASLETSFGADEKTKCRFPLMTGALGSTFIAAKYWDSFAVGCALCGIPIVVGENVVGVD RKSSLENGRITSAPELERRINTYLRYYDGYGAIIVQMNVEDTRNGVAEYIAEKYGDKVILELKWGQGAKDIGGEIIVESL DYALFLQERGYLVDPDPSRAEVQESFKSGAIKGFARHSRLGYTNLGTWEQVRENFMNSVDYLRKLGFKRISLKTGSYGMQ ALAMSIKLATEARLDLLTIDGSGGGTGMSPWDMMETWGVPSILLHAKAYEYASMLAAKGERVVDMSFAGGFAKSSQIFKA LALGAPYTKLICMGRAMMIPGFLGSNIEGVLRPERREAVCGNWDKLPRTVTDFGTTPEQIFAGWYDVQSKVGKDEMKNIP FGAVAMWSMVDKLGAGLQQLMAGARKFELSCISREDIAACNRETEKETRIPFITDVQDEFAKAILRS
Sequences:
>Translated_547_residues MNTPVKNNDVLGTTNRGNIVESGLCSLCRADCMGKCETWLSCLKGRDTLYPRDFGLVTAGSGNTTHVGVSYNSLRIQGYN YGAHGMGENGSKAQSGDALFTDASLETSFGADEKTKCRFPLMTGALGSTFIAAKYWDSFAVGCALCGIPIVVGENVVGVD RKSSLENGRITSAPELERRINTYLRYYDGYGAIIVQMNVEDTRNGVAEYIAEKYGDKVILELKWGQGAKDIGGEIIVESL DYALFLQERGYLVDPDPSRAEVQESFKSGAIKGFARHSRLGYTNLGTWEQVRENFMNSVDYLRKLGFKRISLKTGSYGMQ ALAMSIKLATEARLDLLTIDGSGGGTGMSPWDMMETWGVPSILLHAKAYEYASMLAAKGERVVDMSFAGGFAKSSQIFKA LALGAPYTKLICMGRAMMIPGFLGSNIEGVLRPERREAVCGNWDKLPRTVTDFGTTPEQIFAGWYDVQSKVGKDEMKNIP FGAVAMWSMVDKLGAGLQQLMAGARKFELSCISREDIAACNRETEKETRIPFITDVQDEFAKAILRS >Mature_547_residues MNTPVKNNDVLGTTNRGNIVESGLCSLCRADCMGKCETWLSCLKGRDTLYPRDFGLVTAGSGNTTHVGVSYNSLRIQGYN YGAHGMGENGSKAQSGDALFTDASLETSFGADEKTKCRFPLMTGALGSTFIAAKYWDSFAVGCALCGIPIVVGENVVGVD RKSSLENGRITSAPELERRINTYLRYYDGYGAIIVQMNVEDTRNGVAEYIAEKYGDKVILELKWGQGAKDIGGEIIVESL DYALFLQERGYLVDPDPSRAEVQESFKSGAIKGFARHSRLGYTNLGTWEQVRENFMNSVDYLRKLGFKRISLKTGSYGMQ ALAMSIKLATEARLDLLTIDGSGGGTGMSPWDMMETWGVPSILLHAKAYEYASMLAAKGERVVDMSFAGGFAKSSQIFKA LALGAPYTKLICMGRAMMIPGFLGSNIEGVLRPERREAVCGNWDKLPRTVTDFGTTPEQIFAGWYDVQSKVGKDEMKNIP FGAVAMWSMVDKLGAGLQQLMAGARKFELSCISREDIAACNRETEKETRIPFITDVQDEFAKAILRS
Specific function: Unknown
COG id: COG0069
COG function: function code E; Glutamate synthase domain 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59824; Mature: 59824
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPVKNNDVLGTTNRGNIVESGLCSLCRADCMGKCETWLSCLKGRDTLYPRDFGLVTAG CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEC SGNTTHVGVSYNSLRIQGYNYGAHGMGENGSKAQSGDALFTDASLETSFGADEKTKCRFP CCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC LMTGALGSTFIAAKYWDSFAVGCALCGIPIVVGENVVGVDRKSSLENGRITSAPELERRI CHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHHH NTYLRYYDGYGAIIVQMNVEDTRNGVAEYIAEKYGDKVILELKWGQGAKDIGGEIIVESL HHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCHHHHHHH DYALFLQERGYLVDPDPSRAEVQESFKSGAIKGFARHSRLGYTNLGTWEQVRENFMNSVD CEEEEEECCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YLRKLGFKRISLKTGSYGMQALAMSIKLATEARLDLLTIDGSGGGTGMSPWDMMETWGVP HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCC SILLHAKAYEYASMLAAKGERVVDMSFAGGFAKSSQIFKALALGAPYTKLICMGRAMMIP HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCC GFLGSNIEGVLRPERREAVCGNWDKLPRTVTDFGTTPEQIFAGWYDVQSKVGKDEMKNIP CCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCC FGAVAMWSMVDKLGAGLQQLMAGARKFELSCISREDIAACNRETEKETRIPFITDVQDEF CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCHHHHCCCEEECHHHHH AKAILRS HHHHHCC >Mature Secondary Structure MNTPVKNNDVLGTTNRGNIVESGLCSLCRADCMGKCETWLSCLKGRDTLYPRDFGLVTAG CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCEEEEC SGNTTHVGVSYNSLRIQGYNYGAHGMGENGSKAQSGDALFTDASLETSFGADEKTKCRFP CCCCEEEEEEECEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC LMTGALGSTFIAAKYWDSFAVGCALCGIPIVVGENVVGVDRKSSLENGRITSAPELERRI CHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCCCCCCCCCCCCCHHHHHHH NTYLRYYDGYGAIIVQMNVEDTRNGVAEYIAEKYGDKVILELKWGQGAKDIGGEIIVESL HHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHCCCHHHHHHH DYALFLQERGYLVDPDPSRAEVQESFKSGAIKGFARHSRLGYTNLGTWEQVRENFMNSVD CEEEEEECCCEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YLRKLGFKRISLKTGSYGMQALAMSIKLATEARLDLLTIDGSGGGTGMSPWDMMETWGVP HHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCC SILLHAKAYEYASMLAAKGERVVDMSFAGGFAKSSQIFKALALGAPYTKLICMGRAMMIP HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCHHCCC GFLGSNIEGVLRPERREAVCGNWDKLPRTVTDFGTTPEQIFAGWYDVQSKVGKDEMKNIP CCCCCCCCCCCCCCHHHHHCCCHHHCCCHHHHCCCCHHHHHHHHHHHHHHCCHHHHHCCC FGAVAMWSMVDKLGAGLQQLMAGARKFELSCISREDIAACNRETEKETRIPFITDVQDEF CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCCCHHHHCCCEEECHHHHH AKAILRS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA