Click here to switch to the map view.

The map label for this gene is asrB [H]

Identifier: 78356260

GI number: 78356260

Start: 1240375

End: 1241217

Strand: Direct

Name: asrB [H]

Synonym: Dde_1213

Alternate gene names: 78356260

Gene position: 1240375-1241217 (Clockwise)

Preceding gene: 78356259

Following gene: 78356261

Centisome position: 33.25

GC content: 55.87

Gene sequence:

>843_bases
ATGCATAACAACCCCAGCCTGCCTGCTCTGGCAACTGTTTTGGAGGTTGTGGAAGAAACGCCCAACATCAAGACCTTTCG
TGTCCGCTTCAACGACGAAAGCCTGATGGAGTCGTTTTCCTTCATGCCCGGTCAGGTGGGGCAGCTTTCCATATTCGGCG
TGGGTGAATCGACGTTTGTCATCAACTCTTCGCCCACGCGCATGGATTATCTGCAGTTCAGCGTAATGAAGGTGGGCGAA
GTGACAAGCCGCCTGCATCAGCTGAAAGCCGGTGATACCGTGGGCGTGCGTGCGCCGCTGGGCAACTGGTTTCCCGTGGA
TGAAATGAAAGGAAAAGACGTGGTGTTTGTTGCGGGGGGCATAGGTATGGCTCCGTTGCGCACACTGCTGGTCTATATGC
TGGACAATCGCGCCGACTACGGTAAGATCACTCTGCTGTACGGCGCGCGCTCTCCCGTTGATCTGAGCTTCAAGTACGAC
GTGGAAGAGTGGATGGCGCGGGATGATCTGGACGTGGTGCTTACTGTGGACGCACCTGCCGAAGGCTGGGAAGAATCCGC
CACGCGTCGTGTCGGGCTGATTCCCAATGTGTTGCTGGAACTGAACCCCGCGCCGGAAAACTGCGTGGCCGTAACCTGCG
GCCCGCCCATCATGATCAAATTCACCCTGCAGGCGTTGAAAAAGCTTGAATTCGGGGATGAACAGATCATCACCACTCTT
GAAAAACGCATGAAGTGCGGCGTCGGACTGTGCGGCCGGTGCAACATCGGCACAAAGTATGTCTGTGTCGACGGACCGGT
TTTCCGTTACTCTGACCTGAAGGACTTGCCTAACGAACTCTAG

Upstream 100 bases:

>100_bases
CGCTGCATCAAAAGCTGCCCTGTCTCGCTGGATATCCGCGCCGTGGTGCAGGCCGCACAGAACCATAACGCAGTCCCTGA
AGAAGCCGAGGAGAAAGCCG

Downstream 100 bases:

>100_bases
CCCCTTGAAGGAGGCATCATGGCGGACCTGTTTAAAGCCGGCGACATCGTGCGCGCTGCGGAGGAAATTGAAATCCGCGG
CGAAGACTTCTACCGCCGCC

Product: hydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MHNNPSLPALATVLEVVEETPNIKTFRVRFNDESLMESFSFMPGQVGQLSIFGVGESTFVINSSPTRMDYLQFSVMKVGE
VTSRLHQLKAGDTVGVRAPLGNWFPVDEMKGKDVVFVAGGIGMAPLRTLLVYMLDNRADYGKITLLYGARSPVDLSFKYD
VEEWMARDDLDVVLTVDAPAEGWEESATRRVGLIPNVLLELNPAPENCVAVTCGPPIMIKFTLQALKKLEFGDEQIITTL
EKRMKCGVGLCGRCNIGTKYVCVDGPVFRYSDLKDLPNEL

Sequences:

>Translated_280_residues
MHNNPSLPALATVLEVVEETPNIKTFRVRFNDESLMESFSFMPGQVGQLSIFGVGESTFVINSSPTRMDYLQFSVMKVGE
VTSRLHQLKAGDTVGVRAPLGNWFPVDEMKGKDVVFVAGGIGMAPLRTLLVYMLDNRADYGKITLLYGARSPVDLSFKYD
VEEWMARDDLDVVLTVDAPAEGWEESATRRVGLIPNVLLELNPAPENCVAVTCGPPIMIKFTLQALKKLEFGDEQIITTL
EKRMKCGVGLCGRCNIGTKYVCVDGPVFRYSDLKDLPNEL
>Mature_280_residues
MHNNPSLPALATVLEVVEETPNIKTFRVRFNDESLMESFSFMPGQVGQLSIFGVGESTFVINSSPTRMDYLQFSVMKVGE
VTSRLHQLKAGDTVGVRAPLGNWFPVDEMKGKDVVFVAGGIGMAPLRTLLVYMLDNRADYGKITLLYGARSPVDLSFKYD
VEEWMARDDLDVVLTVDAPAEGWEESATRRVGLIPNVLLELNPAPENCVAVTCGPPIMIKFTLQALKKLEFGDEQIITTL
EKRMKCGVGLCGRCNIGTKYVCVDGPVFRYSDLKDLPNEL

Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Drosophila melanogaster, GI281366101, Length=175, Percent_Identity=31.4285714285714, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24662934, Length=175, Percent_Identity=31.4285714285714, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24662938, Length=175, Percent_Identity=31.4285714285714, Blast_Score=68, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- InterPro:   IPR014260 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30977; Mature: 30977

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNNPSLPALATVLEVVEETPNIKTFRVRFNDESLMESFSFMPGQVGQLSIFGVGESTFV
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCEEEE
INSSPTRMDYLQFSVMKVGEVTSRLHQLKAGDTVGVRAPLGNWFPVDEMKGKDVVFVAGG
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
IGMAPLRTLLVYMLDNRADYGKITLLYGARSPVDLSFKYDVEEWMARDDLDVVLTVDAPA
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCEEEEEECCCC
EGWEESATRRVGLIPNVLLELNPAPENCVAVTCGPPIMIKFTLQALKKLEFGDEQIITTL
CCHHHHHHCEECCCCEEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHCCCCCHHHHHHH
EKRMKCGVGLCGRCNIGTKYVCVDGPVFRYSDLKDLPNEL
HHHHHCCCCCCCCCCCCCEEEEECCCEEECCCHHCCCCCC
>Mature Secondary Structure
MHNNPSLPALATVLEVVEETPNIKTFRVRFNDESLMESFSFMPGQVGQLSIFGVGESTFV
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCCEEEEEECCCEEEE
INSSPTRMDYLQFSVMKVGEVTSRLHQLKAGDTVGVRAPLGNWFPVDEMKGKDVVFVAGG
ECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
IGMAPLRTLLVYMLDNRADYGKITLLYGARSPVDLSFKYDVEEWMARDDLDVVLTVDAPA
CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECHHHHHCCCCCEEEEEECCCC
EGWEESATRRVGLIPNVLLELNPAPENCVAVTCGPPIMIKFTLQALKKLEFGDEQIITTL
CCHHHHHHCEECCCCEEEEEECCCCCCCEEEECCCCEEEEEHHHHHHHCCCCCHHHHHHH
EKRMKCGVGLCGRCNIGTKYVCVDGPVFRYSDLKDLPNEL
HHHHHCCCCCCCCCCCCCEEEEECCCEEECCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]