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The map label for this gene is fdhB [H]

Identifier: 78356258

GI number: 78356258

Start: 1238332

End: 1239303

Strand: Direct

Name: fdhB [H]

Synonym: Dde_1211

Alternate gene names: 78356258

Gene position: 1238332-1239303 (Clockwise)

Preceding gene: 78356257

Following gene: 78356259

Centisome position: 33.2

GC content: 58.33

Gene sequence:

>972_bases
ATGAGCGTGCTGCAGGAATTGAAAGAACAGATACGCGCCGCCCTGCCGGAACTCGACATGGTTCTGGGCTGGGAGCAGGG
CTTTGACGCCCTGCACATGCGGCCTTTGTTTATCCGTACCGAAAAAGATCTTGAGCGGCTTGTGCTCAACCCGCTGTGCG
TGCACAGCCTTGCCACCTATCTGCCGGGTCTGCTGCGCGGGGCCGGAAACGATAAAAAGGTGGGCCTTGTGGTCAAAGGC
TGTGATTCGCGTGCGGTCATACAGCTGGTGCAGGAAAAGCTCATCCCCCGCGACAGAGTGGTCATGTTCGGCTTCGGCTG
CAACGGCATAGTAAGCCTGCAGAAGCTGGAAGCCGGAGCACAGGGCTGTACCGGTATCGGCAGCGTGGAGTTTGCCGGCG
ACAAGGTTGTGCTTTCGGCGCCGGATACCAAGGTGGAACTGCCGTTTGCAGAGATACGCAGCGGTAAATGCGAAACCTGC
CGGTATCATAACGCCATAGATGCCGATCATTTTGCCGGAGCCCGTGTGGAAGAGGGCACAGTGCCCGCAAAGCATCCCAC
ACTGGAAGAGTTTGAAAAACTGCCGTTGTCCGAGCGTTTTGCTTTCTGGCAGGAGCAGATGCGGCGCTGTGTGCGTTGTT
ACGCCTGCCGCAACACCTGCCCCATGTGCGTATGCCGGGACCACTGCATTGCCACGTCGCGCAATCCGCACTGGCTTACG
CAGGAATCCAGCACCGCGGAGAACTTCATGTTCCAGATGATCCATGTGATGCACCTGACAGGGCGCTGTGTGGAGTGCGG
TGAATGTGAACGCGCCTGTCCGCTGGATATCCCGCTTATGCTGCTGCGCCGCTCCATGAACGGAGTGGTCAGGGAGCTTT
TTGCCTACGAAAGCGGTACCGACCCCGATGCCACGCCCCCTCTGCTTACCTATCAGGTAGAGGAAGAGACCATTAACGAG
CGAGGCTGGTAA

Upstream 100 bases:

>100_bases
CCAGAATGACAGGCGGAAACGGCTATGCCGAACTGGCCGACATCGAGCGTGCGGTGCAGGCCGGTCAGGGATGCCCCTGC
CATCTCAAGGAGGTGCGCTC

Downstream 100 bases:

>100_bases
TGAGCAGACAATTCATCAGCCATGACAAGATGACCGCGTGGCTCGACGCACTTTCACGCGACCGCGCCGTACTGGTGCCC
ATGGACGACTGCGGCACGGT

Product: hydrogenase, iron-sulfur cluster-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSVLQELKEQIRAALPELDMVLGWEQGFDALHMRPLFIRTEKDLERLVLNPLCVHSLATYLPGLLRGAGNDKKVGLVVKG
CDSRAVIQLVQEKLIPRDRVVMFGFGCNGIVSLQKLEAGAQGCTGIGSVEFAGDKVVLSAPDTKVELPFAEIRSGKCETC
RYHNAIDADHFAGARVEEGTVPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATSRNPHWLT
QESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLMLLRRSMNGVVRELFAYESGTDPDATPPLLTYQVEEETINE
RGW

Sequences:

>Translated_323_residues
MSVLQELKEQIRAALPELDMVLGWEQGFDALHMRPLFIRTEKDLERLVLNPLCVHSLATYLPGLLRGAGNDKKVGLVVKG
CDSRAVIQLVQEKLIPRDRVVMFGFGCNGIVSLQKLEAGAQGCTGIGSVEFAGDKVVLSAPDTKVELPFAEIRSGKCETC
RYHNAIDADHFAGARVEEGTVPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATSRNPHWLT
QESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLMLLRRSMNGVVRELFAYESGTDPDATPPLLTYQVEEETINE
RGW
>Mature_322_residues
SVLQELKEQIRAALPELDMVLGWEQGFDALHMRPLFIRTEKDLERLVLNPLCVHSLATYLPGLLRGAGNDKKVGLVVKGC
DSRAVIQLVQEKLIPRDRVVMFGFGCNGIVSLQKLEAGAQGCTGIGSVEFAGDKVVLSAPDTKVELPFAEIRSGKCETCR
YHNAIDADHFAGARVEEGTVPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATSRNPHWLTQ
ESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLMLLRRSMNGVVRELFAYESGTDPDATPPLLTYQVEEETINER
GW

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 36290; Mature: 36159

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLQELKEQIRAALPELDMVLGWEQGFDALHMRPLFIRTEKDLERLVLNPLCVHSLATY
CHHHHHHHHHHHHHCCHHHHHHCHHHCCCHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LPGLLRGAGNDKKVGLVVKGCDSRAVIQLVQEKLIPRDRVVMFGFGCNGIVSLQKLEAGA
HHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCC
QGCTGIGSVEFAGDKVVLSAPDTKVELPFAEIRSGKCETCRYHNAIDADHFAGARVEEGT
CCCCCCCCEEECCCEEEEECCCCEEECCHHHHCCCCCCCHHCCCCCCCHHCCCCCCCCCC
VPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATSRNPHWLT
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHCCCHHHCCCCCCCEEC
QESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLMLLRRSMNGVVRELFAYESGT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DPDATPPLLTYQVEEETINERGW
CCCCCCCEEEEEECHHHHCCCCC
>Mature Secondary Structure 
SVLQELKEQIRAALPELDMVLGWEQGFDALHMRPLFIRTEKDLERLVLNPLCVHSLATY
HHHHHHHHHHHHHCCHHHHHHCHHHCCCHHCCCEEEEECHHHHHHHHHHHHHHHHHHHH
LPGLLRGAGNDKKVGLVVKGCDSRAVIQLVQEKLIPRDRVVMFGFGCNGIVSLQKLEAGA
HHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCC
QGCTGIGSVEFAGDKVVLSAPDTKVELPFAEIRSGKCETCRYHNAIDADHFAGARVEEGT
CCCCCCCCEEECCCEEEEECCCCEEECCHHHHCCCCCCCHHCCCCCCCHHCCCCCCCCCC
VPAKHPTLEEFEKLPLSERFAFWQEQMRRCVRCYACRNTCPMCVCRDHCIATSRNPHWLT
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEHCCCHHHCCCCCCCEEC
QESSTAENFMFQMIHVMHLTGRCVECGECERACPLDIPLMLLRRSMNGVVRELFAYESGT
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
DPDATPPLLTYQVEEETINERGW
CCCCCCCEEEEEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3531194 [H]