Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is yidJ [C]

Identifier: 78356248

GI number: 78356248

Start: 1228288

End: 1229811

Strand: Direct

Name: yidJ [C]

Synonym: Dde_1201

Alternate gene names: 78356248

Gene position: 1228288-1229811 (Clockwise)

Preceding gene: 78356247

Following gene: 78356249

Centisome position: 32.93

GC content: 57.48

Gene sequence:

>1524_bases
ATGACTTTTGACCGCAGTAAAATCAAAAACGTAGTCATGATCATGCTGGATACCCTGCAGTTCAACTATCTGGGCTGCTA
CGGCAACAAGCAGGTCAAGACTCCGAACCTGGACAGGTTCGCCCGTCAGTCCGTTCTTTTTGAAAATGCCTACAGCGAAG
GGCTGCCTACCATTCCGGTGCGCCGTGCGCTGATGACCGGCCGCTTCACCCTGCCTTACGGCGGGTGGAAGCCCCTTTCC
GGCGACGACACCACCATCACCGACATCCTCTGGGGGCGCAATGTGCAGACCGCGCTCATTTATGACACCGCTCCCATGCG
CCTTGCCAAGTTCGGCTATTCCAGAGGTTTTGACTATGTGGATTTCTGCCCCGGGCAGGAACTCGATCATACCACCTTTG
CCGACATGCCGCTGGATCCGGCTCTCAAGCCGGAAGATTTCACGTCGCCTTCCATGGTCTGGGACAAGGACGGCAACCTG
ATTGATGATGACAGCAAGCAATTGTTGGACGAGATAGGTTGTTTTCTGCGTCAGATGCAGCACCGCCGCAGTGACGCCGA
CAGTTATGTGGCCAAGGTGATGAACCGGACGGAATACTGGCTGCGCGAACGGCGCGACAAAAGCCGTCCGTTCTTCCTGT
GGGTGGATTCCTTTGATCCGCACGAGCCCTGGGATCCGCCGTCAGTATGGGAAGGCACTCCCTGCCCGTACGACCCCGAC
TACGAAGGAAACCCCATTCTGCTGGCTCCGTGGACACCGGTGGAAGGACGCATTTCCGAACGCGAATGCGAACATGTGCG
CGCCCTGTACATGGAAAAAATCACCATGGTGGATAAATGGGTGGGACGCATTCTTGATTCGCTGCGCGAACAGGGACTGA
TGGACGAGACCATGGTTGTGGTCATGTCCGACCACGGGCAGCCCATGGGCAACGGTGAACACGGGCACGGCATCATGCGC
AAGTCGCGCCCGTGGCCCTATGAAGAACTGGTGCACGTACCTCTGCTTATGCACATTCCCGGTGTGCAGGGCGGGCAGCG
CATATCGTCTTTTGTCCAGAATGTGGATGTGACCGCCACCATCATGGATGTGATGAATCTGGCCGACACCGAAGACGGTG
TGTCCGATCATGGCATGAACACATTCGGCGCCGAGAGCATGCAGGGCGAAAGCCTGCTGCCGCTCATGCGGGGCGAGGCC
GATTCTGTGCGCGAGTACGCCATTGCAGGATATTACGGCATGTCGTGGTCCATCATCACCGAAGACTACAGCTATGTGCA
CTGGCTTGTCAGCGAAGACGAAAAGAACCGCGCCGACTGCGTGGAAGGCGCCGACAAGGAAATGTCCGAGGAGATGTGGA
CCTGCACCGCAGGAGCCAAGGTTCAGATGCCGGAACATAACGAACTGTATGACAGGCGTACCGACCCCTTCCAGCTGAAC
AACATTGCCGCGCAGAAGCCCGAAGTGGCCGAAGAACTGCTGCAGAAGCTCAAGCTGGTCATTGGCGGGCTGCGCACGAC
CTAA

Upstream 100 bases:

>100_bases
TCGTACGCGTACCCCTGACAGGCCGCGCGCGGCCATCTGGCCGGCACAGGGAACACGCTGCGGTGAGCTTTTTCACAATC
AAGCAAGCAGAGGGTTTTTC

Downstream 100 bases:

>100_bases
CTCCGCAAAATACCCGCGCCGCCGGCATGGTCTGCCGGCGGCGGATGATATCATATCAGAGGTGATTCATGTTTACTCAG
CTTACCGACGCAGACTTTGA

Product: sulfatase

Products: NA

Alternate protein names: Cys-type sulfatase [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTFDRSKIKNVVMIMLDTLQFNYLGCYGNKQVKTPNLDRFARQSVLFENAYSEGLPTIPVRRALMTGRFTLPYGGWKPLS
GDDTTITDILWGRNVQTALIYDTAPMRLAKFGYSRGFDYVDFCPGQELDHTTFADMPLDPALKPEDFTSPSMVWDKDGNL
IDDDSKQLLDEIGCFLRQMQHRRSDADSYVAKVMNRTEYWLRERRDKSRPFFLWVDSFDPHEPWDPPSVWEGTPCPYDPD
YEGNPILLAPWTPVEGRISERECEHVRALYMEKITMVDKWVGRILDSLREQGLMDETMVVVMSDHGQPMGNGEHGHGIMR
KSRPWPYEELVHVPLLMHIPGVQGGQRISSFVQNVDVTATIMDVMNLADTEDGVSDHGMNTFGAESMQGESLLPLMRGEA
DSVREYAIAGYYGMSWSIITEDYSYVHWLVSEDEKNRADCVEGADKEMSEEMWTCTAGAKVQMPEHNELYDRRTDPFQLN
NIAAQKPEVAEELLQKLKLVIGGLRTT

Sequences:

>Translated_507_residues
MTFDRSKIKNVVMIMLDTLQFNYLGCYGNKQVKTPNLDRFARQSVLFENAYSEGLPTIPVRRALMTGRFTLPYGGWKPLS
GDDTTITDILWGRNVQTALIYDTAPMRLAKFGYSRGFDYVDFCPGQELDHTTFADMPLDPALKPEDFTSPSMVWDKDGNL
IDDDSKQLLDEIGCFLRQMQHRRSDADSYVAKVMNRTEYWLRERRDKSRPFFLWVDSFDPHEPWDPPSVWEGTPCPYDPD
YEGNPILLAPWTPVEGRISERECEHVRALYMEKITMVDKWVGRILDSLREQGLMDETMVVVMSDHGQPMGNGEHGHGIMR
KSRPWPYEELVHVPLLMHIPGVQGGQRISSFVQNVDVTATIMDVMNLADTEDGVSDHGMNTFGAESMQGESLLPLMRGEA
DSVREYAIAGYYGMSWSIITEDYSYVHWLVSEDEKNRADCVEGADKEMSEEMWTCTAGAKVQMPEHNELYDRRTDPFQLN
NIAAQKPEVAEELLQKLKLVIGGLRTT
>Mature_506_residues
TFDRSKIKNVVMIMLDTLQFNYLGCYGNKQVKTPNLDRFARQSVLFENAYSEGLPTIPVRRALMTGRFTLPYGGWKPLSG
DDTTITDILWGRNVQTALIYDTAPMRLAKFGYSRGFDYVDFCPGQELDHTTFADMPLDPALKPEDFTSPSMVWDKDGNLI
DDDSKQLLDEIGCFLRQMQHRRSDADSYVAKVMNRTEYWLRERRDKSRPFFLWVDSFDPHEPWDPPSVWEGTPCPYDPDY
EGNPILLAPWTPVEGRISERECEHVRALYMEKITMVDKWVGRILDSLREQGLMDETMVVVMSDHGQPMGNGEHGHGIMRK
SRPWPYEELVHVPLLMHIPGVQGGQRISSFVQNVDVTATIMDVMNLADTEDGVSDHGMNTFGAESMQGESLLPLMRGEAD
SVREYAIAGYYGMSWSIITEDYSYVHWLVSEDEKNRADCVEGADKEMSEEMWTCTAGAKVQMPEHNELYDRRTDPFQLNN
IAAQKPEVAEELLQKLKLVIGGLRTT

Specific function: Has sulfatase activity toward para-nitrophenyl sulfate, which is increased in presence of calcium ion [H]

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI39930577, Length=529, Percent_Identity=23.2514177693762, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24647401, Length=233, Percent_Identity=25.7510729613734, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: =3.1.6.1 [H]

Molecular weight: Translated: 57966; Mature: 57835

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFDRSKIKNVVMIMLDTLQFNYLGCYGNKQVKTPNLDRFARQSVLFENAYSEGLPTIPV
CCCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
RRALMTGRFTLPYGGWKPLSGDDTTITDILWGRNVQTALIYDTAPMRLAKFGYSRGFDYV
HHHHHCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
DFCPGQELDHTTFADMPLDPALKPEDFTSPSMVWDKDGNLIDDDSKQLLDEIGCFLRQMQ
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH
HRRSDADSYVAKVMNRTEYWLRERRDKSRPFFLWVDSFDPHEPWDPPSVWEGTPCPYDPD
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
YEGNPILLAPWTPVEGRISERECEHVRALYMEKITMVDKWVGRILDSLREQGLMDETMVV
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VMSDHGQPMGNGEHGHGIMRKSRPWPYEELVHVPLLMHIPGVQGGQRISSFVQNVDVTAT
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCCCCCHHHHHHHHHCCCHHHH
IMDVMNLADTEDGVSDHGMNTFGAESMQGESLLPLMRGEADSVREYAIAGYYGMSWSIIT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEECCEEEEEE
EDYSYVHWLVSEDEKNRADCVEGADKEMSEEMWTCTAGAKVQMPEHNELYDRRTDPFQLN
CCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHEEECCCCEEECCCCHHHHHCCCCCEEEC
NIAAQKPEVAEELLQKLKLVIGGLRTT
CCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFDRSKIKNVVMIMLDTLQFNYLGCYGNKQVKTPNLDRFARQSVLFENAYSEGLPTIPV
CCCHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
RRALMTGRFTLPYGGWKPLSGDDTTITDILWGRNVQTALIYDTAPMRLAKFGYSRGFDYV
HHHHHCCCEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCC
DFCPGQELDHTTFADMPLDPALKPEDFTSPSMVWDKDGNLIDDDSKQLLDEIGCFLRQMQ
CCCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHH
HRRSDADSYVAKVMNRTEYWLRERRDKSRPFFLWVDSFDPHEPWDPPSVWEGTPCPYDPD
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
YEGNPILLAPWTPVEGRISERECEHVRALYMEKITMVDKWVGRILDSLREQGLMDETMVV
CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
VMSDHGQPMGNGEHGHGIMRKSRPWPYEELVHVPLLMHIPGVQGGQRISSFVQNVDVTAT
EECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHEECCCCCCHHHHHHHHHCCCHHHH
IMDVMNLADTEDGVSDHGMNTFGAESMQGESLLPLMRGEADSVREYAIAGYYGMSWSIIT
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEECCEEEEEE
EDYSYVHWLVSEDEKNRADCVEGADKEMSEEMWTCTAGAKVQMPEHNELYDRRTDPFQLN
CCCCEEEEEECCCCCCHHHHHCCCHHHHHHHHEEECCCCEEECCCCHHHHHCCCCCEEEC
NIAAQKPEVAEELLQKLKLVIGGLRTT
CCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA