| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356243
Identifier: 78356243
GI number: 78356243
Start: 1224208
End: 1224690
Strand: Reverse
Name: 78356243
Synonym: Dde_1196
Alternate gene names: NA
Gene position: 1224690-1224208 (Counterclockwise)
Preceding gene: 78356244
Following gene: 78356242
Centisome position: 32.83
GC content: 54.24
Gene sequence:
>483_bases ATGAGCAGTAAATATGATGTCCGCTTCATAAACCCGTTTCTCAGCGCAGTCATTGACGTGCTGGGCACCATGGCCATGGT GCAGGCTACGCCGGGCAAGCCATATATCAACACTAAAAGAGTAGCCGTGGGTGATGTTACCGGCCTTATCGGCATCAACG GCCAGGCCACCGGTGTCATTTCGCTCACGCTTGAAGAAAAATGCATTCTGCACATCGTCAGCAACATGCTGGGCGAAGAG TATTCACGCATCAACGATGACATAGCCGATGCCGTAGGCGAACTGACCAACATGATCGCAGGACAGGCCCGCGCGCACCT TGCCAACGAAGGGCTGAAGTTTCAGGCTTCCACCCCCACGGTCATCATCGGAAAAAATCACACGCTGAGCCACGTCAACA AAGAACCCATTCTCGCCATCCCCTTCACCACGCCTCAGGGGCAGCTGGTGGTGGAAATGTCCATAGGCGCCATCGAAGAA TAG
Upstream 100 bases:
>100_bases CCGCTCCGCTCTGCCCCAACCCGCTGCAGCAGCACCACATGATGCGGAGCGGACGGGCGCCAGACTTGACACGGCGCCCC AGTTCTGGGATTCACTCGCC
Downstream 100 bases:
>100_bases CCGTGCCGGACATTACCATAGCCACAGAACGCTGCATCGGGTGCGCAGAGTGCGCGCGCGACTGTCCCACAGGCATCATC CGCATGGAAAACGGCATACC
Product: chemotaxis protein CheX
Products: NA
Alternate protein names: CheC Domain Protein; CheC Domain-Containing Protein; CheC-Like Protein; Inhibitor Of MCP Methylation; Chemotaxis Protein; Inhibitor Of MCP Methylation CheC-Like Protein; Chec Domain Protein; Chemotaxis Protein Phosphatase CheX; CheC-Like Family Protein; Transcriptional Regulator; Inhibitor Of MCP Methylation CheC N; Inhibitor Of MCP Methylation CheC-Like
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSSKYDVRFINPFLSAVIDVLGTMAMVQATPGKPYINTKRVAVGDVTGLIGINGQATGVISLTLEEKCILHIVSNMLGEE YSRINDDIADAVGELTNMIAGQARAHLANEGLKFQASTPTVIIGKNHTLSHVNKEPILAIPFTTPQGQLVVEMSIGAIEE
Sequences:
>Translated_160_residues MSSKYDVRFINPFLSAVIDVLGTMAMVQATPGKPYINTKRVAVGDVTGLIGINGQATGVISLTLEEKCILHIVSNMLGEE YSRINDDIADAVGELTNMIAGQARAHLANEGLKFQASTPTVIIGKNHTLSHVNKEPILAIPFTTPQGQLVVEMSIGAIEE >Mature_159_residues SSKYDVRFINPFLSAVIDVLGTMAMVQATPGKPYINTKRVAVGDVTGLIGINGQATGVISLTLEEKCILHIVSNMLGEEY SRINDDIADAVGELTNMIAGQARAHLANEGLKFQASTPTVIIGKNHTLSHVNKEPILAIPFTTPQGQLVVEMSIGAIEE
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17088; Mature: 16957
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKYDVRFINPFLSAVIDVLGTMAMVQATPGKPYINTKRVAVGDVTGLIGINGQATGVI CCCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCEEEEECCCCCCEEE SLTLEEKCILHIVSNMLGEEYSRINDDIADAVGELTNMIAGQARAHLANEGLKFQASTPT EEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE VIIGKNHTLSHVNKEPILAIPFTTPQGQLVVEMSIGAIEE EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC >Mature Secondary Structure SSKYDVRFINPFLSAVIDVLGTMAMVQATPGKPYINTKRVAVGDVTGLIGINGQATGVI CCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEECCCEEEEECCCCCCEEE SLTLEEKCILHIVSNMLGEEYSRINDDIADAVGELTNMIAGQARAHLANEGLKFQASTPT EEEECHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCE VIIGKNHTLSHVNKEPILAIPFTTPQGQLVVEMSIGAIEE EEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA