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The map label for this gene is pfpI [H]

Identifier: 78356216

GI number: 78356216

Start: 1193404

End: 1194171

Strand: Direct

Name: pfpI [H]

Synonym: Dde_1169

Alternate gene names: 78356216

Gene position: 1193404-1194171 (Clockwise)

Preceding gene: 78356212

Following gene: 78356220

Centisome position: 31.99

GC content: 58.33

Gene sequence:

>768_bases
ATGCAGGGCTTTTATCCGGTGCATGCACGGTTGTACATCGCGCCGTATTATGTGCTATGGCAGAGCATCTGCAATGTCGG
CTACGTTGCCGCCGTCACTGCGGCGGCTGTGTTCATTACCTGTTCCGCCATGCTGCCTGCGGGCAGCGGCGGGGCGGATT
TATCCCGCAAGGAGACTAAAATGGCTGAAAAACGTATTCTGATGCTGGTGGGTGATTTTGTGGAAGACTATGAGGCTATG
GTGCCTTTTCAGATGCTGGGTATGGTCGGGCATACCGTGCACGCCGTGTGCCCCGGTAAAAAAGCCGGTGAAACGGTTAA
AACCGCGGTGCACGATTTTGAAGGCGACCAGACCTATACGGAAAAGCCCGGACACAACTTTATGCTGAACTGCGATTTTG
ACAGCGTTGATGTGGCGCACTATGACGCGCTGGTTGTTCCCGGCGGCCGTGCACCGGAATATATCCGGCTCAACGCCCGG
GTTATTGAGATTGTGCGGCAGTTTGACAAGGCCCGCAAGCCCATAGCAGCCGTGTGCCACGGACAGCAGGTGCTGGTGAC
TGCAGGCGTGCTGCAGGGGCACACCTGCACGGCTTATCCCGCGGTAAAGCCTGACGTGGAGGCGGCGGGCGCCACATGGT
GCGAGGTGAACGACACGGCTTCAAACGCCTGCGTCAGCGGGCATGTTGTCACTGCGCCTGCGTGGCCTGCCCACCCCGAA
TGGATGCGCAAGTTTCTGGAGGTACTGGGAACCCGCATTGAGCCGTAA

Upstream 100 bases:

>100_bases
GCGGTTTTGTGTGCGGTCATGGATATTGCTCCTGCGCGGCAGGTGCCGCGGTATATATTCTGTGCCGGACACACGCTAGC
CTAACAGCCGCCGGCAGGCA

Downstream 100 bases:

>100_bases
TTTTATTACCGGTAGATAAGAGGCGGGCAGCACGGCTGCCCGCCTTTTCATGTATTCACCTTGACGGAGGCTAGGCTTCG
CCCTCGCCGGGGCCGGAAGC

Product: peptidase C56, PfpI

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQGFYPVHARLYIAPYYVLWQSICNVGYVAAVTAAAVFITCSAMLPAGSGGADLSRKETKMAEKRILMLVGDFVEDYEAM
VPFQMLGMVGHTVHAVCPGKKAGETVKTAVHDFEGDQTYTEKPGHNFMLNCDFDSVDVAHYDALVVPGGRAPEYIRLNAR
VIEIVRQFDKARKPIAAVCHGQQVLVTAGVLQGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPE
WMRKFLEVLGTRIEP

Sequences:

>Translated_255_residues
MQGFYPVHARLYIAPYYVLWQSICNVGYVAAVTAAAVFITCSAMLPAGSGGADLSRKETKMAEKRILMLVGDFVEDYEAM
VPFQMLGMVGHTVHAVCPGKKAGETVKTAVHDFEGDQTYTEKPGHNFMLNCDFDSVDVAHYDALVVPGGRAPEYIRLNAR
VIEIVRQFDKARKPIAAVCHGQQVLVTAGVLQGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPE
WMRKFLEVLGTRIEP
>Mature_255_residues
MQGFYPVHARLYIAPYYVLWQSICNVGYVAAVTAAAVFITCSAMLPAGSGGADLSRKETKMAEKRILMLVGDFVEDYEAM
VPFQMLGMVGHTVHAVCPGKKAGETVKTAVHDFEGDQTYTEKPGHNFMLNCDFDSVDVAHYDALVVPGGRAPEYIRLNAR
VIEIVRQFDKARKPIAAVCHGQQVLVTAGVLQGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPE
WMRKFLEVLGTRIEP

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=187, Percent_Identity=31.5508021390374, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 27712; Mature: 27712

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGFYPVHARLYIAPYYVLWQSICNVGYVAAVTAAAVFITCSAMLPAGSGGADLSRKETK
CCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MAEKRILMLVGDFVEDYEAMVPFQMLGMVGHTVHAVCPGKKAGETVKTAVHDFEGDQTYT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCCC
EKPGHNFMLNCDFDSVDVAHYDALVVPGGRAPEYIRLNARVIEIVRQFDKARKPIAAVCH
CCCCCEEEEECCCCCCCHHHCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHC
GQQVLVTAGVLQGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPE
CCEEEEEEHHHCCCCEEECCCCCCCCHHCCCEEEEECCCCCCCEECCEEEECCCCCCCHH
WMRKFLEVLGTRIEP
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MQGFYPVHARLYIAPYYVLWQSICNVGYVAAVTAAAVFITCSAMLPAGSGGADLSRKETK
CCCCEEEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
MAEKRILMLVGDFVEDYEAMVPFQMLGMVGHTVHAVCPGKKAGETVKTAVHDFEGDQTYT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCCCCCC
EKPGHNFMLNCDFDSVDVAHYDALVVPGGRAPEYIRLNARVIEIVRQFDKARKPIAAVCH
CCCCCEEEEECCCCCCCHHHCCEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHC
GQQVLVTAGVLQGHTCTAYPAVKPDVEAAGATWCEVNDTASNACVSGHVVTAPAWPAHPE
CCEEEEEEHHHCCCCEEECCCCCCCCHHCCCEEEEECCCCCCCEECCEEEECCCCCCCHH
WMRKFLEVLGTRIEP
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]