| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is adhB [H]
Identifier: 78356211
GI number: 78356211
Start: 1186693
End: 1187859
Strand: Direct
Name: adhB [H]
Synonym: Dde_1164
Alternate gene names: 78356211
Gene position: 1186693-1187859 (Clockwise)
Preceding gene: 78356207
Following gene: 78356212
Centisome position: 31.81
GC content: 59.55
Gene sequence:
>1167_bases ATGGTGGATGATTCTTTGTATGCTTTGCGCAAGCTGATTGTGCCCGAAGTGGTCTTCGGTGCCGGAGCGCTCCGTCTGGT GGGTCAGTATGCCGTCAACTTCAACCTGACGCACTGCCTTGTGGTTACCGATGCCGGTGTGGCGTCGGCGGGATGGAGCG GCAGCGTAGTGGATGCTTTGCAGGCTCACGGAGTCAGCTCCACTGTATTCAGCGATATTTCCGCCAATCCCCGCGATACC GAGGTGCGCCAAGGGGTTGCCGTGTACCGCGCGGCAGGGTGTGACGGCATTGTGGCTGTGGGCGGCGGCAGCCCCATGGA CTGCGCCAAAGGGATAGGACTGATGGTTTCCGGCGGCAGAGACGTGCTGGAATACGAAGGCGTGGATAAAGTTGAGGTGC CCGCGCCGCCGCTCATCTGTATTCCCACCACGGCGGGCACCAGTGCCGATGTATCTCAGTTCGCCATTATCAATGACGCA CGACGCAGGTTGAAAATAGCCATTGTCAGCAAATCCGCTGTGCCTGATCTGGCGCTTGTCGATCCTTCCACCACTCTTTC CATGCCGCCGCGGCTCACCGCATCCACCGGCCTTGATGCCTTGTGCCATGCGGTGGAGGCCTATTGTTCCACGGTAAGCT CGCCCATGACTGATCTTTTTGCATTGCGCGCCATGCGGCTTATCGGTGCCAATCTGCAGAAGGTGCTCGACAACCCGCAG GACATGGCCGCGCGGGAAAATATGATGCTGGCATCCATGTATGCGGGGTTTGCATTTTCCAATGCCATACTTGGGGCGGT TCACGCCATGGCGCACGGTCTGGGGGGGCTGCTGGACATGCCGCACGGAGAGTGCAATGCCATTCTGATGCCCCATGTGG TGCGGGCAAACTGTCAGGTTGTTCCCGCCCGCTGCGCCGATATTGCGCAGGAACTGGGGTTTGCCGGTGCGCCGTCCGGT GCGGATGCACTGGGTGATTTTTTACATGACAGGCTGCTCGATATGCGGCGCAGGGCCGGAGTGACGGCAACGCTGGGCAC CATGGGCATGAAGCGTGAAGATATCCCCCCGCTGGCACGTAATGCCATGCACGATGCCTGCATGCTGACCAACCCCCGCA GGTTTACGCTGCAGGAAGTGGAAGCATTGTATCTGGAAGCGTTTTGA
Upstream 100 bases:
>100_bases TTGCGGATGTGCTGAACCTGCTTGTATTTGTCTCTGCGATGCGTAATAGTGGAAGAAGTATATTTTTACGTCTCCACTGC TAACCTCGGGGAGCCTTCGG
Downstream 100 bases:
>100_bases AAATGAAATCAAGGGTGCGGCATGATGCAGGATTCCAGAAAAAAACAGCCCGATCTTCCGCCGGACAGTCAGGGGGGTGA GCACCCGCTCCGTGCCGGAC
Product: alcohol dehydrogenase, iron-containing
Products: NA
Alternate protein names: Alcohol dehydrogenase II; ADH II [H]
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MVDDSLYALRKLIVPEVVFGAGALRLVGQYAVNFNLTHCLVVTDAGVASAGWSGSVVDALQAHGVSSTVFSDISANPRDT EVRQGVAVYRAAGCDGIVAVGGGSPMDCAKGIGLMVSGGRDVLEYEGVDKVEVPAPPLICIPTTAGTSADVSQFAIINDA RRRLKIAIVSKSAVPDLALVDPSTTLSMPPRLTASTGLDALCHAVEAYCSTVSSPMTDLFALRAMRLIGANLQKVLDNPQ DMAARENMMLASMYAGFAFSNAILGAVHAMAHGLGGLLDMPHGECNAILMPHVVRANCQVVPARCADIAQELGFAGAPSG ADALGDFLHDRLLDMRRRAGVTATLGTMGMKREDIPPLARNAMHDACMLTNPRRFTLQEVEALYLEAF
Sequences:
>Translated_388_residues MVDDSLYALRKLIVPEVVFGAGALRLVGQYAVNFNLTHCLVVTDAGVASAGWSGSVVDALQAHGVSSTVFSDISANPRDT EVRQGVAVYRAAGCDGIVAVGGGSPMDCAKGIGLMVSGGRDVLEYEGVDKVEVPAPPLICIPTTAGTSADVSQFAIINDA RRRLKIAIVSKSAVPDLALVDPSTTLSMPPRLTASTGLDALCHAVEAYCSTVSSPMTDLFALRAMRLIGANLQKVLDNPQ DMAARENMMLASMYAGFAFSNAILGAVHAMAHGLGGLLDMPHGECNAILMPHVVRANCQVVPARCADIAQELGFAGAPSG ADALGDFLHDRLLDMRRRAGVTATLGTMGMKREDIPPLARNAMHDACMLTNPRRFTLQEVEALYLEAF >Mature_388_residues MVDDSLYALRKLIVPEVVFGAGALRLVGQYAVNFNLTHCLVVTDAGVASAGWSGSVVDALQAHGVSSTVFSDISANPRDT EVRQGVAVYRAAGCDGIVAVGGGSPMDCAKGIGLMVSGGRDVLEYEGVDKVEVPAPPLICIPTTAGTSADVSQFAIINDA RRRLKIAIVSKSAVPDLALVDPSTTLSMPPRLTASTGLDALCHAVEAYCSTVSSPMTDLFALRAMRLIGANLQKVLDNPQ DMAARENMMLASMYAGFAFSNAILGAVHAMAHGLGGLLDMPHGECNAILMPHVVRANCQVVPARCADIAQELGFAGAPSG ADALGDFLHDRLLDMRRRAGVTATLGTMGMKREDIPPLARNAMHDACMLTNPRRFTLQEVEALYLEAF
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=395, Percent_Identity=29.620253164557, Blast_Score=166, Evalue=2e-41, Organism=Escherichia coli, GI48994951, Length=379, Percent_Identity=40.1055408970976, Blast_Score=281, Evalue=4e-77, Organism=Escherichia coli, GI1789163, Length=385, Percent_Identity=34.025974025974, Blast_Score=231, Evalue=6e-62, Organism=Escherichia coli, GI87082107, Length=384, Percent_Identity=35.6770833333333, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1787493, Length=403, Percent_Identity=29.7766749379653, Blast_Score=177, Evalue=2e-45, Organism=Escherichia coli, GI1789386, Length=266, Percent_Identity=26.6917293233083, Blast_Score=82, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17537053, Length=427, Percent_Identity=28.1030444964871, Blast_Score=140, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6321181, Length=378, Percent_Identity=39.9470899470899, Blast_Score=282, Evalue=5e-77, Organism=Drosophila melanogaster, GI24657991, Length=408, Percent_Identity=28.4313725490196, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 40782; Mature: 40782
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDDSLYALRKLIVPEVVFGAGALRLVGQYAVNFNLTHCLVVTDAGVASAGWSGSVVDAL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEEEEECCCCCCCCCCCHHHHHH QAHGVSSTVFSDISANPRDTEVRQGVAVYRAAGCDGIVAVGGGSPMDCAKGIGLMVSGGR HHCCCCHHHHHHCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCHHHHCCCCEEEECCC DVLEYEGVDKVEVPAPPLICIPTTAGTSADVSQFAIINDARRRLKIAIVSKSAVPDLALV CEEECCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCEEEE DPSTTLSMPPRLTASTGLDALCHAVEAYCSTVSSPMTDLFALRAMRLIGANLQKVLDNPQ CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHH DMAARENMMLASMYAGFAFSNAILGAVHAMAHGLGGLLDMPHGECNAILMPHVVRANCQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCEE VPARCADIAQELGFAGAPSGADALGDFLHDRLLDMRRRAGVTATLGTMGMKREDIPPLAR EHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHH NAMHDACMLTNPRRFTLQEVEALYLEAF HHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVDDSLYALRKLIVPEVVFGAGALRLVGQYAVNFNLTHCLVVTDAGVASAGWSGSVVDAL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCEEEEEEECCCCCCCCCCCHHHHHH QAHGVSSTVFSDISANPRDTEVRQGVAVYRAAGCDGIVAVGGGSPMDCAKGIGLMVSGGR HHCCCCHHHHHHCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCHHHHCCCCEEEECCC DVLEYEGVDKVEVPAPPLICIPTTAGTSADVSQFAIINDARRRLKIAIVSKSAVPDLALV CEEECCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCEEEE DPSTTLSMPPRLTASTGLDALCHAVEAYCSTVSSPMTDLFALRAMRLIGANLQKVLDNPQ CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHH DMAARENMMLASMYAGFAFSNAILGAVHAMAHGLGGLLDMPHGECNAILMPHVVRANCQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHCCCEE VPARCADIAQELGFAGAPSGADALGDFLHDRLLDMRRRAGVTATLGTMGMKREDIPPLAR EHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHH NAMHDACMLTNPRRFTLQEVEALYLEAF HHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3584063; 2308827; 2935393 [H]