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The map label for this gene is slyB [H]

Identifier: 78356197

GI number: 78356197

Start: 1177135

End: 1178046

Strand: Direct

Name: slyB [H]

Synonym: Dde_1150

Alternate gene names: 78356197

Gene position: 1177135-1178046 (Clockwise)

Preceding gene: 78356196

Following gene: 78356198

Centisome position: 31.56

GC content: 63.05

Gene sequence:

>912_bases
GTGGCTGGTGCTGGGGGGGCTGATAGTTTCGTTGCCGCAGACCATGCTGATGCTGACCGGATACAGCTTTCCGGCAGACG
CCTACTGGCAGGCATACGGATTTTGTGTGTATCGTGCCGCTGTGCTGGCGTTTCAGTTTGCCGTGGCCGTGGGACTGTGG
CGCGCGGCATCACCGCAGGGCGTGCCGTGGCCCGACAAGGCCTGGCGTCTGGGGGCGCGGGTGGTCGCGCTGGCCACTGC
GGGGGGCGTTGTGGGTGCAGGGGCGGTGCAGACCGCCGCAAACATTATCGGTATAACTCTTTCGCTGGCCGGCTGACGGC
AGCCCGTATTGACGCTTTGACCCGGGGGGCTTACATACCGGGTAAGCGCGGCTTTGCCGCGAGTGAGTATAATCAGCCTG
AGATCATAACGGGAGACCTTGTCATGATGCATAAAACCGTTGTCCGCCCGGCCCGCAGGCAGGGCGTTGCGGCAGTTGTT
TTTGTGCTGTTGCTGGCAATGCTCGGAGCAGGTTGCTCCAGCCAGAGCGGCAGTGTGTATTCCACCAGCCAGGCGCGCGT
GGTGCACCGTGTAGAATACGGTACCGTAACGGCGGTGCGTCAGGTGCAGATTCAGGGCGAACAGTCCGGACTGGGCGTAC
TGGGCGGTGCCGTAGTGGGCGGCGTGCTGGGCAGCACCATGGGTGCCAGCACCGGACGCACGCTGGCCATATTGGGCGGT
TCGTTGGCCGGAGCCGCTGCCGGTGCCGCGGGTGAACAGGCCCTCAAGGACAAAAACGGTCTGGAACTGACGGTGAAAAT
GGAAGACGGCTCCACCGTTTCCATCGTGCAGGAAGCAGATGAATATTTCGCCGCGGGTGACCGCGTGCGTGTGCTTACGG
CCGGTGACGGTTCCGCCCGTGTGAGACATTAA

Upstream 100 bases:

>100_bases
CGGTTCTCCGGCCGCTTTCACATGATGAGGACACAGGTATGAAAGAGGCATTTCTGCGGGTGTGGCGGGGTGAAGAGACT
CTGTTTATCACTTTCTGGCT

Downstream 100 bases:

>100_bases
CCGTTTTGAGGACGTTGCGCAGGGTGTATTACGGGTTATCGGTACACTGCATGCGGCAGGGCCGTCAGAGCCATCAGAGC
TATTAGAGCTATCAGAACCA

Product: Outer membrane lipoprotein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MAGAGGADSFVAADHADADRIQLSGRRLLAGIRILCVSCRCAGVSVCRGRGTVARGITAGRAVARQGLASGGAGGRAGHC
GGRCGCRGGADRRKHYRYNSFAGRLTAARIDALTRGAYIPGKRGFAASEYNQPEIITGDLVMMHKTVVRPARRQGVAAVV
FVLLLAMLGAGCSSQSGSVYSTSQARVVHRVEYGTVTAVRQVQIQGEQSGLGVLGGAVVGGVLGSTMGASTGRTLAILGG
SLAGAAAGAAGEQALKDKNGLELTVKMEDGSTVSIVQEADEYFAAGDRVRVLTAGDGSARVRH

Sequences:

>Translated_303_residues
MAGAGGADSFVAADHADADRIQLSGRRLLAGIRILCVSCRCAGVSVCRGRGTVARGITAGRAVARQGLASGGAGGRAGHC
GGRCGCRGGADRRKHYRYNSFAGRLTAARIDALTRGAYIPGKRGFAASEYNQPEIITGDLVMMHKTVVRPARRQGVAAVV
FVLLLAMLGAGCSSQSGSVYSTSQARVVHRVEYGTVTAVRQVQIQGEQSGLGVLGGAVVGGVLGSTMGASTGRTLAILGG
SLAGAAAGAAGEQALKDKNGLELTVKMEDGSTVSIVQEADEYFAAGDRVRVLTAGDGSARVRH
>Mature_302_residues
AGAGGADSFVAADHADADRIQLSGRRLLAGIRILCVSCRCAGVSVCRGRGTVARGITAGRAVARQGLASGGAGGRAGHCG
GRCGCRGGADRRKHYRYNSFAGRLTAARIDALTRGAYIPGKRGFAASEYNQPEIITGDLVMMHKTVVRPARRQGVAAVVF
VLLLAMLGAGCSSQSGSVYSTSQARVVHRVEYGTVTAVRQVQIQGEQSGLGVLGGAVVGGVLGSTMGASTGRTLAILGGS
LAGAAAGAAGEQALKDKNGLELTVKMEDGSTVSIVQEADEYFAAGDRVRVLTAGDGSARVRH

Specific function: Unknown

COG id: COG3133

COG function: function code M; Outer membrane lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pcp/slyB lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI48994887, Length=143, Percent_Identity=41.2587412587413, Blast_Score=88, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 30803; Mature: 30671

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAGGADSFVAADHADADRIQLSGRRLLAGIRILCVSCRCAGVSVCRGRGTVARGITAG
CCCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCHHH
RAVARQGLASGGAGGRAGHCGGRCGCRGGADRRKHYRYNSFAGRLTAARIDALTRGAYIP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
GKRGFAASEYNQPEIITGDLVMMHKTVVRPARRQGVAAVVFVLLLAMLGAGCSSQSGSVY
CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE
STSQARVVHRVEYGTVTAVRQVQIQGEQSGLGVLGGAVVGGVLGSTMGASTGRTLAILGG
ECCHHEEEEEECCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECC
SLAGAAAGAAGEQALKDKNGLELTVKMEDGSTVSIVQEADEYFAAGDRVRVLTAGDGSAR
CHHHHHCCCCCHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCC
VRH
CCC
>Mature Secondary Structure 
AGAGGADSFVAADHADADRIQLSGRRLLAGIRILCVSCRCAGVSVCRGRGTVARGITAG
CCCCCCCCCEECCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCHHH
RAVARQGLASGGAGGRAGHCGGRCGCRGGADRRKHYRYNSFAGRLTAARIDALTRGAYIP
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
GKRGFAASEYNQPEIITGDLVMMHKTVVRPARRQGVAAVVFVLLLAMLGAGCSSQSGSVY
CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE
STSQARVVHRVEYGTVTAVRQVQIQGEQSGLGVLGGAVVGGVLGSTMGASTGRTLAILGG
ECCHHEEEEEECCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCEEEEECC
SLAGAAAGAAGEQALKDKNGLELTVKMEDGSTVSIVQEADEYFAAGDRVRVLTAGDGSAR
CHHHHHCCCCCHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHCCCEEEEEEECCCCCC
VRH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]