| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356193
Identifier: 78356193
GI number: 78356193
Start: 1171571
End: 1172455
Strand: Direct
Name: 78356193
Synonym: Dde_1146
Alternate gene names: NA
Gene position: 1171571-1172455 (Clockwise)
Preceding gene: 78356192
Following gene: 78356196
Centisome position: 31.41
GC content: 56.95
Gene sequence:
>885_bases ATGCAGGAAGGAAAAGGAATCGGTTATGTGGCTGCTTTTGCAGCCATTGTGTTGTGGTCTGGCAACTTTGTCGTGGCCAG ACTGCTTAACGAGGCGCTTTCCCCTTTGGCGACTTCGTTCTGGCGCTGGGGTATTGCCAGCGCTGCGCTGCTGCCGCTGG GCTGGAGTGCGTTCCGCCGTGACTGGCCGGCCATTGTGGCGCATAAATGGTATTTTCTGCTTACGGCGTTTGTGGGCATA ACCATTTTCAATACCATGGTGTATATGGCCGGACGTACCTCTGCGGCGGTCAACCTGTCGCTTATAGCCACGTCATCGCC TGTGTTCATGTTTCTGTTTGCCAGAATTTTTCTGGGCGAGGCGATCAGCCCCCGTCGTGTGGCCGGGCTTGTGGTGGCGC TTTGCGGGGTGCTGGTACTTATTTCACGCGGGCACGTTCAGGCTCTGCTTCAGCTTGAATTCACTCAGGGCGATTTGTGG ATGCTGCTGGCAGCTGTATGTTTTGCCGTGTATTCCGTGCTTGCCCGTCAGCGGCCGCAGGGGGTTTCGCAGAGCGCTTT TCTGGTAGCCACATTTATTCCCGGACTGATCATGCTTACACCTGCCTATGTGGCAGATGCCTGGACAGGGCCGGCCGTGC AGTTCACACCTCTGGTGGTCGGCTGCCTGCTGTACATAGGGTTAGGGGCTTCGCTCACCGCCTATTTCCTCTGGAACAAG GCCGTCGGCATTCTCGGTTCTTCCCTTGCGGGTGTGCTGTATTACTCGATACCTGTTTTTGCCGGACTGGCAGCGTATCT GCTGCTGGGTGAGCCGGTAGGGTTCATACATCTTGCCAGCGGGCTGCTGGTTATCGGCGGTATTCTGCTGGCGACCAGAG GCTGA
Upstream 100 bases:
>100_bases TCTGTTGACAGTAAAGGCACCTCGGCCGAGTATCCGCGTTCCGGTATGCGGGGGAAAGCTGCCATTATGCATACCGGTAA TTATTTGCAGGAGTGCGTGC
Downstream 100 bases:
>100_bases ACCTGACGCGCGGCACTGTCACCGGACGGGCGCAGCAGACAACAGATGTCTGCCTGCCTGCGGCCACAGTGCCTGCATTG GTTCAACCACCTTGGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG
Sequences:
>Translated_294_residues MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG >Mature_294_residues MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31367; Mature: 31367
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRR CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC DWPAIVAHKWYFLLTAFVGITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCC AISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLWMLLAAVCFAVYSVLARQRPQ CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCC GVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRR CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC DWPAIVAHKWYFLLTAFVGITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCC AISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLWMLLAAVCFAVYSVLARQRPQ CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCC GVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]