Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78356193

Identifier: 78356193

GI number: 78356193

Start: 1171571

End: 1172455

Strand: Direct

Name: 78356193

Synonym: Dde_1146

Alternate gene names: NA

Gene position: 1171571-1172455 (Clockwise)

Preceding gene: 78356192

Following gene: 78356196

Centisome position: 31.41

GC content: 56.95

Gene sequence:

>885_bases
ATGCAGGAAGGAAAAGGAATCGGTTATGTGGCTGCTTTTGCAGCCATTGTGTTGTGGTCTGGCAACTTTGTCGTGGCCAG
ACTGCTTAACGAGGCGCTTTCCCCTTTGGCGACTTCGTTCTGGCGCTGGGGTATTGCCAGCGCTGCGCTGCTGCCGCTGG
GCTGGAGTGCGTTCCGCCGTGACTGGCCGGCCATTGTGGCGCATAAATGGTATTTTCTGCTTACGGCGTTTGTGGGCATA
ACCATTTTCAATACCATGGTGTATATGGCCGGACGTACCTCTGCGGCGGTCAACCTGTCGCTTATAGCCACGTCATCGCC
TGTGTTCATGTTTCTGTTTGCCAGAATTTTTCTGGGCGAGGCGATCAGCCCCCGTCGTGTGGCCGGGCTTGTGGTGGCGC
TTTGCGGGGTGCTGGTACTTATTTCACGCGGGCACGTTCAGGCTCTGCTTCAGCTTGAATTCACTCAGGGCGATTTGTGG
ATGCTGCTGGCAGCTGTATGTTTTGCCGTGTATTCCGTGCTTGCCCGTCAGCGGCCGCAGGGGGTTTCGCAGAGCGCTTT
TCTGGTAGCCACATTTATTCCCGGACTGATCATGCTTACACCTGCCTATGTGGCAGATGCCTGGACAGGGCCGGCCGTGC
AGTTCACACCTCTGGTGGTCGGCTGCCTGCTGTACATAGGGTTAGGGGCTTCGCTCACCGCCTATTTCCTCTGGAACAAG
GCCGTCGGCATTCTCGGTTCTTCCCTTGCGGGTGTGCTGTATTACTCGATACCTGTTTTTGCCGGACTGGCAGCGTATCT
GCTGCTGGGTGAGCCGGTAGGGTTCATACATCTTGCCAGCGGGCTGCTGGTTATCGGCGGTATTCTGCTGGCGACCAGAG
GCTGA

Upstream 100 bases:

>100_bases
TCTGTTGACAGTAAAGGCACCTCGGCCGAGTATCCGCGTTCCGGTATGCGGGGGAAAGCTGCCATTATGCATACCGGTAA
TTATTTGCAGGAGTGCGTGC

Downstream 100 bases:

>100_bases
ACCTGACGCGCGGCACTGTCACCGGACGGGCGCAGCAGACAACAGATGTCTGCCTGCCTGCGGCCACAGTGCCTGCATTG
GTTCAACCACCTTGGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI
TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW
MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK
AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG

Sequences:

>Translated_294_residues
MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI
TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW
MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK
AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG
>Mature_294_residues
MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRRDWPAIVAHKWYFLLTAFVGI
TIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGEAISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLW
MLLAAVCFAVYSVLARQRPQGVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK
AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31367; Mature: 31367

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRR
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
DWPAIVAHKWYFLLTAFVGITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCC
AISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLWMLLAAVCFAVYSVLARQRPQ
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
GVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQEGKGIGYVAAFAAIVLWSGNFVVARLLNEALSPLATSFWRWGIASAALLPLGWSAFRR
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
DWPAIVAHKWYFLLTAFVGITIFNTMVYMAGRTSAAVNLSLIATSSPVFMFLFARIFLGE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHCC
AISPRRVAGLVVALCGVLVLISRGHVQALLQLEFTQGDLWMLLAAVCFAVYSVLARQRPQ
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
GVSQSAFLVATFIPGLIMLTPAYVADAWTGPAVQFTPLVVGCLLYIGLGASLTAYFLWNK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
AVGILGSSLAGVLYYSIPVFAGLAAYLLLGEPVGFIHLASGLLVIGGILLATRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]