| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78356190
Identifier: 78356190
GI number: 78356190
Start: 1170234
End: 1170581
Strand: Direct
Name: 78356190
Synonym: Dde_1143
Alternate gene names: NA
Gene position: 1170234-1170581 (Clockwise)
Preceding gene: 78356188
Following gene: 78356191
Centisome position: 31.37
GC content: 55.17
Gene sequence:
>348_bases ATGAGTGAACTGGCTCGCTTCGGCAATCTTGATATCGACTGGAACCTGAGTCCCGAACATGCGGTGACCATGTATCTGGA ATGGGGCAACAACGACTGGCACGCGGAGTATCCGCCTGTGCGCTCCAAGGATGATGTTTCCACTTATTTTGTGGTGGATA CCTGGGGGGCCAGACCGGTTGTGCGGCTTGTGCGCAGAAATTCGGAACAAGCGGAAGAACTGGCCACTATCGAGCTGCCC GACCATCTGGCAAACAGATGGCTGCATGAGCATGGCGACCTCAAAGGCATCTGCGAGCCCACCGAAGAGATCAAGGCCTG GCTTAAAAAAGAGCTGGGCCACGAATAG
Upstream 100 bases:
>100_bases GGCAGTCCGCCCTGCCTACCTTCACAAGGCATCGCGACGGAACGGGTGTGGCAGCCCGTTCCGCCGCGGATACAGAATGA GAGTATACGGAGGGCTACAC
Downstream 100 bases:
>100_bases ATAGTTTCCTGAAGAAACGCATACCGTTCTTCACCACTCCTTGGACCTTGGTACCCGAGTCTGGAAGGCGGCATCTTATG GGGAGATGCTGCCTTCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSELARFGNLDIDWNLSPEHAVTMYLEWGNNDWHAEYPPVRSKDDVSTYFVVDTWGARPVVRLVRRNSEQAEELATIELP DHLANRWLHEHGDLKGICEPTEEIKAWLKKELGHE
Sequences:
>Translated_115_residues MSELARFGNLDIDWNLSPEHAVTMYLEWGNNDWHAEYPPVRSKDDVSTYFVVDTWGARPVVRLVRRNSEQAEELATIELP DHLANRWLHEHGDLKGICEPTEEIKAWLKKELGHE >Mature_114_residues SELARFGNLDIDWNLSPEHAVTMYLEWGNNDWHAEYPPVRSKDDVSTYFVVDTWGARPVVRLVRRNSEQAEELATIELPD HLANRWLHEHGDLKGICEPTEEIKAWLKKELGHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13421; Mature: 13290
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELARFGNLDIDWNLSPEHAVTMYLEWGNNDWHAEYPPVRSKDDVSTYFVVDTWGARPV CCCHHHHCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH VRLVRRNSEQAEELATIELPDHLANRWLHEHGDLKGICEPTEEIKAWLKKELGHE HHHHHCCCHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SELARFGNLDIDWNLSPEHAVTMYLEWGNNDWHAEYPPVRSKDDVSTYFVVDTWGARPV CCHHHHCCCCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCHHH VRLVRRNSEQAEELATIELPDHLANRWLHEHGDLKGICEPTEEIKAWLKKELGHE HHHHHCCCHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA