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The map label for this gene is glcF [C]

Identifier: 78356132

GI number: 78356132

Start: 1115406

End: 1116632

Strand: Reverse

Name: glcF [C]

Synonym: Dde_1085

Alternate gene names: 78356132

Gene position: 1116632-1115406 (Counterclockwise)

Preceding gene: 78356133

Following gene: 78356130

Centisome position: 29.93

GC content: 65.53

Gene sequence:

>1227_bases
ATGTCACACCCCCATCCCGCCCGGGACTGCATCCTCTGCGGACGCTGTCTTGATGTCTGTCCCGTTTTTCTTGCTTCCGG
CAAGGAAGAGCTTTCGCCCAAAGCCAAACATCAGCTTATGGCCGCGCTGCGCAGCAACCCGCAACTGCTCGAAGCCCTGC
CGGCGCGTCTGCTGGCAGACAAATGCGTTTCGTGCGGCCGCTGCGAAAAAGCCTGTCCTCAGGGCCTTTCCGTACCCGCG
GCACTGGGCGCCCTGCGTGCCGAACATGCAGGATGGCCACAGTGGCTGTGGCAACGCTGGATAAACGGCGGTAACATTCT
GTGGCCGGCCATGGCCACGCTGGGACGCATGGCCCCCCGACTGCCGGCCCCGGCGGCCGCACGCCCGTTGATGGAAAAAC
TGGCGGCCATGCACGACACCCCGCCGCAACCCTGGTTCCGCATGGCGGCTCCCGCGGCCGGAACACAGCCGCCCCTGCGG
CCGGTCATGCTGTTTTCCGGCTGTACCGCGCGGCGTATACGTCCGCGCTGGAGCAGCAAAGCAACCGCCCTGCTGGAACT
GGCCGGTATACGTCCGCAGCCGGAGACCGCTTTCACCTGCTGCGGTGCCACACTGGAACACGCCGGCCTGCCCGATGCCG
CGCGGCAGGCCCGTCATGCCAATATAACGGCTTGGCACAACGCGGACAGGCCGCTGCTTGTCACATTTTGCGCCACCTGT
GCCCACGGTCTGCACGGGTATGCCCGGCATGACGAGCTGTGGCACGAAACACCGCCGGATTCAGCCACCCTATGGACACA
GTCCGTGGTGCCGCTGTCCGTTTTTCTGCAAAAATTTCCGGTGCAGGTGCTGGATACCGCTCCGGAATGGTTCCGTTATC
ACCAGCCATGCCACGCCCCCGCACAACACGACCCCGATGCGGCCCTGCTGTACGCCATGGCCGCGCAAACGCCTGCCGCA
GCAGCGCACGGCAGACGGATACGTCCGGCGGGCATGACCACACGCCAGTGCTGCGGTATGGGCGGAGTAATGCAGCTTGC
CGCCCCTTCGCTGTGCGGCATGGTCAATGCAGCCTGCTGGCAGGCGCTGGACAGCCTGTGCCCCGCGCAGGACAACGCCT
GCCCTCCGCCGGTGGTAACGGGATGCTCCGGCTGTACCCTGCAGCTGAGCGGTACCGCGCCGGAACATGTCGCCGTACAT
CACTGGCTTGATGTCCTGACGGTCTGA

Upstream 100 bases:

>100_bases
CGGAGGACATTCTCTTTGCCCGCTCGGCGGACAATCCCGGCGTCCGGCGGCTGGTCACCGAACTGAACAACGCCACATAC
GGTCTGGATACCCCACAGTA

Downstream 100 bases:

>100_bases
AAGGCTGCGGTCCGCTTGCCGCAGCACCGCACCGGCAGACCCTGAAAACGTGACGGCGAAGTCCGGAGATAGTTCCGCAA
CCGCCTGCCCGCCCGCTGCC

Product: glycolate oxidase, iron-sulfur subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAALRSNPQLLEALPARLLADKCVSCGRCEKACPQGLSVPA
ALGALRAEHAGWPQWLWQRWINGGNILWPAMATLGRMAPRLPAPAAARPLMEKLAAMHDTPPQPWFRMAAPAAGTQPPLR
PVMLFSGCTARRIRPRWSSKATALLELAGIRPQPETAFTCCGATLEHAGLPDAARQARHANITAWHNADRPLLVTFCATC
AHGLHGYARHDELWHETPPDSATLWTQSVVPLSVFLQKFPVQVLDTAPEWFRYHQPCHAPAQHDPDAALLYAMAAQTPAA
AAHGRRIRPAGMTTRQCCGMGGVMQLAAPSLCGMVNAACWQALDSLCPAQDNACPPPVVTGCSGCTLQLSGTAPEHVAVH
HWLDVLTV

Sequences:

>Translated_408_residues
MSHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAALRSNPQLLEALPARLLADKCVSCGRCEKACPQGLSVPA
ALGALRAEHAGWPQWLWQRWINGGNILWPAMATLGRMAPRLPAPAAARPLMEKLAAMHDTPPQPWFRMAAPAAGTQPPLR
PVMLFSGCTARRIRPRWSSKATALLELAGIRPQPETAFTCCGATLEHAGLPDAARQARHANITAWHNADRPLLVTFCATC
AHGLHGYARHDELWHETPPDSATLWTQSVVPLSVFLQKFPVQVLDTAPEWFRYHQPCHAPAQHDPDAALLYAMAAQTPAA
AAHGRRIRPAGMTTRQCCGMGGVMQLAAPSLCGMVNAACWQALDSLCPAQDNACPPPVVTGCSGCTLQLSGTAPEHVAVH
HWLDVLTV
>Mature_407_residues
SHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAALRSNPQLLEALPARLLADKCVSCGRCEKACPQGLSVPAA
LGALRAEHAGWPQWLWQRWINGGNILWPAMATLGRMAPRLPAPAAARPLMEKLAAMHDTPPQPWFRMAAPAAGTQPPLRP
VMLFSGCTARRIRPRWSSKATALLELAGIRPQPETAFTCCGATLEHAGLPDAARQARHANITAWHNADRPLLVTFCATCA
HGLHGYARHDELWHETPPDSATLWTQSVVPLSVFLQKFPVQVLDTAPEWFRYHQPCHAPAQHDPDAALLYAMAAQTPAAA
AHGRRIRPAGMTTRQCCGMGGVMQLAAPSLCGMVNAACWQALDSLCPAQDNACPPPVVTGCSGCTLQLSGTAPEHVAVHH
WLDVLTV

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44005; Mature: 43874

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAALRSNPQLLEALPARLLAD
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KCVSCGRCEKACPQGLSVPAALGALRAEHAGWPQWLWQRWINGGNILWPAMATLGRMAPR
HHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LPAPAAARPLMEKLAAMHDTPPQPWFRMAAPAAGTQPPLRPVMLFSGCTARRIRPRWSSK
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHH
ATALLELAGIRPQPETAFTCCGATLEHAGLPDAARQARHANITAWHNADRPLLVTFCATC
HHHHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHH
AHGLHGYARHDELWHETPPDSATLWTQSVVPLSVFLQKFPVQVLDTAPEWFRYHQPCHAP
HHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCCCCC
AQHDPDAALLYAMAAQTPAAAAHGRRIRPAGMTTRQCCGMGGVMQLAAPSLCGMVNAACW
CCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
QALDSLCPAQDNACPPPVVTGCSGCTLQLSGTAPEHVAVHHWLDVLTV
HHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHPHPARDCILCGRCLDVCPVFLASGKEELSPKAKHQLMAALRSNPQLLEALPARLLAD
CCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
KCVSCGRCEKACPQGLSVPAALGALRAEHAGWPQWLWQRWINGGNILWPAMATLGRMAPR
HHHCCCCHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCC
LPAPAAARPLMEKLAAMHDTPPQPWFRMAAPAAGTQPPLRPVMLFSGCTARRIRPRWSSK
CCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCHH
ATALLELAGIRPQPETAFTCCGATLEHAGLPDAARQARHANITAWHNADRPLLVTFCATC
HHHHHHHHCCCCCCCHHHHHHCCHHHHCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHHH
AHGLHGYARHDELWHETPPDSATLWTQSVVPLSVFLQKFPVQVLDTAPEWFRYHQPCHAP
HHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHHHHCCCCCCC
AQHDPDAALLYAMAAQTPAAAAHGRRIRPAGMTTRQCCGMGGVMQLAAPSLCGMVNAACW
CCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHH
QALDSLCPAQDNACPPPVVTGCSGCTLQLSGTAPEHVAVHHWLDVLTV
HHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA