| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is pstS [H]
Identifier: 78356109
GI number: 78356109
Start: 1088768
End: 1089571
Strand: Reverse
Name: pstS [H]
Synonym: Dde_1062
Alternate gene names: 78356109
Gene position: 1089571-1088768 (Counterclockwise)
Preceding gene: 78356114
Following gene: 78356108
Centisome position: 29.21
GC content: 57.21
Gene sequence:
>804_bases ATGAAACATCTTGCCATCGTCGCCGCCCTGGTGCTCGGCCTCACTTCTTCCGCTTTTGCCGGACAGAAGATCAAAATCGC CGGTTCCACAACCATTCTGCCCATCATGCAGCGTGTGGTTGAAGCATACATGAAAGCCAACCCCGATGTGGAAATCGCAG TTTCCGGCGGCGGTTCTTCCAACGGCATCAAAGCGCTGCTGGACGGCACCACCGACATCGCCATGGCATCGCGCACCATG AAAGACAAAGAAATCAAAATGGCCGCCGAAAAAGGCATGAACCCCAAGCAGGTTGTCATCGCCCTTGATGCCGTGATTCC CATTGTCAACAAAAGCAACCCCGTCAACGACCTGACCATTGACCAGCTGCAGGCCATCTATGCAGGCAAGGTCACCAACT GGAAAGAAGTCGGCGGCAAAGACGAAGGCATTGTGGTGGTTTCGCGCGACACGTCTTCCGGCACCTACGAGACCTGGAGC CACTTTGTAATGGGTAAAACCCGCGTGTTCCCCGGTGCGCTTCTGCAGGCATCTTCCGGCGCAGTGCTGCAGGCCGTGGC CAAAAACCCCCGCGCCATCAGCTACGACGGCATCGGCTACGTTGACAACTCGGTCAAGCCGCTGACCGTGAACGGTGTGG AAGGCAACGCAACCACCGCCAAGGACAAAAGCTTCCCCGTCGCCCGCACCCTGCAGGTATATGTAGACGGCAGCGTTTCC GGTGCGGCCAAGGGCCTTATCGACTTCATCCTGTCGCCCGAAGGCCAGAACATTGTGGAAGAAGCCGGCTTCATCAAGCT GTAA
Upstream 100 bases:
>100_bases AACAAAAGACACCTAGGTTACCCACACGCCGGACGGATACAGGTACGGCGCATACAACAACAAACAAGTCATCAACCACA TCGGAGGAAAACCCATGCGT
Downstream 100 bases:
>100_bases CATTCTTCCTCTACACTCCGTCCCTGAAGAACAACGCGGCCAGGCCCCTGCCGGATACGGCACGGGGCCTGCCGTGCAAC CAAGCCCAAGGCGGACAGAC
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKHLAIVAALVLGLTSSAFAGQKIKIAGSTTILPIMQRVVEAYMKANPDVEIAVSGGGSSNGIKALLDGTTDIAMASRTM KDKEIKMAAEKGMNPKQVVIALDAVIPIVNKSNPVNDLTIDQLQAIYAGKVTNWKEVGGKDEGIVVVSRDTSSGTYETWS HFVMGKTRVFPGALLQASSGAVLQAVAKNPRAISYDGIGYVDNSVKPLTVNGVEGNATTAKDKSFPVARTLQVYVDGSVS GAAKGLIDFILSPEGQNIVEEAGFIKL
Sequences:
>Translated_267_residues MKHLAIVAALVLGLTSSAFAGQKIKIAGSTTILPIMQRVVEAYMKANPDVEIAVSGGGSSNGIKALLDGTTDIAMASRTM KDKEIKMAAEKGMNPKQVVIALDAVIPIVNKSNPVNDLTIDQLQAIYAGKVTNWKEVGGKDEGIVVVSRDTSSGTYETWS HFVMGKTRVFPGALLQASSGAVLQAVAKNPRAISYDGIGYVDNSVKPLTVNGVEGNATTAKDKSFPVARTLQVYVDGSVS GAAKGLIDFILSPEGQNIVEEAGFIKL >Mature_267_residues MKHLAIVAALVLGLTSSAFAGQKIKIAGSTTILPIMQRVVEAYMKANPDVEIAVSGGGSSNGIKALLDGTTDIAMASRTM KDKEIKMAAEKGMNPKQVVIALDAVIPIVNKSNPVNDLTIDQLQAIYAGKVTNWKEVGGKDEGIVVVSRDTSSGTYETWS HFVMGKTRVFPGALLQASSGAVLQAVAKNPRAISYDGIGYVDNSVKPLTVNGVEGNATTAKDKSFPVARTLQVYVDGSVS GAAKGLIDFILSPEGQNIVEEAGFIKL
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27994; Mature: 27994
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLAIVAALVLGLTSSAFAGQKIKIAGSTTILPIMQRVVEAYMKANPDVEIAVSGGGSS CCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC NGIKALLDGTTDIAMASRTMKDKEIKMAAEKGMNPKQVVIALDAVIPIVNKSNPVNDLTI CCEEEEECCCCHHHHHHHHCCHHHHHHHHHCCCCHHHEEEEEEHHEEECCCCCCCCCCCH DQLQAIYAGKVTNWKEVGGKDEGIVVVSRDTSSGTYETWSHFVMGKTRVFPGALLQASSG HHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCCC AVLQAVAKNPRAISYDGIGYVDNSVKPLTVNGVEGNATTAKDKSFPVARTLQVYVDGSVS HHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC GAAKGLIDFILSPEGQNIVEEAGFIKL HHHHHHHHHHCCCCCCHHHHHCCCCCC >Mature Secondary Structure MKHLAIVAALVLGLTSSAFAGQKIKIAGSTTILPIMQRVVEAYMKANPDVEIAVSGGGSS CCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC NGIKALLDGTTDIAMASRTMKDKEIKMAAEKGMNPKQVVIALDAVIPIVNKSNPVNDLTI CCEEEEECCCCHHHHHHHHCCHHHHHHHHHCCCCHHHEEEEEEHHEEECCCCCCCCCCCH DQLQAIYAGKVTNWKEVGGKDEGIVVVSRDTSSGTYETWSHFVMGKTRVFPGALLQASSG HHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEECCCC AVLQAVAKNPRAISYDGIGYVDNSVKPLTVNGVEGNATTAKDKSFPVARTLQVYVDGSVS HHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCC GAAKGLIDFILSPEGQNIVEEAGFIKL HHHHHHHHHHCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA