| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is ylaK [H]
Identifier: 78356106
GI number: 78356106
Start: 1085522
End: 1086712
Strand: Reverse
Name: ylaK [H]
Synonym: Dde_1059
Alternate gene names: 78356106
Gene position: 1086712-1085522 (Counterclockwise)
Preceding gene: 78356107
Following gene: 78356105
Centisome position: 29.13
GC content: 54.07
Gene sequence:
>1191_bases ATGGGCAGCAAAAACTTTGTGCTGGATACCAACGTTCTTATTGAAAGTCCGGAAAGCATTCTGAGCCTGCGCAACGGAGA AGAAAACAACATCTTCATCCCCTACCATGTACTGCTGGAACTCAACTCGCTGAAAACAAACCCCAGACTGCGGCACATAG TGGCCCGCGTGGTGGACGTGCTGCTGGAACACCGCGACATAATCAAGTTCATCCGCAATGACTCAAGCGTGTCTCCCTTT ACCGAAGAGGTGGTGGACAATTTTATTCTGCGTGAAGTGCACGATGCAGACATTGAAGACCCCATTCTGGTCACCAACGA CAGAATACTGCAGCTTCAGGCAGGCATGGGTGGCATACGCTGTGAAGAATACAGAGATTCCCGCCCGTTCCAGTCTGAAT CACAGCAGTTCACCGGTTTTACCGCCGAAGGGGAACCGCCGGTGCCCAACGCCTTCCGCTGGGAAGAAGGCCGACCGGTC TTCAACGGGCCGGACGGCGACGAGGTGATAAGCTACATGCAGGACGTATGGCAGGTGCGTCCCCGCAGCGTATACCAGAA TCTGGCGCTGATGCTTATGCTGCACGACAGAATAGACCTTGTTTCCGTGCAGTCCGAGGCAGGATACGGCAAAACATATC TGGCGCTGGCATCGGCGCTGCATCTGGTATTGCAGCATCACCGCTACAACAAGATATATGTGGTCAAACCCACCATAGAG CTGGGCGCCAAAATGGGTTTTCTACCCGGTGACATCCGTGAAAAAATGGAGCCGTACATCAGATACATCGGCGACCTGCT GCTCAAGCTGCACGGCGTACGCCCCGCCAACAGGCTGTTTCTCAATGCGGGCGAAGCCCCCCTGCGCTTTGACCCCAAGC GGTTTGAGATACTGCCGCTGGCCTATATCCGCGGTATGAACATAGAAAACGCAGTGGTCATCATAGATGAAACCCAGAAT CTTTCGCGGTCTGAAGTACGCGCCCTGCTGACCCGTATGGGCGGAAACGTCAAATGCCTGTGCCTCGGGGACACCAGACA GGTGGACAACCCGTACCTGAACGAATCAAACAACGGGCTCAACTGGATTGTGCGTAAATTCAAGGGATACTCCAACTACG CTCACATGGTGCTGAAAGGAGAGCGTTCGCGCGGGCCCATCACCGACATGGTCATAAAATCCAAGCTGTAA
Upstream 100 bases:
>100_bases TAGACAGCACGCACACCGCTTTATCAGGGCGGCGGCACCCGCCGCCGCCCTTTTTCATCAACAGGAACCGGCCGCAACAG CCGACCCGCAAGGGGGAATG
Downstream 100 bases:
>100_bases CACCTGCCCGTGCTGCGGCGCAGCTGACCTTCCGGCCCCGCATGGTGCGCACACCGTGCGGGGTATAATTTTCTTCTCCG GGCGCACTTTGCCCTGTCCG
Product: PhoH-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRLRHIVARVVDVLLEHRDIIKFIRNDSSVSPF TEEVVDNFILREVHDADIEDPILVTNDRILQLQAGMGGIRCEEYRDSRPFQSESQQFTGFTAEGEPPVPNAFRWEEGRPV FNGPDGDEVISYMQDVWQVRPRSVYQNLALMLMLHDRIDLVSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIE LGAKMGFLPGDIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPLAYIRGMNIENAVVIIDETQN LSRSEVRALLTRMGGNVKCLCLGDTRQVDNPYLNESNNGLNWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL
Sequences:
>Translated_396_residues MGSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRLRHIVARVVDVLLEHRDIIKFIRNDSSVSPF TEEVVDNFILREVHDADIEDPILVTNDRILQLQAGMGGIRCEEYRDSRPFQSESQQFTGFTAEGEPPVPNAFRWEEGRPV FNGPDGDEVISYMQDVWQVRPRSVYQNLALMLMLHDRIDLVSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIE LGAKMGFLPGDIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPLAYIRGMNIENAVVIIDETQN LSRSEVRALLTRMGGNVKCLCLGDTRQVDNPYLNESNNGLNWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL >Mature_395_residues GSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRLRHIVARVVDVLLEHRDIIKFIRNDSSVSPFT EEVVDNFILREVHDADIEDPILVTNDRILQLQAGMGGIRCEEYRDSRPFQSESQQFTGFTAEGEPPVPNAFRWEEGRPVF NGPDGDEVISYMQDVWQVRPRSVYQNLALMLMLHDRIDLVSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIEL GAKMGFLPGDIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPLAYIRGMNIENAVVIIDETQNL SRSEVRALLTRMGGNVKCLCLGDTRQVDNPYLNESNNGLNWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=152, Percent_Identity=38.8157894736842, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI145693103, Length=145, Percent_Identity=36.551724137931, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 45231; Mature: 45099
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRLRHIVARVVDV CCCCCEEEECCCEEECCHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHH LLEHRDIIKFIRNDSSVSPFTEEVVDNFILREVHDADIEDPILVTNDRILQLQAGMGGIR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCE CEEYRDSRPFQSESQQFTGFTAEGEPPVPNAFRWEEGRPVFNGPDGDEVISYMQDVWQVR EHHHCCCCCCCCCCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC PRSVYQNLALMLMLHDRIDLVSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIE HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHH LGAKMGFLPGDIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEE AYIRGMNIENAVVIIDETQNLSRSEVRALLTRMGGNVKCLCLGDTRQVDNPYLNESNNGL HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCH NWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCC >Mature Secondary Structure GSKNFVLDTNVLIESPESILSLRNGEENNIFIPYHVLLELNSLKTNPRLRHIVARVVDV CCCCEEEECCCEEECCHHHHHHCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHH LLEHRDIIKFIRNDSSVSPFTEEVVDNFILREVHDADIEDPILVTNDRILQLQAGMGGIR HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEECCCCCCE CEEYRDSRPFQSESQQFTGFTAEGEPPVPNAFRWEEGRPVFNGPDGDEVISYMQDVWQVR EHHHCCCCCCCCCCCHHCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC PRSVYQNLALMLMLHDRIDLVSVQSEAGYGKTYLALASALHLVLQHHRYNKIYVVKPTIE HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHH LGAKMGFLPGDIREKMEPYIRYIGDLLLKLHGVRPANRLFLNAGEAPLRFDPKRFEILPL HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCEEEEEE AYIRGMNIENAVVIIDETQNLSRSEVRALLTRMGGNVKCLCLGDTRQVDNPYLNESNNGL HHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCH NWIVRKFKGYSNYAHMVLKGERSRGPITDMVIKSKL HHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]