| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is treZ [H]
Identifier: 78356046
GI number: 78356046
Start: 1024300
End: 1026375
Strand: Reverse
Name: treZ [H]
Synonym: Dde_0999
Alternate gene names: 78356046
Gene position: 1026375-1024300 (Counterclockwise)
Preceding gene: 78356049
Following gene: 78356043
Centisome position: 27.52
GC content: 63.82
Gene sequence:
>2076_bases ATGTACCGCCACATGTGCCACAGGGCGGCATACGGTTCAAGCGGACGGCAGCCGCGCAGGCACATTGACTTTACCGGCCG CTGCCCGCATTCTGCGGTAATGCATACTCTCTTTGTACCGGCCCACGGGCCGCGCCGCCTGCCGGACGGCAGCTGGCTCT TCCGGCTGTGGACCACACGCCGCAAGCCCGCAGTACTTGTCATCGAAGCGCCCTGCCCGCAGGAAATTCCCATGAAAGCG TGCGGAGGCGGCTGGCGGGAAGCCAGAACAGCCCCCATGCCCGCCGGTGCGCTCTACCGCATCCGGCTGGGGGACGAGCT GCTGGCAGACCCGGCTTCCGCCCATCAGCCGCAAGGTATTGACGGCCCTTCCATGACGGACGACCCGGCCGCTTTCATCT GGACCGACAGCGGTTTCGGTGCGGTAGCCATGCCTCACGCGGTCATCTACGAAATACATACCGGCACGTTCACCCCCGAA GGTACACTGGATGCCGCCGCCGGACGCCTGCCCCGCATTGCTGAACTGGGCGTGACCGCCGTGGAACTGATGCCCCTGAC GGAAACCACCGGACGCTGGAACTGGGGCTATGACGGTGTGTTTCCCTACAGTATCCATCACCGTGCGGGCGGTCCCGATG CACTGCGCCGCTTTGTGGATACGGCCCACGGGCTGGGTCTTTCAGTGTATGGCGACGTGGTGCTCAATCATCTGGGACCG GAGGGAAACAACCTGCCGAAATTCGGCCCCTACCTTTCCCGCCGGCACCACACTCCGTGGGGGGCCTGCCCTTCATTTGA CGGAGCATCCGCTCAGGCCGTACGCCGTTATTTTCTGGACTGCTGTCTCAGACTCATGGCGCATTTTCATATGGACGGGC TGCGGCTGGACGCCACCCCGTATGTGCAGGACGATTCCGCAGAGCATATTCTCGCCGCACTCACGCGGGAAACGCAGGTG CTGGCCGCCGCCTCAGGCAGGCGGCTTCATATCATGGCGGAAAGCACCCGCAACGAAATACACCTGACCACACCACGCAG CGCCGGTGGCTACGGCATGGCCGCACAATGGAGTGACGACTTTCACCACGCAGTACATGCCCGGCTTACCGGCGAATCCT GCGGGTACTATGCGGCGTTCCACACCGCGCAAAACCCTGCAAAACCGGCACAGACCCCGCCTGCAGCAGGGCAGCAAAGC AAAGAAGCTCAGAAACGGTGCCCCCCGGCAGCGGCTGTCAGCCCTGTGGACGCGCTGGCAGAAATATTCGTCCGCGGCTG GTTCAGGCAGGGGCAGCTGTGCCCGTGGCGCAAGCAACCTTTCGGAGACCAGCCCCGCGGTCTGCAGCCTTCACAGGTCA TTGTCTATCTGCAGAACCACGATGTCACGGGCAACCGTCCCTCGGGCGAGCGTCTGCACGCGCTCACCTGTCCTGCAGCC CGGCGCATGGCCGCTGCAGCCCTGCTGCTTTCACCTTTTGTTCCGCTGATTTTCATGGGAGAAGAATACGATGATCCGGC CCCCTTCCACTTTTTTGTGGATCACAGCCCGGAATTGAACCGGCAGGTGGCACAGGGCAGACGGCGCGAAGCAGCGGCCT TTGGCTGGATGCCGTGCGCCACGGCACCGGAACCGCATTCACCGGCCGCTTTTGAAAACTCGCGGCTGTCATGGCACCTG CAGGACACCCGGTATCATGCCACTGTCCGCGACCTGTACCGGCGGTGCATACGGCTGCGGCAGACCCTGCCCTCGCTGGA CAGCCCTTCATTTGAGACTCTGTATGTAAGCAGACCCCATCCGCAGGTCATCTGCACCGGCAGAACCGACCCCGCGAGGA TTTACAGCTCGTGGCTGCTGCTCAACTGCGGACCGCAGGCAGCCACGTTCAGCATTGACGCCGCCACGGCCCCGCTGGCC CGCCAGCAGGCGTGGAGTCAGGCACTGTGCACGGCCGACCGCCGCTGGCACAGTCCGCATACACAGGAAGATGAGGCAGA CCTGCCCCACCGCTTTGCCGCGGGAACACACATACCGGTCACTCTGCCGCCGTGGTGTGCGCTGCTTCTGGCCTGA
Upstream 100 bases:
>100_bases GCATGTCCAGACACTGTCCGGTATCCAGCCTTTCCAGCCGCTCCATCACAGTAGGTATTACAGTCGTTTTGTCATTCATG GCTTCTGCATAATCAAGGTT
Downstream 100 bases:
>100_bases CAGCCTGCCCGCTTACAGTGAAGCCCCTTCCAGCTGCAGCAGATAGCGTTTCATATCTACGCCCGCACCCGTATACCCCA CCATGGCCCCTTTGCTGCCC
Product: alpha amylase domain-containing protein
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 691; Mature: 691
Protein sequence:
>691_residues MYRHMCHRAAYGSSGRQPRRHIDFTGRCPHSAVMHTLFVPAHGPRRLPDGSWLFRLWTTRRKPAVLVIEAPCPQEIPMKA CGGGWREARTAPMPAGALYRIRLGDELLADPASAHQPQGIDGPSMTDDPAAFIWTDSGFGAVAMPHAVIYEIHTGTFTPE GTLDAAAGRLPRIAELGVTAVELMPLTETTGRWNWGYDGVFPYSIHHRAGGPDALRRFVDTAHGLGLSVYGDVVLNHLGP EGNNLPKFGPYLSRRHHTPWGACPSFDGASAQAVRRYFLDCCLRLMAHFHMDGLRLDATPYVQDDSAEHILAALTRETQV LAAASGRRLHIMAESTRNEIHLTTPRSAGGYGMAAQWSDDFHHAVHARLTGESCGYYAAFHTAQNPAKPAQTPPAAGQQS KEAQKRCPPAAAVSPVDALAEIFVRGWFRQGQLCPWRKQPFGDQPRGLQPSQVIVYLQNHDVTGNRPSGERLHALTCPAA RRMAAAALLLSPFVPLIFMGEEYDDPAPFHFFVDHSPELNRQVAQGRRREAAAFGWMPCATAPEPHSPAAFENSRLSWHL QDTRYHATVRDLYRRCIRLRQTLPSLDSPSFETLYVSRPHPQVICTGRTDPARIYSSWLLLNCGPQAATFSIDAATAPLA RQQAWSQALCTADRRWHSPHTQEDEADLPHRFAAGTHIPVTLPPWCALLLA
Sequences:
>Translated_691_residues MYRHMCHRAAYGSSGRQPRRHIDFTGRCPHSAVMHTLFVPAHGPRRLPDGSWLFRLWTTRRKPAVLVIEAPCPQEIPMKA CGGGWREARTAPMPAGALYRIRLGDELLADPASAHQPQGIDGPSMTDDPAAFIWTDSGFGAVAMPHAVIYEIHTGTFTPE GTLDAAAGRLPRIAELGVTAVELMPLTETTGRWNWGYDGVFPYSIHHRAGGPDALRRFVDTAHGLGLSVYGDVVLNHLGP EGNNLPKFGPYLSRRHHTPWGACPSFDGASAQAVRRYFLDCCLRLMAHFHMDGLRLDATPYVQDDSAEHILAALTRETQV LAAASGRRLHIMAESTRNEIHLTTPRSAGGYGMAAQWSDDFHHAVHARLTGESCGYYAAFHTAQNPAKPAQTPPAAGQQS KEAQKRCPPAAAVSPVDALAEIFVRGWFRQGQLCPWRKQPFGDQPRGLQPSQVIVYLQNHDVTGNRPSGERLHALTCPAA RRMAAAALLLSPFVPLIFMGEEYDDPAPFHFFVDHSPELNRQVAQGRRREAAAFGWMPCATAPEPHSPAAFENSRLSWHL QDTRYHATVRDLYRRCIRLRQTLPSLDSPSFETLYVSRPHPQVICTGRTDPARIYSSWLLLNCGPQAATFSIDAATAPLA RQQAWSQALCTADRRWHSPHTQEDEADLPHRFAAGTHIPVTLPPWCALLLA >Mature_691_residues MYRHMCHRAAYGSSGRQPRRHIDFTGRCPHSAVMHTLFVPAHGPRRLPDGSWLFRLWTTRRKPAVLVIEAPCPQEIPMKA CGGGWREARTAPMPAGALYRIRLGDELLADPASAHQPQGIDGPSMTDDPAAFIWTDSGFGAVAMPHAVIYEIHTGTFTPE GTLDAAAGRLPRIAELGVTAVELMPLTETTGRWNWGYDGVFPYSIHHRAGGPDALRRFVDTAHGLGLSVYGDVVLNHLGP EGNNLPKFGPYLSRRHHTPWGACPSFDGASAQAVRRYFLDCCLRLMAHFHMDGLRLDATPYVQDDSAEHILAALTRETQV LAAASGRRLHIMAESTRNEIHLTTPRSAGGYGMAAQWSDDFHHAVHARLTGESCGYYAAFHTAQNPAKPAQTPPAAGQQS KEAQKRCPPAAAVSPVDALAEIFVRGWFRQGQLCPWRKQPFGDQPRGLQPSQVIVYLQNHDVTGNRPSGERLHALTCPAA RRMAAAALLLSPFVPLIFMGEEYDDPAPFHFFVDHSPELNRQVAQGRRREAAAFGWMPCATAPEPHSPAAFENSRLSWHL QDTRYHATVRDLYRRCIRLRQTLPSLDSPSFETLYVSRPHPQVICTGRTDPARIYSSWLLLNCGPQAATFSIDAATAPLA RQQAWSQALCTADRRWHSPHTQEDEADLPHRFAAGTHIPVTLPPWCALLLA
Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR022567 - InterPro: IPR012768 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF11941 DUF3459 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 76360; Mature: 76360
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRHMCHRAAYGSSGRQPRRHIDFTGRCPHSAVMHTLFVPAHGPRRLPDGSWLFRLWTTR CCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCCCEEEEEECCC RKPAVLVIEAPCPQEIPMKACGGGWREARTAPMPAGALYRIRLGDELLADPASAHQPQGI CCCEEEEEECCCCCCCCHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCC DGPSMTDDPAAFIWTDSGFGAVAMPHAVIYEIHTGTFTPEGTLDAAAGRLPRIAELGVTA CCCCCCCCCCEEEEECCCCCCEECCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCEE VELMPLTETTGRWNWGYDGVFPYSIHHRAGGPDALRRFVDTAHGLGLSVYGDVVLNHLGP EEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHCCC EGNNLPKFGPYLSRRHHTPWGACPSFDGASAQAVRRYFLDCCLRLMAHFHMDGLRLDATP CCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC YVQDDSAEHILAALTRETQVLAAASGRRLHIMAESTRNEIHLTTPRSAGGYGMAAQWSDD CCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCEEECCCCH FHHAVHARLTGESCGYYAAFHTAQNPAKPAQTPPAAGQQSKEAQKRCPPAAAVSPVDALA HHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCHHHHHH EIFVRGWFRQGQLCPWRKQPFGDQPRGLQPSQVIVYLQNHDVTGNRPSGERLHALTCPAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECHHH RRMAAAALLLSPFVPLIFMGEEYDDPAPFHFFVDHSPELNRQVAQGRRREAAAFGWMPCA HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHCCCCCCC TAPEPHSPAAFENSRLSWHLQDTRYHATVRDLYRRCIRLRQTLPSLDSPSFETLYVSRPH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC PQVICTGRTDPARIYSSWLLLNCGPQAATFSIDAATAPLARQQAWSQALCTADRRWHSPH CCEEEECCCCHHHHHHCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC TQEDEADLPHRFAAGTHIPVTLPPWCALLLA CCCCCCCCCHHHHCCCCCCEECCHHHHHHCC >Mature Secondary Structure MYRHMCHRAAYGSSGRQPRRHIDFTGRCPHSAVMHTLFVPAHGPRRLPDGSWLFRLWTTR CCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCCCCCCCEEEEEECCC RKPAVLVIEAPCPQEIPMKACGGGWREARTAPMPAGALYRIRLGDELLADPASAHQPQGI CCCEEEEEECCCCCCCCHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCC DGPSMTDDPAAFIWTDSGFGAVAMPHAVIYEIHTGTFTPEGTLDAAAGRLPRIAELGVTA CCCCCCCCCCEEEEECCCCCCEECCCEEEEEEECCCCCCCCCHHHHHCCCCCHHHHCCEE VELMPLTETTGRWNWGYDGVFPYSIHHRAGGPDALRRFVDTAHGLGLSVYGDVVLNHLGP EEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHCCC EGNNLPKFGPYLSRRHHTPWGACPSFDGASAQAVRRYFLDCCLRLMAHFHMDGLRLDATP CCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC YVQDDSAEHILAALTRETQVLAAASGRRLHIMAESTRNEIHLTTPRSAGGYGMAAQWSDD CCCCCCHHHHHHHHHHHHEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCCEEECCCCH FHHAVHARLTGESCGYYAAFHTAQNPAKPAQTPPAAGQQSKEAQKRCPPAAAVSPVDALA HHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHCCHHHHHH EIFVRGWFRQGQLCPWRKQPFGDQPRGLQPSQVIVYLQNHDVTGNRPSGERLHALTCPAA HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECHHH RRMAAAALLLSPFVPLIFMGEEYDDPAPFHFFVDHSPELNRQVAQGRRREAAAFGWMPCA HHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHCCCCCCC TAPEPHSPAAFENSRLSWHLQDTRYHATVRDLYRRCIRLRQTLPSLDSPSFETLYVSRPH CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC PQVICTGRTDPARIYSSWLLLNCGPQAATFSIDAATAPLARQQAWSQALCTADRRWHSPH CCEEEECCCCHHHHHHCEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC TQEDEADLPHRFAAGTHIPVTLPPWCALLLA CCCCCCCCCHHHHCCCCCCEECCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8829547 [H]