| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78356017
Identifier: 78356017
GI number: 78356017
Start: 998351
End: 999520
Strand: Direct
Name: 78356017
Synonym: Dde_0970
Alternate gene names: NA
Gene position: 998351-999520 (Clockwise)
Preceding gene: 78356016
Following gene: 78356018
Centisome position: 26.76
GC content: 62.56
Gene sequence:
>1170_bases ATGAAGCGAGAACTCCAAGGCAGATACGTGACCATATCGACGGTGGGTGAGAAGGCCCAGGCCTTCGTGCCCGCGCCGCT GCCGCCACGTCCACCCATCGACTGGACGCCGGAGCTGCGCAGCAAGTTCGACCAGGCGTTGCTCGCGCTCGGGCGGCTGG ATAGCGTTTCGACCCCGCTGCCGGACACCTCGCTGTTCCTCTACATGTATGTTCGCAAGGAAGCGGTGCTTTCTTCCATG ATTGAGGGAACCCAGTCGTCGCTGTCCGACCTGCTGCTGTTCGAGCTGGATCAGGAACCCGGCGTGCCGCTGGATGACGT GCGGGAGGTCAGCAACTATGTTGCGGCCCTTGACCATGGTCTGCGCCTGCTGGAGGAGGGGCTGCCACTGTCGCTGCGGC TGTTCCGCGAGATTCATGGTGTGCTGCTGACCAAGGGGCGTGGCAGCAATCAGACCCCGGGGGAGTTTCGTCGCAGCCAG AACTGGATCGGCGGCACCCGGCCGGGCAATGCGGCTTTCGTTCCGCCTCCGGCCGAAGAGGTACTGGAGTGCATGAGCAA GCTGGAGCTCTTCCTCCATGACCAGCCGGAGCCGACCCCGGTGCTGCTCAAGGCGGCGCTGGCCCATGTGCAGTTCGAGA CGATCCACCCGTTTCTGGACGGTAACGGCCGTCTCGGTCGTCTGCTGATTGCGCTGCTTTTGTGCGAGCAGAAGGTGCTG CGGGAGCCGATGCTCTACCTCAGCCTCTATTTCAAAACACATCGCCAGTACTACTACGAGCTGCTCAACAACGTGCGTAT GACAGGTGACTGGGAAGCCTGGCTCGACTTCTTCTCCGAGGCGGTGATCGTCACCGCCACCCAGGCGGTGGAAACGGCGC AGCAACTTCTCGACCTTTCGAACCAGGACCGCGACAAGATCAGCGGTCTCGGCCGGGCGGCTGCATCCACGCTGCAGATT CACCGGGCGCTGATGGAGCATCCCATCGCCACCTCAGGCTCGCTGGTGGAGAAAACCGGCATCACCCCAACGACCGTCAA CAAGGCGCTCGGTCATCTGGAGCAGCTCGGCATCGTCAAGGAGTTGACCGCCCAGAAACGCAACCGCCTGTTCAGCTATG CGGGCTATATCGAGATCATGAGTCGCGGCACGGAACTGCCGGGCAGGTAG
Upstream 100 bases:
>100_bases CAGGAAATCCGCTTGATTTTTCCTTACCGGCCCTTTATTTTAGGATGTTCGGTTAAAATAAAATAAAGACGAATCTTATT TTAGGTTCGAGGCAGGCAGG
Downstream 100 bases:
>100_bases GTCAATTCGATTCGGTTATGGGAACCGAACCGGCGTCCGAAAACCGGATTCGAAGTTGTTGCGGCTCGACGCCAGGTATC CGTTTTTACTGCAAACCCGT
Product: fic family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKRELQGRYVTISTVGEKAQAFVPAPLPPRPPIDWTPELRSKFDQALLALGRLDSVSTPLPDTSLFLYMYVRKEAVLSSM IEGTQSSLSDLLLFELDQEPGVPLDDVREVSNYVAALDHGLRLLEEGLPLSLRLFREIHGVLLTKGRGSNQTPGEFRRSQ NWIGGTRPGNAAFVPPPAEEVLECMSKLELFLHDQPEPTPVLLKAALAHVQFETIHPFLDGNGRLGRLLIALLLCEQKVL REPMLYLSLYFKTHRQYYYELLNNVRMTGDWEAWLDFFSEAVIVTATQAVETAQQLLDLSNQDRDKISGLGRAAASTLQI HRALMEHPIATSGSLVEKTGITPTTVNKALGHLEQLGIVKELTAQKRNRLFSYAGYIEIMSRGTELPGR
Sequences:
>Translated_389_residues MKRELQGRYVTISTVGEKAQAFVPAPLPPRPPIDWTPELRSKFDQALLALGRLDSVSTPLPDTSLFLYMYVRKEAVLSSM IEGTQSSLSDLLLFELDQEPGVPLDDVREVSNYVAALDHGLRLLEEGLPLSLRLFREIHGVLLTKGRGSNQTPGEFRRSQ NWIGGTRPGNAAFVPPPAEEVLECMSKLELFLHDQPEPTPVLLKAALAHVQFETIHPFLDGNGRLGRLLIALLLCEQKVL REPMLYLSLYFKTHRQYYYELLNNVRMTGDWEAWLDFFSEAVIVTATQAVETAQQLLDLSNQDRDKISGLGRAAASTLQI HRALMEHPIATSGSLVEKTGITPTTVNKALGHLEQLGIVKELTAQKRNRLFSYAGYIEIMSRGTELPGR >Mature_389_residues MKRELQGRYVTISTVGEKAQAFVPAPLPPRPPIDWTPELRSKFDQALLALGRLDSVSTPLPDTSLFLYMYVRKEAVLSSM IEGTQSSLSDLLLFELDQEPGVPLDDVREVSNYVAALDHGLRLLEEGLPLSLRLFREIHGVLLTKGRGSNQTPGEFRRSQ NWIGGTRPGNAAFVPPPAEEVLECMSKLELFLHDQPEPTPVLLKAALAHVQFETIHPFLDGNGRLGRLLIALLLCEQKVL REPMLYLSLYFKTHRQYYYELLNNVRMTGDWEAWLDFFSEAVIVTATQAVETAQQLLDLSNQDRDKISGLGRAAASTLQI HRALMEHPIATSGSLVEKTGITPTTVNKALGHLEQLGIVKELTAQKRNRLFSYAGYIEIMSRGTELPGR
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 43482; Mature: 43482
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRELQGRYVTISTVGEKAQAFVPAPLPPRPPIDWTPELRSKFDQALLALGRLDSVSTPL CCCCCCCCEEEEEECCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PDTSLFLYMYVRKEAVLSSMIEGTQSSLSDLLLFELDQEPGVPLDDVREVSNYVAALDHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH LRLLEEGLPLSLRLFREIHGVLLTKGRGSNQTPGEFRRSQNWIGGTRPGNAAFVPPPAEE HHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHH VLECMSKLELFLHDQPEPTPVLLKAALAHVQFETIHPFLDGNGRLGRLLIALLLCEQKVL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH REPMLYLSLYFKTHRQYYYELLNNVRMTGDWEAWLDFFSEAVIVTATQAVETAQQLLDLS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQDRDKISGLGRAAASTLQIHRALMEHPIATSGSLVEKTGITPTTVNKALGHLEQLGIVK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH ELTAQKRNRLFSYAGYIEIMSRGTELPGR HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKRELQGRYVTISTVGEKAQAFVPAPLPPRPPIDWTPELRSKFDQALLALGRLDSVSTPL CCCCCCCCEEEEEECCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC PDTSLFLYMYVRKEAVLSSMIEGTQSSLSDLLLFELDQEPGVPLDDVREVSNYVAALDHG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH LRLLEEGLPLSLRLFREIHGVLLTKGRGSNQTPGEFRRSQNWIGGTRPGNAAFVPPPAEE HHHHHCCCCHHHHHHHHHHHHEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHH VLECMSKLELFLHDQPEPTPVLLKAALAHVQFETIHPFLDGNGRLGRLLIALLLCEQKVL HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH REPMLYLSLYFKTHRQYYYELLNNVRMTGDWEAWLDFFSEAVIVTATQAVETAQQLLDLS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NQDRDKISGLGRAAASTLQIHRALMEHPIATSGSLVEKTGITPTTVNKALGHLEQLGIVK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH ELTAQKRNRLFSYAGYIEIMSRGTELPGR HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]