| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is glmS [H]
Identifier: 78356005
GI number: 78356005
Start: 982896
End: 983693
Strand: Direct
Name: glmS [H]
Synonym: Dde_0958
Alternate gene names: 78356005
Gene position: 982896-983693 (Clockwise)
Preceding gene: 78356004
Following gene: 78356006
Centisome position: 26.35
GC content: 65.04
Gene sequence:
>798_bases ATGTGCGGACAAGTAGGCATCATCTTCGGCCGCAAGCGCAGACGGCCGGACGAGCAGGATTACCTGCGCGAGGTCTTCAT CCGCATGCTGCTGCACAGCGAGGAGCGCGGCCCGCACGCCTCCGGTCTGGCCTGGCTCAAGATCGACGGCAGCCACCGGA TCTTCAAGCGGCCGATGCGGGCGCACGAACTGGTCTACGAGAAGCCGTTCCAGGAGCTGCTCGGGCAGGTCGACAACGAG ACCACCATCCTCATGGGCCACACCCGCTGGCGCACCCGGGGCAACGAGTTCAACAACCGCAACAACCATCCCATCCGGGC CGGGATCGTCATCGGTACCCACAACGGCACCATCTACAACGCCGATTATCTGTTCCGCCGTCTCGGGCTGCCGCGCTTCG CCGAAGTGGACAGCGAGCTGATCTTCCGCCTGGCCGACCGCTTCGCGCCCGAAGGCCCCATCGACCAGGAGGGCCTGAAG AAGGCGCTCGCCCTCTGTCGCGGCCAGATGAGCGCCGTGCTGGCCTCGCGGCTCGACCCCGGCACCATCACCGTGCTCAA GGGCAACAAACCGCTCTGCCTGCGCATCCACCGCCAGCACCGGGTGGTGCTCTACGCCTCGGAGCCAGCCTTCATCGACT TTGCCGTGGACTTTGATCCGGGCTGGCGCGAGCTGGAGGTGCCGCCCATGACCATGCTCACCATCCGCCACAAGGATGTG CGGGCCATCGAAAACAGCGAATTCCGCTTCATACCCCAGGAGCGCAAAGGGACACTGCCCGAAGGAGTGAATGCATGA
Upstream 100 bases:
>100_bases CCGAGTGGCTGACGGGCCACCGGCGCGAGTACGCGGCCTTCGTCCTCGATGGGACAAGACCGCTCGGCAAGAACTTCGGC GGCAAGGAGGACCCGGCTCC
Downstream 100 bases:
>100_bases ACATTGGAGAACCATCAAAGCTGAACACAAATCCGGAAGACAGTCCCGAGACCATCCTCCGGCTCTTCGTCTACGGCACC CTGAAACGGGGCTATTGGAA
Product: glucosamine 6-phosphate synthetase-like
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MCGQVGIIFGRKRRRPDEQDYLREVFIRMLLHSEERGPHASGLAWLKIDGSHRIFKRPMRAHELVYEKPFQELLGQVDNE TTILMGHTRWRTRGNEFNNRNNHPIRAGIVIGTHNGTIYNADYLFRRLGLPRFAEVDSELIFRLADRFAPEGPIDQEGLK KALALCRGQMSAVLASRLDPGTITVLKGNKPLCLRIHRQHRVVLYASEPAFIDFAVDFDPGWRELEVPPMTMLTIRHKDV RAIENSEFRFIPQERKGTLPEGVNA
Sequences:
>Translated_265_residues MCGQVGIIFGRKRRRPDEQDYLREVFIRMLLHSEERGPHASGLAWLKIDGSHRIFKRPMRAHELVYEKPFQELLGQVDNE TTILMGHTRWRTRGNEFNNRNNHPIRAGIVIGTHNGTIYNADYLFRRLGLPRFAEVDSELIFRLADRFAPEGPIDQEGLK KALALCRGQMSAVLASRLDPGTITVLKGNKPLCLRIHRQHRVVLYASEPAFIDFAVDFDPGWRELEVPPMTMLTIRHKDV RAIENSEFRFIPQERKGTLPEGVNA >Mature_265_residues MCGQVGIIFGRKRRRPDEQDYLREVFIRMLLHSEERGPHASGLAWLKIDGSHRIFKRPMRAHELVYEKPFQELLGQVDNE TTILMGHTRWRTRGNEFNNRNNHPIRAGIVIGTHNGTIYNADYLFRRLGLPRFAEVDSELIFRLADRFAPEGPIDQEGLK KALALCRGQMSAVLASRLDPGTITVLKGNKPLCLRIHRQHRVVLYASEPAFIDFAVDFDPGWRELEVPPMTMLTIRHKDV RAIENSEFRFIPQERKGTLPEGVNA
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 30515; Mature: 30515
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGQVGIIFGRKRRRPDEQDYLREVFIRMLLHSEERGPHASGLAWLKIDGSHRIFKRPMR CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHH AHELVYEKPFQELLGQVDNETTILMGHTRWRTRGNEFNNRNNHPIRAGIVIGTHNGTIYN HHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCEEEEEEEECCCCEEEE ADYLFRRLGLPRFAEVDSELIFRLADRFAPEGPIDQEGLKKALALCRGQMSAVLASRLDP HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GTITVLKGNKPLCLRIHRQHRVVLYASEPAFIDFAVDFDPGWRELEVPPMTMLTIRHKDV CEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCEECCCCEEEEEEECCHH RAIENSEFRFIPQERKGTLPEGVNA HHHCCCCEEECCHHHCCCCCCCCCC >Mature Secondary Structure MCGQVGIIFGRKRRRPDEQDYLREVFIRMLLHSEERGPHASGLAWLKIDGSHRIFKRPMR CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHH AHELVYEKPFQELLGQVDNETTILMGHTRWRTRGNEFNNRNNHPIRAGIVIGTHNGTIYN HHHHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCEEEEEEEECCCCEEEE ADYLFRRLGLPRFAEVDSELIFRLADRFAPEGPIDQEGLKKALALCRGQMSAVLASRLDP HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC GTITVLKGNKPLCLRIHRQHRVVLYASEPAFIDFAVDFDPGWRELEVPPMTMLTIRHKDV CEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCEECCCCEEEEEEECCHH RAIENSEFRFIPQERKGTLPEGVNA HHHCCCCEEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]