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The map label for this gene is 78355947

Identifier: 78355947

GI number: 78355947

Start: 926234

End: 926818

Strand: Direct

Name: 78355947

Synonym: Dde_0900

Alternate gene names: NA

Gene position: 926234-926818 (Clockwise)

Preceding gene: 78355946

Following gene: 78355948

Centisome position: 24.83

GC content: 55.9

Gene sequence:

>585_bases
ATGTTTTATCGAAATTCCTATGACGGCATCGATGGCTATGCCGCAGACCTTATTCGGCACAAGGCAAGACAACTGGTGGG
TAAAGCAGGACTGACAGAAGACGATCGGCAGGATCTCGAGCAGGAACTGATGATCGATCTGCTGGGCAGGATGAAGCACT
TCAATCCAGCCAAGGGCAAAAAGACAACCTTCATGACCCGCATCGTTGAGCGGCGGATCTCAACCATTCTGGAAGCCCGC
TTCGCGCAATGCCGGGACTGGCGCAAATGCACCGCCTCTCTCAACGATCCCATTCCGGGCGGAGATAACGATTCCGCCGA
GCGTATCGAGCAGGTCTGCAGTGATGGACAGATGGGACATCACGGCCGGGATACCAACGAGCAACGGCAGAACGACATCC
GCTTCGATCTCGAACGGGTCATTGCCGCACTGCCGGAAGACCTGCAGGAGCTCTGCGAAAAACTGCAGTCGAGCAACATG
GCTGAAATCGCAAGGGAGATGGGCGTTCCGCGCAGCACCCTCTACGGAAAACTGACCAAGCTGCGGGACGCATTCCGGGA
TGGTGGATTGGAAGAATACCTCTGA

Upstream 100 bases:

>100_bases
GCGAACCTGCGACACTCCGCTTGTTGGATCAGCTCCTTCCTCTGTTTCCGGCCCGTGCCGACACCCACGCGGTGCTCCTC
CTCGCTCCGAGGAGGACCAA

Downstream 100 bases:

>100_bases
TCGACCGACGCATCGCCCGGGGTTCCGGTAAGTAAGCATCGTGCCGCATGAAGCGGACGACCGGGGCCTCGGTAAACAGA
AAACCTGCAAAACAACAGGA

Product: sigma-24 factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-70 Family RNA Polymerase Sigma Factor; Sigma-24 Factor

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MFYRNSYDGIDGYAADLIRHKARQLVGKAGLTEDDRQDLEQELMIDLLGRMKHFNPAKGKKTTFMTRIVERRISTILEAR
FAQCRDWRKCTASLNDPIPGGDNDSAERIEQVCSDGQMGHHGRDTNEQRQNDIRFDLERVIAALPEDLQELCEKLQSSNM
AEIAREMGVPRSTLYGKLTKLRDAFRDGGLEEYL

Sequences:

>Translated_194_residues
MFYRNSYDGIDGYAADLIRHKARQLVGKAGLTEDDRQDLEQELMIDLLGRMKHFNPAKGKKTTFMTRIVERRISTILEAR
FAQCRDWRKCTASLNDPIPGGDNDSAERIEQVCSDGQMGHHGRDTNEQRQNDIRFDLERVIAALPEDLQELCEKLQSSNM
AEIAREMGVPRSTLYGKLTKLRDAFRDGGLEEYL
>Mature_194_residues
MFYRNSYDGIDGYAADLIRHKARQLVGKAGLTEDDRQDLEQELMIDLLGRMKHFNPAKGKKTTFMTRIVERRISTILEAR
FAQCRDWRKCTASLNDPIPGGDNDSAERIEQVCSDGQMGHHGRDTNEQRQNDIRFDLERVIAALPEDLQELCEKLQSSNM
AEIAREMGVPRSTLYGKLTKLRDAFRDGGLEEYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22239; Mature: 22239

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFYRNSYDGIDGYAADLIRHKARQLVGKAGLTEDDRQDLEQELMIDLLGRMKHFNPAKGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTTFMTRIVERRISTILEARFAQCRDWRKCTASLNDPIPGGDNDSAERIEQVCSDGQMGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
HGRDTNEQRQNDIRFDLERVIAALPEDLQELCEKLQSSNMAEIAREMGVPRSTLYGKLTK
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
LRDAFRDGGLEEYL
HHHHHHCCCHHCCC
>Mature Secondary Structure
MFYRNSYDGIDGYAADLIRHKARQLVGKAGLTEDDRQDLEQELMIDLLGRMKHFNPAKGK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KTTFMTRIVERRISTILEARFAQCRDWRKCTASLNDPIPGGDNDSAERIEQVCSDGQMGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCC
HGRDTNEQRQNDIRFDLERVIAALPEDLQELCEKLQSSNMAEIAREMGVPRSTLYGKLTK
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHH
LRDAFRDGGLEEYL
HHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA