| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355931
Identifier: 78355931
GI number: 78355931
Start: 914489
End: 915460
Strand: Reverse
Name: 78355931
Synonym: Dde_0884
Alternate gene names: NA
Gene position: 915460-914489 (Counterclockwise)
Preceding gene: 78355932
Following gene: 78355930
Centisome position: 24.54
GC content: 60.49
Gene sequence:
>972_bases ATGCATCGATTTTTTGCATGCGACACAGTGCGGAGTGTTTTCTATACTCCGCCCATGGACACACTGCACACTCCGCGCGC CAAAGGCAGCCCTTCCACTGCTGCACTGTTTGCGCCTGCGCAGCGCTCTTTCAACATCCGGACGGTCTACTCCGCAGGGT CGGGCAAAGAAAACGAAGACAGGCTGATCGCGGCGGGCAACAGCTTTGCCGTGGTGGACGGGGCTTCAAGTCTGGACGGC ACCCTGTACGACGGACACACCGGTGCATGGAATGCGGCCTGCTGCGTCAGCGCTGCACTGGAACGCGGCTTTGCTCTGCA GGACGAACCGTCTCTCACCGGCATCATGCAGCGGGCCAATGCATATCTGGCGCGTCAGATGGCATCATACGGTATAGATA CTTCAGCACCGCAAGACAGGCTGCGGTTGTGGTCGGCCAGTGCGGCAGCTCTGCGTCTGACAGAAAACAGCGCACAATGG GCGCAGATAGGCGACTGCCGCGTCATGTTCATAGACACCTCAGGCCGCTGGCACATGCCCGCGCGCAACTACGACCATGA CAGGCTGACCATGATACGCTGGAAACAGTTAAGCCGTGCGGGCGTCCGTGATATCCGCGCTGCGCTGCACGACCAGATTG TATCGGTACGCCGCAGCATGAACCGCACCTTCGGCGTTCTGAACGGTGAGCCGGAAATGAGCAGGTTTCTGCAGTACGGA GAAATGTCGCTGGACGGCATAGCCCATATTCTGCTGTTCACCGACGGACTTTCGCTGCCCGAAGCCGCACCGGAGTACGG AACATCGTTCGGCGATCTGGCCCGCGCCTACCTGACCAGAGGCCTTGAGGGACTGCACCGGCATATACACGCGCTGCAGA GTCAGGACCCCGACTGCCGCATGTTTCCGCGCTTCAAATGCCATGACGACGTGGCCGCCGTGGCGCTGACCATGCAGCAG GCCGGTACCTAG
Upstream 100 bases:
>100_bases TACGCACCCGTGCAATAAGCCGCGAGGGCGGATCACAGGATAAAAGGCGGGCAATGACCCGCCTTTTGTCATATCAGTTC TACCTATAACAATTACAAGC
Downstream 100 bases:
>100_bases CCATGGTCCGGAGCACCGGCCGGCATGTCATTTTCATGCTGTGCATACCGGCCTGAGCACCGGAAACAGGGCTTTGATCC TGTGGCGGCAAGCGCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHRFFACDTVRSVFYTPPMDTLHTPRAKGSPSTAALFAPAQRSFNIRTVYSAGSGKENEDRLIAAGNSFAVVDGASSLDG TLYDGHTGAWNAACCVSAALERGFALQDEPSLTGIMQRANAYLARQMASYGIDTSAPQDRLRLWSASAAALRLTENSAQW AQIGDCRVMFIDTSGRWHMPARNYDHDRLTMIRWKQLSRAGVRDIRAALHDQIVSVRRSMNRTFGVLNGEPEMSRFLQYG EMSLDGIAHILLFTDGLSLPEAAPEYGTSFGDLARAYLTRGLEGLHRHIHALQSQDPDCRMFPRFKCHDDVAAVALTMQQ AGT
Sequences:
>Translated_323_residues MHRFFACDTVRSVFYTPPMDTLHTPRAKGSPSTAALFAPAQRSFNIRTVYSAGSGKENEDRLIAAGNSFAVVDGASSLDG TLYDGHTGAWNAACCVSAALERGFALQDEPSLTGIMQRANAYLARQMASYGIDTSAPQDRLRLWSASAAALRLTENSAQW AQIGDCRVMFIDTSGRWHMPARNYDHDRLTMIRWKQLSRAGVRDIRAALHDQIVSVRRSMNRTFGVLNGEPEMSRFLQYG EMSLDGIAHILLFTDGLSLPEAAPEYGTSFGDLARAYLTRGLEGLHRHIHALQSQDPDCRMFPRFKCHDDVAAVALTMQQ AGT >Mature_323_residues MHRFFACDTVRSVFYTPPMDTLHTPRAKGSPSTAALFAPAQRSFNIRTVYSAGSGKENEDRLIAAGNSFAVVDGASSLDG TLYDGHTGAWNAACCVSAALERGFALQDEPSLTGIMQRANAYLARQMASYGIDTSAPQDRLRLWSASAAALRLTENSAQW AQIGDCRVMFIDTSGRWHMPARNYDHDRLTMIRWKQLSRAGVRDIRAALHDQIVSVRRSMNRTFGVLNGEPEMSRFLQYG EMSLDGIAHILLFTDGLSLPEAAPEYGTSFGDLARAYLTRGLEGLHRHIHALQSQDPDCRMFPRFKCHDDVAAVALTMQQ AGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35639; Mature: 35639
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRFFACDTVRSVFYTPPMDTLHTPRAKGSPSTAALFAPAQRSFNIRTVYSAGSGKENED CCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCC RLIAAGNSFAVVDGASSLDGTLYDGHTGAWNAACCVSAALERGFALQDEPSLTGIMQRAN CEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AYLARQMASYGIDTSAPQDRLRLWSASAAALRLTENSAQWAQIGDCRVMFIDTSGRWHMP HHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEECCEEEEEEECCCCEECC ARNYDHDRLTMIRWKQLSRAGVRDIRAALHDQIVSVRRSMNRTFGVLNGEPEMSRFLQYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHC EMSLDGIAHILLFTDGLSLPEAAPEYGTSFGDLARAYLTRGLEGLHRHIHALQSQDPDCR CCCHHHHHEEEHEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MFPRFKCHDDVAAVALTMQQAGT CCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHRFFACDTVRSVFYTPPMDTLHTPRAKGSPSTAALFAPAQRSFNIRTVYSAGSGKENED CCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCC RLIAAGNSFAVVDGASSLDGTLYDGHTGAWNAACCVSAALERGFALQDEPSLTGIMQRAN CEEECCCCEEEEECCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AYLARQMASYGIDTSAPQDRLRLWSASAAALRLTENSAQWAQIGDCRVMFIDTSGRWHMP HHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEECCEEEEEEECCCCEECC ARNYDHDRLTMIRWKQLSRAGVRDIRAALHDQIVSVRRSMNRTFGVLNGEPEMSRFLQYG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHC EMSLDGIAHILLFTDGLSLPEAAPEYGTSFGDLARAYLTRGLEGLHRHIHALQSQDPDCR CCCHHHHHEEEHEECCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MFPRFKCHDDVAAVALTMQQAGT CCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA