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The map label for this gene is ygbF [H]

Identifier: 78355904

GI number: 78355904

Start: 886318

End: 886614

Strand: Reverse

Name: ygbF [H]

Synonym: Dde_0857

Alternate gene names: 78355904

Gene position: 886614-886318 (Counterclockwise)

Preceding gene: 78355905

Following gene: 78355874

Centisome position: 23.77

GC content: 49.49

Gene sequence:

>297_bases
ATGACGGTCATCGTGGTTGAAAACGTGCCTCCACGACTTCGCGGGCGCTTGGCAGTCTGGATGCTTGAAATCAGAGCAGG
AGTCTATGTGGGTTCTTTTTCTGTCAAAGTTCGCGAAATGGTATGGGAAAACGTGGAAAAGGGTATTGAAGAAGGGAATG
CTGTTATGGTGTGGCGTGCGCAGACAGAATCCGGTTTCGAATTCCGCACACTAGGAGCAAACAGGCGACACCCCGTTGAT
TTTGATGGAACTCCTCTGGTTTCTTTCTTCCCTTCTCCCGAGATTTTGGGGCTATAA

Upstream 100 bases:

>100_bases
ATCCCCACTATTGAAGAAGTGCTGGCCGCCGGTGAAATTGCCCCGCCTGAAATTGAAGGAGTTGTTACGCCGGCAATACA
GGAAAAAGAGGGTATAGGCG

Downstream 100 bases:

>100_bases
AAATGTTCAATAATTTTGGCTAACTACAACAGGCAAAAAGGGTAGTTCTATTCGCTCTTATTTTAGCGTAGCATTTCAAT
GTGTTACAAAAGGAATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MTVIVVENVPPRLRGRLAVWMLEIRAGVYVGSFSVKVREMVWENVEKGIEEGNAVMVWRAQTESGFEFRTLGANRRHPVD
FDGTPLVSFFPSPEILGL

Sequences:

>Translated_98_residues
MTVIVVENVPPRLRGRLAVWMLEIRAGVYVGSFSVKVREMVWENVEKGIEEGNAVMVWRAQTESGFEFRTLGANRRHPVD
FDGTPLVSFFPSPEILGL
>Mature_97_residues
TVIVVENVPPRLRGRLAVWMLEIRAGVYVGSFSVKVREMVWENVEKGIEEGNAVMVWRAQTESGFEFRTLGANRRHPVDF
DGTPLVSFFPSPEILGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=91, Percent_Identity=65.9340659340659, Blast_Score=131, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11076; Mature: 10945

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIVVENVPPRLRGRLAVWMLEIRAGVYVGSFSVKVREMVWENVEKGIEEGNAVMVWRA
CEEEEEECCCCHHHCEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEE
QTESGFEFRTLGANRRHPVDFDGTPLVSFFPSPEILGL
CCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEECC
>Mature Secondary Structure 
TVIVVENVPPRLRGRLAVWMLEIRAGVYVGSFSVKVREMVWENVEKGIEEGNAVMVWRA
EEEEEECCCCHHHCEEEEEEEEEECCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEEE
QTESGFEFRTLGANRRHPVDFDGTPLVSFFPSPEILGL
CCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]