Click here to switch to the map view.

The map label for this gene is gntX [H]

Identifier: 78355831

GI number: 78355831

Start: 805083

End: 805838

Strand: Reverse

Name: gntX [H]

Synonym: Dde_0784

Alternate gene names: 78355831

Gene position: 805838-805083 (Counterclockwise)

Preceding gene: 78355832

Following gene: 78355825

Centisome position: 21.6

GC content: 63.76

Gene sequence:

>756_bases
ATGATGCAGGCCCTGCGCCGGATAAAGCGCATAATCGCACTGCGCGAACGCCGCTGCATGGTCTGCGGCGACTGTTTCCG
GCCGCAGCAGACCGCGGTGCTGCTGTGCAACAGCTGCCGCCGGCAACTGGTCCAGCGCACCGGCGGTTTCTGCCCCCGGT
GCGGTCTGCCCCATGCGCTGGAGTCCATGCCCCTCACGCTCTGCTCTTCATGCATATCCACCCCGCCCCCGTGGCTTTCG
CTGCGTTTTTACGGGCTGTATGACGGGCTGCTGCGCAGGATCATCATCCGGTACAAACACACCCCCGACCTGACCCTGCA
CCCTCTCATGGGCCACATGCTCTGTCAGGCACTGCGCCTGCGTCCTTTTTCGCCACAGGAAAAGCCGGACGTCATAGTGC
CCGTACCGCTGCATCCGGCGCGCCTGCACATGCGCGGCTTCAACCAGAGCTACCTGCCTGCACGTCCGGCAGCGGTCATG
CTGACCGTTCCTCTGCAAAAAAACATACTGCGCCGCACACGATACACTTCTGCCCAGACAGGGCTGCCGAAAGAGGAACG
GCGGCGCAACCTGCGTGATGCCTTTGAAGCGGACAGTTGTGTACGCGGCAGAAACGTGCTGCTGGTAGACGACGTGATGA
CCACAGGCGCCACACTGGAACACTGCGCGCAGGCCCTGTACCACGCAGGCGCACAGCAGGTGCATGCCGTGGTGGCCGCA
AGAACGCCGCCGCACGCACACCGGCAGACAGCATGA

Upstream 100 bases:

>100_bases
TGGACGATGCCGAAGCGCTGGAACGCCAGCCGGAAACCCTGCAGCAGATCACCGCATACGGCCGGCAGGCGGCAGAGGCC
TTTTTGCGGTCTGATGAGCG

Downstream 100 bases:

>100_bases
CGAAAAGCCGCCGTACTGCCCGACCGGTCTGCCCCCCCATTCTGCCAGCCGTCCTGCCAGCGATACAGCCAACCGGACAG
GCGTCAGTGTAATCTGCTGT

Product: ComF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MMQALRRIKRIIALRERRCMVCGDCFRPQQTAVLLCNSCRRQLVQRTGGFCPRCGLPHALESMPLTLCSSCISTPPPWLS
LRFYGLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALRLRPFSPQEKPDVIVPVPLHPARLHMRGFNQSYLPARPAAVM
LTVPLQKNILRRTRYTSAQTGLPKEERRRNLRDAFEADSCVRGRNVLLVDDVMTTGATLEHCAQALYHAGAQQVHAVVAA
RTPPHAHRQTA

Sequences:

>Translated_251_residues
MMQALRRIKRIIALRERRCMVCGDCFRPQQTAVLLCNSCRRQLVQRTGGFCPRCGLPHALESMPLTLCSSCISTPPPWLS
LRFYGLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALRLRPFSPQEKPDVIVPVPLHPARLHMRGFNQSYLPARPAAVM
LTVPLQKNILRRTRYTSAQTGLPKEERRRNLRDAFEADSCVRGRNVLLVDDVMTTGATLEHCAQALYHAGAQQVHAVVAA
RTPPHAHRQTA
>Mature_251_residues
MMQALRRIKRIIALRERRCMVCGDCFRPQQTAVLLCNSCRRQLVQRTGGFCPRCGLPHALESMPLTLCSSCISTPPPWLS
LRFYGLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALRLRPFSPQEKPDVIVPVPLHPARLHMRGFNQSYLPARPAAVM
LTVPLQKNILRRTRYTSAQTGLPKEERRRNLRDAFEADSCVRGRNVLLVDDVMTTGATLEHCAQALYHAGAQQVHAVVAA
RTPPHAHRQTA

Specific function: Could be involved in gluconate metabolism [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

Organism=Escherichia coli, GI87082263, Length=209, Percent_Identity=33.9712918660287, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 28467; Mature: 28467

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQALRRIKRIIALRERRCMVCGDCFRPQQTAVLLCNSCRRQLVQRTGGFCPRCGLPHAL
CHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ESMPLTLCSSCISTPPPWLSLRFYGLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALRL
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RPFSPQEKPDVIVPVPLHPARLHMRGFNQSYLPARPAAVMLTVPLQKNILRRTRYTSAQT
CCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCHHHC
GLPKEERRRNLRDAFEADSCVRGRNVLLVDDVMTTGATLEHCAQALYHAGAQQVHAVVAA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHCHHHHHHHHHC
RTPPHAHRQTA
CCCCCCCCCCC
>Mature Secondary Structure
MMQALRRIKRIIALRERRCMVCGDCFRPQQTAVLLCNSCRRQLVQRTGGFCPRCGLPHAL
CHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
ESMPLTLCSSCISTPPPWLSLRFYGLYDGLLRRIIIRYKHTPDLTLHPLMGHMLCQALRL
HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC
RPFSPQEKPDVIVPVPLHPARLHMRGFNQSYLPARPAAVMLTVPLQKNILRRTRYTSAQT
CCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCHHHC
GLPKEERRRNLRDAFEADSCVRGRNVLLVDDVMTTGATLEHCAQALYHAGAQQVHAVVAA
CCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHCCHHHHHHHHHHHHHCHHHHHHHHHC
RTPPHAHRQTA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]