Definition Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome.
Accession NC_007519
Length 3,730,232

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The map label for this gene is 78355787

Identifier: 78355787

GI number: 78355787

Start: 767543

End: 768682

Strand: Reverse

Name: 78355787

Synonym: Dde_0740

Alternate gene names: NA

Gene position: 768682-767543 (Counterclockwise)

Preceding gene: 78355788

Following gene: 78355786

Centisome position: 20.61

GC content: 60.79

Gene sequence:

>1140_bases
ATGACTTCTCCCTGCCCGCAAATTTTATGGAACATGACAAGAAAATGCAATTTTTCCTGTCATTACTGTTACTTTCCCCA
TGACAACTCACCCGTTTCCGACTCATTACCCGTCGCCGCGCTGCTGGACTTTCTGCGGTCGCGCGGAGGAGAATGGCTGG
TGGGACTAACCGGCGGTGAACCGTTCATCTATCCGTATTTTGTGGATATCTGCAGTGCCATTGCCGCAGAACACCGTATC
GGCATTGATACCAACCTCAGTGTGACACCGGTCGTCAAACGCTTTGCCCGGCACGTACCGCCCGACAGAGTGCACGACAT
ATACGCCGCGCTGCACATTGAAGAACGCGAACGCAGAGGGGCTGTGGATGCTTTTATCCGCAATTACCATACCCTTGCCG
GGCGCGGTTTCACGGTCAAGGTGAACTATGTGGTGCACCCGTCGCTGGTGCAGCGCTTTGCCGCCGACTGTGAATTTTTC
GGCCGCCACGGAATACCGCTCACACCGCGCCCCTTCAAGGGCGTTTACGAAGGCCGCAGATACCCCGAAGGATACGGCAG
CACAGCCGCAGCCATTTTTACACAGCACCCCGAAGCGGGCAGAAAAACCGTTTTCAACTTTCACGGCGTACCCTGCCACG
GCGGGCACACCTTTCTGCGCATGGAGCCGGACGGCACGGTGCTGCGCTGCCCCGGCGACAAGACGGTGCTCGGCAACGTG
CTTTCAGGCACTGTGCAGACAGAAAGCGGCCCCACCCCGTGCCGCATGCACCGCTGCCCCTGTCAGGGTGTGGAGCACAT
CCTGCCCGACGCCGCGCAGCAGGATTTCATCGAGGGTGTGCGCGCCTATGTGGTGGGCGACCTGCCCGCGGCGCAACGGG
CCTTTACCGCCGCACACAGCCGGGCACCGGCCATGACACAGGCTGCCAACAACGCCGGTGTGGCCGCATTCGCCGCGGGC
GATGCTCAGGCGGCAGCGTGCTGTTTTGCCCGGGCTGCCGCCGACGATCCAGTCACACCGCTTTATGCCGCCAATCTCAA
GCTGGCCCGCCGCGCGGCACAACCGTCTCCGCCTTCCGGAACGGAAAACGAAACGCCTGAACTCTCACTTGCAGTCAACT
ACCAGCGTACCGGCAACTGA

Upstream 100 bases:

>100_bases
TTTACAGTACTCCGGCAGGGCATAAAAAGCCAGCATATTTTTTTCTGATAATTAATGAAGCACTATAGAAAAAAGGTCCG
CTCTGCTGTATGAAAAGAGT

Downstream 100 bases:

>100_bases
CCAAAAGAGCAGCCGCATGTCCCAGACATATAATATACTGATGTATTCGCACGACACATACGGGCTGGGGCACATCCGCA
GAACCATGACCATAGCGCAG

Product: Fe-S oxidoreductase-like

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical Sam Domain Protein; Fe-S Oxidoreductase-Like

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTSPCPQILWNMTRKCNFSCHYCYFPHDNSPVSDSLPVAALLDFLRSRGGEWLVGLTGGEPFIYPYFVDICSAIAAEHRI
GIDTNLSVTPVVKRFARHVPPDRVHDIYAALHIEERERRGAVDAFIRNYHTLAGRGFTVKVNYVVHPSLVQRFAADCEFF
GRHGIPLTPRPFKGVYEGRRYPEGYGSTAAAIFTQHPEAGRKTVFNFHGVPCHGGHTFLRMEPDGTVLRCPGDKTVLGNV
LSGTVQTESGPTPCRMHRCPCQGVEHILPDAAQQDFIEGVRAYVVGDLPAAQRAFTAAHSRAPAMTQAANNAGVAAFAAG
DAQAAACCFARAAADDPVTPLYAANLKLARRAAQPSPPSGTENETPELSLAVNYQRTGN

Sequences:

>Translated_379_residues
MTSPCPQILWNMTRKCNFSCHYCYFPHDNSPVSDSLPVAALLDFLRSRGGEWLVGLTGGEPFIYPYFVDICSAIAAEHRI
GIDTNLSVTPVVKRFARHVPPDRVHDIYAALHIEERERRGAVDAFIRNYHTLAGRGFTVKVNYVVHPSLVQRFAADCEFF
GRHGIPLTPRPFKGVYEGRRYPEGYGSTAAAIFTQHPEAGRKTVFNFHGVPCHGGHTFLRMEPDGTVLRCPGDKTVLGNV
LSGTVQTESGPTPCRMHRCPCQGVEHILPDAAQQDFIEGVRAYVVGDLPAAQRAFTAAHSRAPAMTQAANNAGVAAFAAG
DAQAAACCFARAAADDPVTPLYAANLKLARRAAQPSPPSGTENETPELSLAVNYQRTGN
>Mature_378_residues
TSPCPQILWNMTRKCNFSCHYCYFPHDNSPVSDSLPVAALLDFLRSRGGEWLVGLTGGEPFIYPYFVDICSAIAAEHRIG
IDTNLSVTPVVKRFARHVPPDRVHDIYAALHIEERERRGAVDAFIRNYHTLAGRGFTVKVNYVVHPSLVQRFAADCEFFG
RHGIPLTPRPFKGVYEGRRYPEGYGSTAAAIFTQHPEAGRKTVFNFHGVPCHGGHTFLRMEPDGTVLRCPGDKTVLGNVL
SGTVQTESGPTPCRMHRCPCQGVEHILPDAAQQDFIEGVRAYVVGDLPAAQRAFTAAHSRAPAMTQAANNAGVAAFAAGD
AQAAACCFARAAADDPVTPLYAANLKLARRAAQPSPPSGTENETPELSLAVNYQRTGN

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41218; Mature: 41087

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPCPQILWNMTRKCNFSCHYCYFPHDNSPVSDSLPVAALLDFLRSRGGEWLVGLTGGE
CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCC
PFIYPYFVDICSAIAAEHRIGIDTNLSVTPVVKRFARHVPPDRVHDIYAALHIEERERRG
CEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEHHHHHCC
AVDAFIRNYHTLAGRGFTVKVNYVVHPSLVQRFAADCEFFGRHGIPLTPRPFKGVYEGRR
HHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
YPEGYGSTAAAIFTQHPEAGRKTVFNFHGVPCHGGHTFLRMEPDGTVLRCPGDKTVLGNV
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHH
LSGTVQTESGPTPCRMHRCPCQGVEHILPDAAQQDFIEGVRAYVVGDLPAAQRAFTAAHS
HHCEEECCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
RAPAMTQAANNAGVAAFAAGDAQAAACCFARAAADDPVTPLYAANLKLARRAAQPSPPSG
CCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
TENETPELSLAVNYQRTGN
CCCCCCEEEEEEEEEECCC
>Mature Secondary Structure 
TSPCPQILWNMTRKCNFSCHYCYFPHDNSPVSDSLPVAALLDFLRSRGGEWLVGLTGGE
CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCC
PFIYPYFVDICSAIAAEHRIGIDTNLSVTPVVKRFARHVPPDRVHDIYAALHIEERERRG
CEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEHHHHHCC
AVDAFIRNYHTLAGRGFTVKVNYVVHPSLVQRFAADCEFFGRHGIPLTPRPFKGVYEGRR
HHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCC
YPEGYGSTAAAIFTQHPEAGRKTVFNFHGVPCHGGHTFLRMEPDGTVLRCPGDKTVLGNV
CCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCCCHHHHHH
LSGTVQTESGPTPCRMHRCPCQGVEHILPDAAQQDFIEGVRAYVVGDLPAAQRAFTAAHS
HHCEEECCCCCCCHHCCCCCCHHHHHHCCCHHHHHHHHHHHHEEEECCCHHHHHHHHHHH
RAPAMTQAANNAGVAAFAAGDAQAAACCFARAAADDPVTPLYAANLKLARRAAQPSPPSG
CCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCC
TENETPELSLAVNYQRTGN
CCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA