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The map label for this gene is yfbS [C]

Identifier: 78355740

GI number: 78355740

Start: 706666

End: 708489

Strand: Reverse

Name: yfbS [C]

Synonym: Dde_0693

Alternate gene names: 78355740

Gene position: 708489-706666 (Counterclockwise)

Preceding gene: 78355741

Following gene: 78355739

Centisome position: 18.99

GC content: 59.65

Gene sequence:

>1824_bases
ATGGAAGCAACCTTCATGTCCCCGCAGGTGCTCGCCGTCACGGCAATTCTGATTCTGGCCCTGTACTTCCTTGTCACGGA
AAAATGGCCCCTGCCGCTCACCGCTCTGGGCATCATCGTCGGTCTGTGTCTTGCCGAGGCGCTGGTAGGCGGCATCCTGT
CCTTCAGCAATATTTTCGGTTCGTTCGGCAGCCGCGGTCCTCTGGCGGTGGCCATGCTGTTCATTGTCAGCCGGGGGCTC
ATACGCTCCGGGGCACTGTCATTCGTGGTCAATCTGGCCGCGCGGCTTACAGGCGGCAAACCGCTGCGGCTGATGATATT
CATGGTCACCACGGTCATCACGCTGTCCGCATTCCTGAACAACACCCCCGTGGTCATTCTGTTCATCTCCATCATCCTCA
TGCTGTGCGAACGCTTCCGCCTCGTACCCTCCAAGTTCATGATCCCGCTGTCCTTCGCGTCCATTCTGGGCGGCACGTGT
ACGCTTATCGGTACTTCCACCAACATCATTCTTTCCGACATGATGGTGCTGAACAAGCAGGCCCCGCTGGGCATGTTCGA
ACTGGCCGTGGTAGGTGTGCCGCTGGCCATCATCGGCGGGCTGTTCCTTATATTTGTGGCTCCGCGGCTGCTGCCGGAAC
GCAAGTCGACATTCATCTCCAGCGGCGAACAGCAGGAAAACCTGTACCTTTCCGAAGTGGTGGTGCCCGAAGGCAGCCCG
CTGGCGGGGGTGAAAATAAGCGAAGCCTCCTCTGTACTGGGCAGTTCGGGCAGTGTTGTGGAACAGAGCAGACAGGGTGA
AATGCTTTATCTGCCCGGCAGGGAGGATCAGATTATATACGCGGGCGACCTGCTTGTGGTCAGCAGCCCGCTGGATACTC
TGACATCGCTGCTTGCCAGCCGCATCATCGTGCTGCGCCACGGCGGCGACCTGTTCCTTTCCGGCCCCAGCGACGCGCGC
CCCATAGCGGAACTTATCGTACCGCCCGCATCGCGGGTACGCGGCCGCAGGCTTTGGAACACCGCCCCCGGGCGCGACGA
AAACATCACAGTTATCGGCGTACGCCACAAGGAAGGGCACTACGCATGGCAGAAGACCAGCCAGCTGCGACTGGCAGCCG
GTGACACCCTGCTGGTACAGGGCACCCGCGCAGCCATGGACTCGCTGGCATCGGACGGCGATTTCATCATCATGGAAGAA
GCCGGTCAGAAGATTCACTACTCCAACAAGGCACCTCTGGCGCTGGGCCTGTTCCTTGCCATGGTTGTGGTTGCCTCTGT
GGGCATCATGGGCATTCTGCCCGCGGCCACCATCGCGGCTTTCCTTATGATTCTCACACGCTGCGTCAACCTGAAGGAAA
GCTTCCGTTCGCTGGACGGTGAAGTGCTGCTGCTCATCATCGCCACCATATCGCTGGGCAAGGCCCTTTCGCAGACAGGT
GCGGCAGATGTTTACGCCCACGCCTTCCTTACCCCCTTTGAAGGCGTATCGGCGCGGTTCATCCTTCTGGCCGTAGTCAC
ACTGACCGCGCTTATCACCAACTTTCTTTCCAACAACTCGGCTGCGGCGCTGCTTACACCCGTTGCCGTTTCCATAGGTA
TGGAGCTGGGAGTCGACCCCCGCGCGTTTCTTATAGGCATCGCTCTGGGTGCATCGGCATGCTATCTGACGCCCATCGGC
TATCAGACCAACCTGCTGGTATACGCCCCCGGCGGCTACAAGTTTTCGGACTTCATGCGCGTGGGGCTGCCCATGACCCT
GCTGGTCATCGTGCTGGCCACTGTCATGATTCCCATGTTCTTCCCCTTTACGCCCCTGCAGTAG

Upstream 100 bases:

>100_bases
GCCTGCCAGTATCTGCCCAAACCGTGCGATGCCGACGAAATCGTCTCCATAATAACCCGCATGCAAAAAAACTGACCAAG
GTATCAATGAGGAGTTTCAC

Downstream 100 bases:

>100_bases
GAGGACCGAGCCATGATGATGCAGGATACGGTACATGCCATTGTTGTGGATGATCAGGAAAAGCTGGCGGAAGTGATGAC
CAAGCGCCTGAAAAAGCGCG

Product: TrkA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MEATFMSPQVLAVTAILILALYFLVTEKWPLPLTALGIIVGLCLAEALVGGILSFSNIFGSFGSRGPLAVAMLFIVSRGL
IRSGALSFVVNLAARLTGGKPLRLMIFMVTTVITLSAFLNNTPVVILFISIILMLCERFRLVPSKFMIPLSFASILGGTC
TLIGTSTNIILSDMMVLNKQAPLGMFELAVVGVPLAIIGGLFLIFVAPRLLPERKSTFISSGEQQENLYLSEVVVPEGSP
LAGVKISEASSVLGSSGSVVEQSRQGEMLYLPGREDQIIYAGDLLVVSSPLDTLTSLLASRIIVLRHGGDLFLSGPSDAR
PIAELIVPPASRVRGRRLWNTAPGRDENITVIGVRHKEGHYAWQKTSQLRLAAGDTLLVQGTRAAMDSLASDGDFIIMEE
AGQKIHYSNKAPLALGLFLAMVVVASVGIMGILPAATIAAFLMILTRCVNLKESFRSLDGEVLLLIIATISLGKALSQTG
AADVYAHAFLTPFEGVSARFILLAVVTLTALITNFLSNNSAAALLTPVAVSIGMELGVDPRAFLIGIALGASACYLTPIG
YQTNLLVYAPGGYKFSDFMRVGLPMTLLVIVLATVMIPMFFPFTPLQ

Sequences:

>Translated_607_residues
MEATFMSPQVLAVTAILILALYFLVTEKWPLPLTALGIIVGLCLAEALVGGILSFSNIFGSFGSRGPLAVAMLFIVSRGL
IRSGALSFVVNLAARLTGGKPLRLMIFMVTTVITLSAFLNNTPVVILFISIILMLCERFRLVPSKFMIPLSFASILGGTC
TLIGTSTNIILSDMMVLNKQAPLGMFELAVVGVPLAIIGGLFLIFVAPRLLPERKSTFISSGEQQENLYLSEVVVPEGSP
LAGVKISEASSVLGSSGSVVEQSRQGEMLYLPGREDQIIYAGDLLVVSSPLDTLTSLLASRIIVLRHGGDLFLSGPSDAR
PIAELIVPPASRVRGRRLWNTAPGRDENITVIGVRHKEGHYAWQKTSQLRLAAGDTLLVQGTRAAMDSLASDGDFIIMEE
AGQKIHYSNKAPLALGLFLAMVVVASVGIMGILPAATIAAFLMILTRCVNLKESFRSLDGEVLLLIIATISLGKALSQTG
AADVYAHAFLTPFEGVSARFILLAVVTLTALITNFLSNNSAAALLTPVAVSIGMELGVDPRAFLIGIALGASACYLTPIG
YQTNLLVYAPGGYKFSDFMRVGLPMTLLVIVLATVMIPMFFPFTPLQ
>Mature_607_residues
MEATFMSPQVLAVTAILILALYFLVTEKWPLPLTALGIIVGLCLAEALVGGILSFSNIFGSFGSRGPLAVAMLFIVSRGL
IRSGALSFVVNLAARLTGGKPLRLMIFMVTTVITLSAFLNNTPVVILFISIILMLCERFRLVPSKFMIPLSFASILGGTC
TLIGTSTNIILSDMMVLNKQAPLGMFELAVVGVPLAIIGGLFLIFVAPRLLPERKSTFISSGEQQENLYLSEVVVPEGSP
LAGVKISEASSVLGSSGSVVEQSRQGEMLYLPGREDQIIYAGDLLVVSSPLDTLTSLLASRIIVLRHGGDLFLSGPSDAR
PIAELIVPPASRVRGRRLWNTAPGRDENITVIGVRHKEGHYAWQKTSQLRLAAGDTLLVQGTRAAMDSLASDGDFIIMEE
AGQKIHYSNKAPLALGLFLAMVVVASVGIMGILPAATIAAFLMILTRCVNLKESFRSLDGEVLLLIIATISLGKALSQTG
AADVYAHAFLTPFEGVSARFILLAVVTLTALITNFLSNNSAAALLTPVAVSIGMELGVDPRAFLIGIALGASACYLTPIG
YQTNLLVYAPGGYKFSDFMRVGLPMTLLVIVLATVMIPMFFPFTPLQ

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=623, Percent_Identity=26.4847512038523, Blast_Score=186, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64605; Mature: 64605

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS01271 NA_SULFATE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATFMSPQVLAVTAILILALYFLVTEKWPLPLTALGIIVGLCLAEALVGGILSFSNIFG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFGSRGPLAVAMLFIVSRGLIRSGALSFVVNLAARLTGGKPLRLMIFMVTTVITLSAFLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
NTPVVILFISIILMLCERFRLVPSKFMIPLSFASILGGTCTLIGTSTNIILSDMMVLNKQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCC
APLGMFELAVVGVPLAIIGGLFLIFVAPRLLPERKSTFISSGEQQENLYLSEVVVPEGSP
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCC
LAGVKISEASSVLGSSGSVVEQSRQGEMLYLPGREDQIIYAGDLLVVSSPLDTLTSLLAS
CCCEEECCHHHHHCCCCCHHHHCCCCCEEEECCCCCCEEEECCEEEEECCHHHHHHHHHH
RIIVLRHGGDLFLSGPSDARPIAELIVPPASRVRGRRLWNTAPGRDENITVIGVRHKEGH
HEEEEEECCCEEEECCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
YAWQKTSQLRLAAGDTLLVQGTRAAMDSLASDGDFIIMEEAGQKIHYSNKAPLALGLFLA
CHHHCCCCEEEECCCEEEEECHHHHHHHHCCCCCEEEEECCCCEEECCCCCCHHHHHHHH
MVVVASVGIMGILPAATIAAFLMILTRCVNLKESFRSLDGEVLLLIIATISLGKALSQTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
AADVYAHAFLTPFEGVSARFILLAVVTLTALITNFLSNNSAAALLTPVAVSIGMELGVDP
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
RAFLIGIALGASACYLTPIGYQTNLLVYAPGGYKFSDFMRVGLPMTLLVIVLATVMIPMF
HHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
FPFTPLQ
CCCCCCC
>Mature Secondary Structure
MEATFMSPQVLAVTAILILALYFLVTEKWPLPLTALGIIVGLCLAEALVGGILSFSNIFG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFGSRGPLAVAMLFIVSRGLIRSGALSFVVNLAARLTGGKPLRLMIFMVTTVITLSAFLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
NTPVVILFISIILMLCERFRLVPSKFMIPLSFASILGGTCTLIGTSTNIILSDMMVLNKQ
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCC
APLGMFELAVVGVPLAIIGGLFLIFVAPRLLPERKSTFISSGEQQENLYLSEVVVPEGSP
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEEEEECCCCCC
LAGVKISEASSVLGSSGSVVEQSRQGEMLYLPGREDQIIYAGDLLVVSSPLDTLTSLLAS
CCCEEECCHHHHHCCCCCHHHHCCCCCEEEECCCCCCEEEECCEEEEECCHHHHHHHHHH
RIIVLRHGGDLFLSGPSDARPIAELIVPPASRVRGRRLWNTAPGRDENITVIGVRHKEGH
HEEEEEECCCEEEECCCCCCHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCC
YAWQKTSQLRLAAGDTLLVQGTRAAMDSLASDGDFIIMEEAGQKIHYSNKAPLALGLFLA
CHHHCCCCEEEECCCEEEEECHHHHHHHHCCCCCEEEEECCCCEEECCCCCCHHHHHHHH
MVVVASVGIMGILPAATIAAFLMILTRCVNLKESFRSLDGEVLLLIIATISLGKALSQTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
AADVYAHAFLTPFEGVSARFILLAVVTLTALITNFLSNNSAAALLTPVAVSIGMELGVDP
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC
RAFLIGIALGASACYLTPIGYQTNLLVYAPGGYKFSDFMRVGLPMTLLVIVLATVMIPMF
HHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
FPFTPLQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]